prot_E-siliculosus-1a_F_contig1085.590.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1085.590.1
Unique Name	prot_E-siliculosus-1a_F_contig1085.590.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	113

Homology

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1085.590.1 vs. uniprot
Match: D7G7T5_ECTSI (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7T5_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 2.590e-77
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0

Query:    1 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLADKMDPGTNVAPMAM 112
            MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQ+LADKMDPGTNVAPMAM
Sbjct:    1 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQELADKMDPGTNVAPMAM 112

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1085.590.1 vs. uniprot
Match: A0A7S2BBH9_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BBH9_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.660e-54
Identity = 82/108 (75.93%), Postives = 93/108 (86.11%), Query Frame = 0

Query:    3 ARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLADKMDPGTNVAPM 110
            ARIEYSEKYQDD +EYRHVILPK+LAK LPK+R+L+EQEWRG+GVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+GK+DP LE+EAK AYQ +L        N APM
Sbjct:   21 ARIEYSEKYQDDKYEYRHVILPKELAKNLPKARLLSEQEWRGIGVQQSRGWAHYAIHRPEPHILLFRRPLGTDPVTGKIDPALEREAKDAYQNNLE------LNQAPM 122

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1085.590.1 vs. uniprot
Match: A0A7S2BWV6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BWV6_9STRA)

HSP 1 Score: 169 bits (427), Expect = 3.650e-52
Identity = 78/98 (79.59%), Postives = 88/98 (89.80%), Query Frame = 0

Query:    1 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLA 98
            MA+RIEYSEKY DD+FEYRHVILPK+LAK LPK+R+L EQEWRG+GVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+GKVD  LE++AK AY   LA
Sbjct:   20 MASRIEYSEKYTDDAFEYRHVILPKELAKNLPKARLLGEQEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVDVELERDAKDAYNASLA 117

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1085.590.1 vs. uniprot
Match: W7T145_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T145_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.150e-49
Identity = 72/97 (74.23%), Postives = 86/97 (88.66%), Query Frame = 0

Query:    1 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDL 97
            MA+RIEYSEKY DD+ EYRHVILPK++A+ LPK R+LTE EWRG+GVQQSRGW HYAIHRPEPHILLF+RPLGTDPV+GKV+  LE+EAK+ Y + +
Sbjct:    1 MASRIEYSEKYMDDNHEYRHVILPKEIARSLPKQRLLTESEWRGIGVQQSRGWQHYAIHRPEPHILLFRRPLGTDPVTGKVNAELEREAKEKYAESM 97

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1085.590.1 vs. uniprot
Match: A0A7S3MEH0_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEH0_9STRA)

HSP 1 Score: 160 bits (404), Expect = 6.650e-49
Identity = 72/95 (75.79%), Postives = 84/95 (88.42%), Query Frame = 0

Query:    4 RIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLA 98
            +IEYSEKYQD  +EYRHVILPKD A+ LPK+R LTE EWR +GVQQSRGW HYA H+PEPHILLF+RPLGTDPVSG+VDP LE+EA++ YQQ+LA
Sbjct:    5 QIEYSEKYQDGKYEYRHVILPKDSARNLPKNRTLTELEWRNIGVQQSRGWEHYACHKPEPHILLFRRPLGTDPVSGEVDPELEREAREKYQQELA 99

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1085.590.1 vs. uniprot
Match: A0A6S9ANL1_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9ANL1_9STRA)

HSP 1 Score: 160 bits (404), Expect = 6.650e-49
Identity = 73/96 (76.04%), Postives = 85/96 (88.54%), Query Frame = 0

Query:    2 AARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDL 97
            A+RIEYSEKY D + EYRHVILPKDLAK LPK+R+L+E EWRG+GVQQSRGWMHYAIHRPEPHILLF+RPLGTDP SG+VDP LE+EA++ Y+   
Sbjct:    4 ASRIEYSEKYADTANEYRHVILPKDLAKTLPKNRLLSESEWRGIGVQQSRGWMHYAIHRPEPHILLFRRPLGTDPQSGQVDPELEREAREEYKNQF 99

