mRNA_E-siliculosus-1a_F_contig1089.607.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1089.607.1
Unique NamemRNA_E-siliculosus-1a_F_contig1089.607.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1089.607.1 vs. uniprot
Match: A0A6H5JM01_9PHAE (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM01_9PHAE)

HSP 1 Score: 525 bits (1352), Expect = 1.040e-183
Identity = 312/340 (91.76%), Postives = 319/340 (93.82%), Query Frame = 1 
Query:  109 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGPSSNVHLHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDHVQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXXXXXXANGQNGRNKELAERQQKGAAQTSARKRRMLGQDSNSSGVDGXXXXXXXXXXXXELPVEMRNLVSSMEGGFDG 1128
            MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRA+RTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSG SSN+ LHYTLLPLEVLVRTRGPQFHSHAA+TFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXD+VQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPA +                ANGQNGRNKELAERQQKGAAQ SARKRRMLGQDSNS+GVDGXXXXXXXXXXXXELPVEMR+LVSSME GFDG
Sbjct:    1 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRAERTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGRSSNIRLHYTLLPLEVLVRTRGPQFHSHAAKTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDNVQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPADNDSKGKSASA-------ANGQNGRNKELAERQQKGAAQRSARKRRMLGQDSNSNGVDGXXXXXXXXXXXXELPVEMRSLVSSMEEGFDG 333
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BLAST of mRNA_E-siliculosus-1a_F_contig1089.607.1 vs. uniprot
Match: D7FMS5_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS5_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 3.160e-171
Identity = 293/299 (97.99%), Postives = 294/299 (98.33%), Query Frame = 1 
Query:  109 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGPSSNVHLHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDHVQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXXXXXXANGQNGRNKELAERQQKGAAQTSARKRRMLG 1005
            MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKT TKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSG S N+ LHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDHVQEVT ESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXXXXXXANGQNGRNKELAERQQKGAAQTSARKRRMLG
Sbjct:    1 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKTITKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGRSGNIRLHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDHVQEVTPESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXXXXXXANGQNGRNKELAERQQKGAAQTSARKRRMLG 299
