prot_E-siliculosus-1a_F_contig1089.607.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1089.607.1
Unique Name	prot_E-siliculosus-1a_F_contig1089.607.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	376

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1089.607.1 vs. uniprot
Match: A0A6H5JM01_9PHAE (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM01_9PHAE)

HSP 1 Score: 525 bits (1352), Expect = 1.040e-183
Identity = 312/340 (91.76%), Postives = 319/340 (93.82%), Query Frame = 0

Query:   37 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGPSSNVHLHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDHVQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXXXXXXANGQNGRNKELAERQQKGAAQTSARKRRMLGQDSNSSGVDGXXXXXXXXXXXXELPVEMRNLVSSMEGGFDG 376
            MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRA+RTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSG SSN+ LHYTLLPLEVLVRTRGPQFHSHAA+TFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXD+VQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPA +                ANGQNGRNKELAERQQKGAAQ SARKRRMLGQDSNS+GVDGXXXXXXXXXXXXELPVEMR+LVSSME GFDG
Sbjct:    1 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRAERTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGRSSNIRLHYTLLPLEVLVRTRGPQFHSHAAKTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDNVQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPADNDSKGKSASA-------ANGQNGRNKELAERQQKGAAQRSARKRRMLGQDSNSNGVDGXXXXXXXXXXXXELPVEMRSLVSSMEEGFDG 333

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BLAST of mRNA_E-siliculosus-1a_F_contig1089.607.1 vs. uniprot
Match: D7FMS5_ECTSI (DNA-directed RNA polymerase III subunit RPC3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS5_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 3.160e-171
Identity = 293/299 (97.99%), Postives = 294/299 (98.33%), Query Frame = 0

Query:   37 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKTRTKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGPSSNVHLHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDHVQEVTSESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXXXXXXANGQNGRNKELAERQQKGAAQTSARKRRMLG 335
            MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKT TKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSG S N+ LHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDHVQEVT ESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXXXXXXANGQNGRNKELAERQQKGAAQTSARKRRMLG
Sbjct:    1 MAFLLESQMPLVALESSRRKLVLSVIEEYHGPIVSTVAEVLMRADRTTLAELTRLVLRDQGIMGVSRAGKTITKVTAANVKESLLIMTQHNMVAAAMPTEKEMRKARASSSGRSGNIRLHYTLLPLEVLVRTRGPQFHSHAARTFSKVAGLVVDCFLRHGRRTLPDVKEELLRREGEAARARKALANPEDXXXXXXXDHVQEVTPESIQKSFEELVMKKYIDKVPKLDLVTPTVEPEKAKKPSMTFGAPAGSXXXXXXXXXXXXXXXXANGQNGRNKELAERQQKGAAQTSARKRRMLG 299

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1089.607.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1089.607.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2

ZOOM

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POSITION

0


Match Name	E-value	Identity	Description
A0A6H5JM01_9PHAE	1.040e-183	91.76	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]
D7FMS5_ECTSI	3.160e-171	97.99	DNA-directed RNA polymerase III subunit RPC3 n=1 T...	[more]