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1089.607.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JM01_9PHAE1.040e-18391.76DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
D7FMS5_ECTSI3.160e-17197.99DNA-directed RNA polymerase III subunit RPC3 n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1089contigE-siliculosus-1a_F_contig1089:24430..32675 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1128
Model size1130
Exons9
Ec32 orthologEc-21_000340.1
Ec32 ortholog descriptionRNA polymerase III subunit RPC82-related, helix-turn-helix
Hectar predicted targeting categoryother localisation
BRITEbr01611,ko00000,ko00001,ko00002,ko03021
Best eggNOG OGNA|NA|NA
Best tax levelPythiales
COG Functional cat.K
EggNOG OGs1MFAR@121069,KOG2587@1,KOG2587@2759
EggNOG free text desc.Source PGD
GOsGO:0000428,GO:0001817,GO:0001819,GO:0002682,GO:0002684,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005666,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006359,GO:0006383,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009304,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0030880,GO:0031323,GO:0031326,GO:0031347,GO:0031349,GO:0031974,GO:0031981,GO:0032479,GO:0032481,GO:0032648,GO:0032728,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0042797,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045088,GO:0045089,GO:0046483,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0051171,GO:0051239,GO:0051240,GO:0051252,GO:0055029,GO:0060255,GO:0061695,GO:0065007,GO:0070013,GO:0071704,GO:0080090,GO:0080134,GO:0090304,GO:0097159,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1903506,GO:1990234,GO:2000112,GO:2001141
KEGG ModuleM00181
KEGG Pathwayko00230,ko00240,ko01100,ko03020,ko04623,ko05169,map00230,map00240,map01100,map03020,map04623,map05169
KEGG ReactionR00435,R00441,R00442,R00443
KEGG koko:K03023
KEGG rclassRC02795
Preferred namePOLR3C
Seed eggNOG ortholog65071.PYU1_T012877
Seed ortholog evalue5.2e-07
Seed ortholog score62.4
Taxonomic scopeEukaryota
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927588.85419-CDS-E-siliculosus-1a_F_contig1089:24431..245541622927588.85419-CDS-E-siliculosus-1a_F_contig1089:24431..24554Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 24432..24554 -
1696318599.8741057-CDS-E-siliculosus-1a_F_contig1089:24431..245541696318599.8741057-CDS-E-siliculosus-1a_F_contig1089:24431..24554Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 24432..24554 -
1622927588.8647742-CDS-E-siliculosus-1a_F_contig1089:26486..266641622927588.8647742-CDS-E-siliculosus-1a_F_contig1089:26486..26664Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 26487..26664 -
1696318599.8923006-CDS-E-siliculosus-1a_F_contig1089:26486..266641696318599.8923006-CDS-E-siliculosus-1a_F_contig1089:26486..26664Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 26487..26664 -
1622927588.8748126-CDS-E-siliculosus-1a_F_contig1089:27549..276641622927588.8748126-CDS-E-siliculosus-1a_F_contig1089:27549..27664Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 27550..27664 -
1696318599.9012537-CDS-E-siliculosus-1a_F_contig1089:27549..276641696318599.9012537-CDS-E-siliculosus-1a_F_contig1089:27549..27664Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 27550..27664 -
1622927588.8849726-CDS-E-siliculosus-1a_F_contig1089:28498..286041622927588.8849726-CDS-E-siliculosus-1a_F_contig1089:28498..28604Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 28499..28604 -
1696318599.9100392-CDS-E-siliculosus-1a_F_contig1089:28498..286041696318599.9100392-CDS-E-siliculosus-1a_F_contig1089:28498..28604Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 28499..28604 -
1622927588.8973525-CDS-E-siliculosus-1a_F_contig1089:29251..293831622927588.8973525-CDS-E-siliculosus-1a_F_contig1089:29251..29383Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 29252..29383 -
1696318599.920867-CDS-E-siliculosus-1a_F_contig1089:29251..293831696318599.920867-CDS-E-siliculosus-1a_F_contig1089:29251..29383Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 29252..29383 -
1622927588.9147897-CDS-E-siliculosus-1a_F_contig1089:30240..303691622927588.9147897-CDS-E-siliculosus-1a_F_contig1089:30240..30369Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 30241..30369 -
1696318599.9344692-CDS-E-siliculosus-1a_F_contig1089:30240..303691696318599.9344692-CDS-E-siliculosus-1a_F_contig1089:30240..30369Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 30241..30369 -
1622927588.9329839-CDS-E-siliculosus-1a_F_contig1089:30659..307911622927588.9329839-CDS-E-siliculosus-1a_F_contig1089:30659..30791Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 30660..30791 -
1696318599.9419625-CDS-E-siliculosus-1a_F_contig1089:30659..307911696318599.9419625-CDS-E-siliculosus-1a_F_contig1089:30659..30791Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 30660..30791 -
1622927588.9519682-CDS-E-siliculosus-1a_F_contig1089:31594..317321622927588.9519682-CDS-E-siliculosus-1a_F_contig1089:31594..31732Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 31595..31732 -
1696318599.9494076-CDS-E-siliculosus-1a_F_contig1089:31594..317321696318599.9494076-CDS-E-siliculosus-1a_F_contig1089:31594..31732Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 31595..31732 -
1622927588.966824-CDS-E-siliculosus-1a_F_contig1089:32600..326751622927588.966824-CDS-E-siliculosus-1a_F_contig1089:32600..32675Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 32601..32675 -
1696318599.957356-CDS-E-siliculosus-1a_F_contig1089:32600..326751696318599.957356-CDS-E-siliculosus-1a_F_contig1089:32600..32675Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1089 32601..32675 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1089.607.1prot_E-siliculosus-1a_F_contig1089.607.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1089 24432..32675 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1089.607.1

>prot_E-siliculosus-1a_F_contig1089.607.1 ID=prot_E-siliculosus-1a_F_contig1089.607.1|Name=mRNA_E-siliculosus-1a_F_contig1089.607.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=376bp
NPSTCSLALQRLARVCSAHLAKECERCAGRGHHPIAMAFLLESQMPLVAL
ESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMG
VSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGPS
SNVHLHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTL
PDVKEELLRREGEAARARKALANPEDEDEDDEDDHVQEVTSESIQKSFEE
LVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSGGGGGGNDSKSK
SASAANGQNGRNKELAERQQKGAAQTSARKRRMLGQDSNSSGVDGGNGDG
GDSDDDDELPVEMRNLVSSMEGGFDG
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mRNA from alignment at E-siliculosus-1a_F_contig1089:24430..32675-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1089.607.1 ID=mRNA_E-siliculosus-1a_F_contig1089.607.1|Name=mRNA_E-siliculosus-1a_F_contig1089.607.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=8246bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1089:24430..32675- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AATCCATCTACCTGTAGTCTAGCCTTGCAGCGTCTCGCTCGCGTCTGCTC
GGCGCACCTCGCGAAGGAGTGTGAGGTGAGTCATGATGCTGATGTACGAA
GCTTGAACAGTGGGCATACCGCAGTAAACCGTTGCGTGGACTGCCGTAGA
CACAGCGGCTGCCGCAAGTTTTGAGAGATCCCAATATTTGTTGTACAGCA
GCAGTAGGTGCATGTTGCTGCGGCGGGCTGCTGTAGCGTGCGGGACAGGC
GCAGCTCTGAGGATATAGAGGGAAATTTCCTTCTTGCATCGACCTTGCAC
GCCTTTCGTCGCATTGCGCTCCTGGTGCTACGCATTCATACCCGCTAGAA
GTGCCCCCGGCCGGTGTCCCCCCAAAGAGGGCTATTGCGCCGCATTTCAC
TCATCTTCACCTTCTTGCCCTGCTGGCTGTTTAGCAGCGGTTGTGCGGCG
GTGGTGCTATGGCCGTCAAGCGTGACGTATCATAGGCTTCCAGGGGCTAG
TGAGGATGAAACTTGTACTTTCACAACCGCGGTGGGATCATATCCGAAAC
AAAGCTGGTCGATGCACGGTGCCTGCCTACAAGCAGGGTATTATTGTGTC
ACAACAGCAGTCAGGACAAAAGATCGCTCCGATCGGCTGGGTGAGACGGA
GGGATCGTGAGTGGCTGCAGTAATCGTGAGGCTCCGCACTCCAGACTCCA
GACCACTTGGCGATCCGACGGTAGCAGGCAGTTCCCTGCCTCTGCCCTGA
CAAAATGCCATTGGCTGCTGTTTCTTTCTAGATGCACACTCAGGACATTG
CTCCTTGCCTCTCCGCATAGACATATCCCGTTAATACTGCATACATCCAT
GCGACGAAGTGCGTTCTTTTGGTGTGTGCCCTAGCACCTGCTGTGTTGAT
GCAAACATACGTGCGTTGACGGTTGTTGGTGACCCCCCCCCAGCGGTGCG
CAGGCCGGGGCCACCATCCCATCGCCATGGCTTTTCTTTTGGAGAGCCAG
ATGCCGCTGGTAGCGCTGGAGAGCTCGAGGCGGAAGCTGGTGCTGAGCGT
CATCGAGGAGTACCACGGGCCCATCGTTTCGGTAAGTGGAGGGTTATGGT
TTTCCAAGTTTCAAGACTTTATTGTGCGTGTTCCGACTCAAACGCCTTGC
CAACACGTCCAGATTGCTGTAGTAGTAGTAGTAGTAGTTGTTGTTGTTGT
TGCTGTTGCTGTTGTTGAGTAGTTCACTTGAAACTTGCTGTTTTCGAGCG
TCTATCCAACATCACGTTTGCACCAACACTCTCGCTACGACAGGCGTGTG
GACGTCGTGAGTCGTGCACACGCGCACAACCCAGCCTGTCCTCTGGCGTG
GTCGTTAGTTCTCTTCGTCTTTGTCAAGTCGTTGGTTGTGGTCGTCGAAT
GTACGACCTTGCTTGTGTCAGCTTGCCGCAACTCCAACCGTTCCATGCGA
GCGGTTCAAGCGATATATCCTCTGTTGTAGTCTATTATGTGTCCGTGCGC
AATGTAGGATATTTTAGACCCGTTACGGTGCTGCATCGCAAAGAGCAAGT
CTTGGTACCAACGGCCAACAGCAGCGTTGGCTCTTTACGTCTGGCACCAG
CGCACGTCGGAGGGTTTGCACGAAAAGTTGAGCTCAAGCCACGGAATGAC
GAACAGATTTCGCCCCGAGCACCAGCTCTGTGGGTTTCCCGTGAAACTGT
GTGAATTTGAATCCCGTCCATTTCGTCGGAGGCGCTCTTGCCGTGCGATT
GTCTACGTAGTGATATACATATGTACCATTCCACCCTACACATCATGCCC
ATGGCGTACGTAGAATATCACTCCAACGCTGCTGCTGCTGCTTGCTGCTT
GCTGCTGCTGCTGCTGGTTCGTTTGCTGCTGCAGACCGTGGCGGAGGTAC
TGATGCGAGCCGACCGCACGACGTTGGCGGAGCTGACTCGACTGGTGCTG
AGAGACCAAGGGATCATGGGGGTCTCCAGGGCGGGGAAGACGAGAACTAA
AGTCACTGCCGCCAATGTGAGAAGCAGAGGCCGGCCGACCGTGCAGCAGT
AAACGCTACCTGTACCGTTGACCGTTTTGTTTTACACAAGAACCCCCCCC
CCCCCCCCGGCGACAGCTAGGAGAGAGAGGCTGCTGGCTGTGGTAGTGGT
GGTGACGCCCTACTCGTCTGTAGTCAGCCGACCGCGTTGCAGGTGTACAT
TTTGTTCAACGGGATGGTATTATCAATGATACACGCGTTACCGCACGCGC
ACTAGAGTTTCTGTGCTTGAGTCTGACGCCAACCTGCGGCTGTGTCCTGT
GGGCAGGTGAAGGAGTCGCTGCTGATCATGACGCAGCACAACATGGTGGC
CGCCGCCATGCCGACTGAGAAGGAGATGAGGAAGGCCAGAGCCAGCAGCT
CTGGACCCTCCAGCAACGTCCACTTGCACTACACGGTGAGAATCAAACAA
TCAGACAAAAACAGACCAGTCGGTCATGTCTGCGGCTGCTGCTGCTGCTG
CTGCTGCACATCTGCTGCTGTTGCGCACCTGCTGCTATTTCTGCTGCTTC
ATGTGCAGCTTTTCAACAGGGGGGGGCGAGTCGGTCGTACCGATGTGTGT
CATATCCCTCGTACGTACCTTGTATCGATGTGCGTCACGTCCCTCGTACC
TGGGGTGTTCGGGTAGCTAAATGTGGTGCCTGCTGTTGCTGTTGGTGCAC
CGCGTTGGGCTTGTCAGTCTCCACCATTTACACTGTAGGGTTAGCCCTAG
GAAAGATCCCCAGTTCCCCACGTCCATCCCATGCTGGCTTAAGCCGGCTT
GTATACCGCCTCCTGCGGGTGCTCTTGGTGATTCTTACCCTTTTCCATCC
ACTATGCAACGCTCTTTGTCTTGGACAATGCCGAGGATGACAGCAAAGAG
ATCGACAATGCTCCATTTCGACACATTTCAGCAGAAAAGTTGGCGGGATT
TTCTTTTCGGCTAATCGCGGGATGGAAAGTCTTTGAAAAATGGATATAAG
TGTGTTATATTGTGTGGATATTCCATAAGACGTCGCGTATCTCAGGGGGG
TCGGAAATGATGCTTCAGAACAAACGACGATCACCGTCGTAGTGTCTGTC
TCCCCCCCCTCTCCTTGCTGCGCTAAGAGGCACCGGCGTTCAGTTGTTAG
GAGGGTCTCACCCGCATACCAATGGCCGAATGCCGTTGCTGCGTTGTCGA
TATTTACCGCTGGTAGTGGTGCTACTGCTGTATGTGCCGCTGTCGCAACC
GCCGCTGCCGTGCTTCCTCTTCTTCTGTCTGCGTCGTACCAGCTACTACC
GCTGGAGGTGCTCGTGAGGACGAGGGGACCACAGTTTCACTCACACGCAG
CCAGGACGTTTTCGAAGGTCGCTGGTTTAGTGGTGGACTGTTTCTTGAGA
CACGGGAGGAGAACCCTGCCTGATGTAAGTGAGCCACGGCCTGAACACAG
CGCCGGCTGATGTACATAATATGCCTATTTCTGAAGATCTCTGTTGCATG
CGCCGACGGTTCTGGTTGTGTCGGTAGCAGGAGTTTTGTCTGTTGGGGCG
GATGGAGAGTGTTGTGGTTGTTTTGTCCTGTCTGGGTATTATACGCTGCA
TTCTATGCACCACTGCTGGTATATGGGGAAGGTGAGAAACAAAACACCGA
CAATTCGTTTGTTTCCTGGGTGATGCCTTCTGGTGCATCAAACATGTTCC
GAAGGTGTACATCATGTAGACTGTTTCCCGGAATACATGGGACGATAGCA
CACATACGACACCGGCTGCTGGAGAGGCACCGAGGACAGCTAAGAAGTTG
ACCACGCTCATGTATCATGTATGGATGTAATGTGTCTGCTTCAGCACGTG
ACGCGGCCAGGTCTATCCGTGCGTGTCGCCGAGAGATGAACTGAGATGAT
GAATCATGGTGTATGTGTGTTCCGTGTGTTTGTTGCAACATGACAGCACG
CAAACGATCCACACCCCCATGGTCCGAACACTCTCAGTACTCTCCGTACT
GCTGTAAATAGCATGGCAGACAGGTGTCTGAAAACGTAACACAAGACGAC
TGTAATATCAACACTACACAGGTTAAGGAGGAGCTTCTGAGAAGAGAAGG
CGAAGCGGCCAGGGCGCGAAAGGCTCTTGCCAACCCGGAGGACGAGGACG
AGGATGACGAGGACGATCATGTCCAGGGTAAGAGATGTCATGTTTATAGA
CGGACGTCATCATTGGTCCACGGCAAGAAATGTTTGTAGATAGGCATCAT
ATGCTGCTGCAGCGGCCTACGGCCGTAGCGTGCGGAAGGTCGTGCGTTTG
TTGGTGAACGGGTTGCGTCAGTGACCGCGTGCGGGTCGAAGGTTGTGTGG
CCGTTTATTCTACGAGTGGTCAGTTCCTGTAGCCAACTGTGGTTTCGCAA
GGTTTGTGATGGTTGAGGGACTTTTGAGTGTTTGTGAGTACTGTTACTTG
TTTTTGCCGTGTGTTGGTGGATTCAACTAGTTTGTGTTTTTGACTGACAA
CCGTCGTCCCGGGTTAAAGCAGTCGCAGCAGAGTTAACTTTTTCATGTTT
TGCGCAACGATGCTGGTGAGGGTACGTATGTGTAAAGGTAACCGTTTAGC
GGTGGAGTGGCTAGATATCCACCTCGATCAAGGAAAAACCTGAACAACAT
TTTCTTGAGCATGAGAAGTGTTTCTTCTAGAATACTCTTTTGGTACCAGG
CTCCTAGTATCGCTTTAGCCCGCGGCCGTGCCCTCGCTGTCCGCTCGCGT
GCCATGTCAGTGTTTGTGGTGCATATATGATGATGTAATGAAAAAGTCTG
TTGTATTGTCACGAAATTACATGTGGCAGAGAGCTTCTGTGCTGTACCGT
GCTGAGTGTTGTGCTGAAAAATTGGCTAGAAATATATACCAATTTTTTTT
TTCTCATTTTCTCTGTCGTATGATTTTGTGGATCCTATCTAAGATGCTGT
TGGCCGGCGTGCGTGATCTATCACGCGTGCGTGTGTGTGTGTCCGCATGT
GTACATGTCAGAGGTGACGTCTGAGAGCATCCAGAAGAGCTTTGAGGAGC
TGGTAATGAAAAAATACATCGATAAGGTGCCCAAGCTCGACCTCGTCACA
CCTACCGTCGAGCCGGAGAAGGCAAAGTAAGTTACCATGCCACACAAGAC
ACAAGACACCAACTGTTGTTGTCGTTGTTGTTGGTGGAGGTGGCGGTGTC
GTTGTGGAACGTACAACATCGAAATCTTATTCTTCCTATTGCGCCCCGGA
AAACTGCCCGGCTAGGCTGCTAACCCTCTTGGTAGAATTCGTAAATGTCG
TAGATCTCGTAGATCCCGTAGATGCAAGAAGCTAACCCTCTTGGTAGAAA
TAATAAATCTCGTAGAACCCTCTTCGTAGACATCATAAATCTCGTAAATC
CCGTAGAAGCAAGAAGCTAACCCTCCTCGTAGACATAATAAATTTCGTAG
ATCCCGTATAGATGAAAGAACAATGATACCAAACATGACCAGTTTCGCGG
CGTGCGGAGTGAGTTGGTGTTCGCATATGTACACTTTCCGACGTACGTAC
GAGGCCTTAAAACGATTTGATTCGAGCAATTCGGACTTGACGAGTTGATG
GCCGTGCTATCGTACGCCTGAACGTTTCCCTCGCCAACCTTTCCCTCACA
CCCACCCAAAGAAACACCAATACGTAAATGTAGCCATACGTATAGTGCAC
AGAAACACGCACGTGCAGCTTGTGCCGTGAAGGCACCGCTGTCGATCTGA
CTCTACCACGGTACTGCTGTACTGGAAGAATTGCCATTTTGCGGCCTCTT
CGTGAGAACGCTGTCATAGAGGCGCGCTGTGTGATACAAGTATACTGTAG
CCGGATAGAGCATGTGTAAGGTCGTGCCGTGTTTGCTTTTGTTTGCATCT
CTAGAAAGCCGTCGATGACGCTCGGAGCACCAACCGGCTGTGTGATGCAC
GGTCGCCGTGTAGAGAGCATATTTGAGGCCATGCCGTATTTGCTTTTATT
TCCATCTCTAGAAAGCCGTCGATGACCTTCGGGGCACCAGCCGGCAGCGG
TGGCGGCGGCGGCGGCAATGACAGCAAGAGCAAGTCGGCGTCGGCAGCCA
ATGGGCAAAACGGAAGGAACAAGGAGCTGGCTGAGCGGCAGCAGAAGGGA
GCTGCGCAGACGTCGGCAAGGAAGCGCAGGATGCTCGGGGTATGTGTGTT
GTGTATTACATTACACCGAAGCATGTGACAAGATGTCCTGTCGTCTTACT
GTTGGGGTTATGTGAGGGAAGGGTTAAGAGTGCCCAACGTTAAACCCAAC
AATACCCCCCCAACGGCACCACTCTCTTTGTTGACTCCACTAGGGGGCGT
GACACTGCGCAGAGTACCGTAAGAGTTGGAGGGAGAGATAGCACCCCCCC
TAGACCGATGTTCAAAGCTCGATTGCTCCACAACCAAGATTGTCTGTACC
GTACCGTATACCGTACCGTGGTATTCCGTAACAGTCGGAGAGATGGCACC
ATCACCTAGACCGATGTTCAAAGCTCGATTTCACCACAACCAAGCTTGTG
CTAACACCAATAGTCCAATGGTGTTTCTGGAAACATCTCGTCGAGGGCTT
TCCGTAGACGTATCGGGTTATTTCAACACCCACTTGGTTGTGGAGCAATC
GAGCTTTGAAAGTCGGTGTAGAGGGGTGCCACCTCTCCGCCTATTACGGT
ATACCACGGTACGGTATACGGTACGGTACAGACAATCTTGGTTGTGGAGC
AATCGAGCGTTGAAAATCGGTCTGGGGGGTGTGTCATCTCTCCCTCCGCC
TCTTGCGGTAGGTAGAGGCAACGGCACATGTGTTCGACAACAACACCAAC
GCCGCCGAAACGAAAGGCTTAAGGCTCGGGAGGGTAGCGTGCGGTGCTGA
TACTCAGTGCGGCCTCGTCGCACGCAAGACGAACGGTCTTGAAGAGCTCA
GAACAGTTCTGGAGCGTCAAAACAAAAACGTCACCGCACTGCCAAGAACT
TTATTTTTTTTGGCGATACGGGGTGTCTTTTGAATTTGAAGACCTGGCGT
GTTTTTAATTTGAAGACATGTTGTGAGATCTTGCAAGGCGTCCATGTCCC
ATGCGATAGGCAGAACGTTAATATCAGCACCTCCAATCCCTATCACTCTA
GCGGGGGGGGGTGTAACGTGAAGAGGGCAAGCAATGTGCGTACGCGAACT
TCCGAGCCTTGAGCCTTTCGGCAGCATTGGTGATTTCGTCGAGAACGCTG
CTGTTGTCTCTCACTACACTCTGCGCTGTGCGCTCTCCGTCAGCATGATA
TGAGGATATGGCCGATGCACAAGATGGGGATTTTTTCACTTTAATTTTTA
ACAATTGTTTTTTCACCTTCATTTCGCCTCCTTTTTCGTATGTCCCGGTG
GTCTAAATAGTGGTATCCTCGACAACCGCTACCCGCAAAGCGAATCCCCA
TAAGGTAAAAAATGTACAACTTTACGGGTGAAACCGAGAACAAAATTGAA
AAGCTCTCGTGAGTACCAAACTTCGACGTTAGCACCGTTGACGAGGGAAA
GGGACGGCTGGACCCTTCTCGCGATAAAAAGAAAAATTCAGCAAGCACCG
CAGGAGGAAGGTGGGGCACGAAAATAAAAAGAAGAAACAAGCCCCGGTGT
TTACCCCCTCCTGTGTGACCCTGGATGGTTGTAGTTGTGCGAAAAAATAC
AAAAATACGCTGAAAAGTGTACTCTACATACACTGAATAGTGTAGTACAC
GCTCACCACGAAAAATGGGAGGGCTGTCGCCAAAGAAAATAGGACGAAGA
CACACAACAATATATTTCGCCTCCTTTTTTATCACGGATGTCCCCTTCTA
TTGGGTAGCATAATGGTTGGCCTGTGGCCTCGAAAGGCGTCCGCGTCTGT
TTGGCAGGCACGGACGTTTTGAGGTACTGGCACAGAACAGACACCGGAAC
GGTTTTGAATGTGTGAAGACAAGAACATCATTTACCTCGACGTCGATATA
TATCCCCATCCACATCTCCGAACTCCGTACCCCATCCCCTCTCATCTTTT
ATTGTTCTTATTTTATTACTCACCTTGTTTCCTGCCCCACTGCTGTGACC
GTAATGGCGGCGGCGGTGCAGCAAGACTCCAACAGCAGCGGAGTGGACGG
AGGCAACGGAGATGGCGGCGATTCCGACGACGACGACGAGCTCCCGGTAG
AGATGCGGAACCTGGTGAGCAGCATGGAGGGAGGCTTCGACGGCGC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1089:24430..32675-

>mRNA_E-siliculosus-1a_F_contig1089.607.1 ID=mRNA_E-siliculosus-1a_F_contig1089.607.1|Name=mRNA_E-siliculosus-1a_F_contig1089.607.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2256bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1089:24430..32675- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
AATCCATCTACCTGTAGTCTAGCCTTGCAGCGTCTCGCTCGCGTCTGCTC
GGCGCACCTCGCGAAGGAGTGTGAGAATCCATCTACCTGTAGTCTAGCCT
TGCAGCGTCTCGCTCGCGTCTGCTCGGCGCACCTCGCGAAGGAGTGTGAG
CGGTGCGCAGGCCGGGGCCACCATCCCATCGCCATGGCTTTTCTTTTGGA
GAGCCAGATGCCGCTGGTAGCGCTGGAGAGCTCGAGGCGGAAGCTGGTGC
TGAGCGTCATCGAGGAGTACCACGGGCCCATCGTTTCGCGGTGCGCAGGC
CGGGGCCACCATCCCATCGCCATGGCTTTTCTTTTGGAGAGCCAGATGCC
GCTGGTAGCGCTGGAGAGCTCGAGGCGGAAGCTGGTGCTGAGCGTCATCG
AGGAGTACCACGGGCCCATCGTTTCGACCGTGGCGGAGGTACTGATGCGA
GCCGACCGCACGACGTTGGCGGAGCTGACTCGACTGGTGCTGAGAGACCA
AGGGATCATGGGGGTCTCCAGGGCGGGGAAGACGAGAACTAAAGTCACTG
CCGCCAATACCGTGGCGGAGGTACTGATGCGAGCCGACCGCACGACGTTG
GCGGAGCTGACTCGACTGGTGCTGAGAGACCAAGGGATCATGGGGGTCTC
CAGGGCGGGGAAGACGAGAACTAAAGTCACTGCCGCCAATGTGAAGGAGT
CGCTGCTGATCATGACGCAGCACAACATGGTGGCCGCCGCCATGCCGACT
GAGAAGGAGATGAGGAAGGCCAGAGCCAGCAGCTCTGGACCCTCCAGCAA
CGTCCACTTGCACTACACGGTGAAGGAGTCGCTGCTGATCATGACGCAGC
ACAACATGGTGGCCGCCGCCATGCCGACTGAGAAGGAGATGAGGAAGGCC
AGAGCCAGCAGCTCTGGACCCTCCAGCAACGTCCACTTGCACTACACGCT
ACTACCGCTGGAGGTGCTCGTGAGGACGAGGGGACCACAGTTTCACTCAC
ACGCAGCCAGGACGTTTTCGAAGGTCGCTGGTTTAGTGGTGGACTGTTTC
TTGAGACACGGGAGGAGAACCCTGCCTGATCTACTACCGCTGGAGGTGCT
CGTGAGGACGAGGGGACCACAGTTTCACTCACACGCAGCCAGGACGTTTT
CGAAGGTCGCTGGTTTAGTGGTGGACTGTTTCTTGAGACACGGGAGGAGA
ACCCTGCCTGATGTTAAGGAGGAGCTTCTGAGAAGAGAAGGCGAAGCGGC
CAGGGCGCGAAAGGCTCTTGCCAACCCGGAGGACGAGGACGAGGATGACG
AGGACGATCATGTCCAGGGTTAAGGAGGAGCTTCTGAGAAGAGAAGGCGA
AGCGGCCAGGGCGCGAAAGGCTCTTGCCAACCCGGAGGACGAGGACGAGG
ATGACGAGGACGATCATGTCCAGGAGGTGACGTCTGAGAGCATCCAGAAG
AGCTTTGAGGAGCTGGTAATGAAAAAATACATCGATAAGGTGCCCAAGCT
CGACCTCGTCACACCTACCGTCGAGCCGGAGAAGGCAAAAGGTGACGTCT
GAGAGCATCCAGAAGAGCTTTGAGGAGCTGGTAATGAAAAAATACATCGA
TAAGGTGCCCAAGCTCGACCTCGTCACACCTACCGTCGAGCCGGAGAAGG
CAAAAAAGCCGTCGATGACCTTCGGGGCACCAGCCGGCAGCGGTGGCGGC
GGCGGCGGCAATGACAGCAAGAGCAAGTCGGCGTCGGCAGCCAATGGGCA
AAACGGAAGGAACAAGGAGCTGGCTGAGCGGCAGCAGAAGGGAGCTGCGC
AGACGTCGGCAAGGAAGCGCAGGATGCTCGGGAAAGCCGTCGATGACCTT
CGGGGCACCAGCCGGCAGCGGTGGCGGCGGCGGCGGCAATGACAGCAAGA
GCAAGTCGGCGTCGGCAGCCAATGGGCAAAACGGAAGGAACAAGGAGCTG
GCTGAGCGGCAGCAGAAGGGAGCTGCGCAGACGTCGGCAAGGAAGCGCAG
GATGCTCGGGCAAGACTCCAACAGCAGCGGAGTGGACGGAGGCAACGGAG
ATGGCGGCGATTCCGACGACGACGACGAGCTCCCGGTAGAGATGCGGAAC
CTGGTGAGCAGCATGGAGGGAGGCTTCGACGGCCAAGACTCCAACAGCAG
CGGAGTGGACGGAGGCAACGGAGATGGCGGCGATTCCGACGACGACGACG
AGCTCCCGGTAGAGATGCGGAACCTGGTGAGCAGCATGGAGGGAGGCTTC
GACGGC
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