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1085.590.1 vs. uniprot
Match: A0A7S1CQT6_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQT6_9STRA)

HSP 1 Score: 160 bits (405), Expect = 7.010e-49
Identity = 71/97 (73.20%), Postives = 83/97 (85.57%), Query Frame = 0

Query:    1 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDL 97
            +A RIEYSEKYQDD FEYRHVILPK+LAK LPK R+L E EWRG+GVQQSRGW+HYA HRPEPH+LLF+RPLGTDP +GK+D VL +EA+  Y +D 
Sbjct:    5 IAKRIEYSEKYQDDKFEYRHVILPKELAKSLPKERLLLEPEWRGIGVQQSRGWVHYACHRPEPHVLLFRRPLGTDPTTGKIDKVLAREARDQYYKDF 101

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1085.590.1 vs. uniprot
Match: A0A7S1UE56_9STRA (Cyclin-dependent kinases regulatory subunit n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE56_9STRA)

HSP 1 Score: 160 bits (404), Expect = 1.750e-48
Identity = 71/100 (71.00%), Postives = 87/100 (87.00%), Query Frame = 0

Query:    2 AARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLADKM 101
            A+RIEYSEKY D+ FEYRHVILPK+LAK +PK+R+L EQEWR LGVQQSRGW HYAIHRPEPHILLF+RPLGTDP +G+VD  L++EAK++Y + L + +
Sbjct:   35 ASRIEYSEKYNDEDFEYRHVILPKELAKSIPKTRILAEQEWRNLGVQQSRGWEHYAIHRPEPHILLFRRPLGTDPTTGRVDADLQREAKESYLRTLRENL 134

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1085.590.1 vs. uniprot
Match: A0A835YHQ2_9STRA (Cyclin-dependent kinases regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHQ2_9STRA)

HSP 1 Score: 157 bits (397), Expect = 7.520e-48
Identity = 71/97 (73.20%), Postives = 85/97 (87.63%), Query Frame = 0

Query:    1 MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDL 97
            M  RIEYS+KYQD ++EYRHVILPK+LA+GLP +R+L E+EWR LGVQQSRGW+HYAIHRPEPHILLF RPLGTDP+SG+VDP  E+EAK+ Y + L
Sbjct:    1 MGTRIEYSDKYQDSNWEYRHVILPKELARGLPNTRLLQEEEWRLLGVQQSRGWVHYAIHRPEPHILLFHRPLGTDPLSGQVDPEKEREAKEGYAEHL 97

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1085.590.1 vs. uniprot
Match: A0A6H5L2I6_9PHAE (Cyclin-dependent kinases regulatory subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2I6_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 1.040e-47
Identity = 71/96 (73.96%), Postives = 85/96 (88.54%), Query Frame = 0

Query:    4 RIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQSRGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLAD 99
            RI+YSEKY D SFEYRHVILPK+ AK LP+SR+LTE EWR LGVQQSRGW HYA+H PEPHILLF+RPLGT+PV+G+VDP LE+EAK+ Y ++L+D
Sbjct:    3 RIDYSEKYVDGSFEYRHVILPKETAKILPQSRLLTEDEWRHLGVQQSRGWQHYAVHTPEPHILLFRRPLGTNPVTGRVDPELEREAKEKYAEELSD 98

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1085.590.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1085.590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7T5_ECTSI	2.590e-77	99.11	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S2BBH9_9STRA	1.660e-54	75.93	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S2BWV6_9STRA	3.650e-52	79.59	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
W7T145_9STRA	1.150e-49	74.23	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S3MEH0_9STRA	6.650e-49	75.79	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A6S9ANL1_9STRA	6.650e-49	76.04	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A7S1CQT6_9STRA	7.010e-49	73.20	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A7S1UE56_9STRA	1.750e-48	71.00	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]
A0A835YHQ2_9STRA	7.520e-48	73.20	Cyclin-dependent kinases regulatory subunit n=1 Ta...	[more]
A0A6H5L2I6_9PHAE	1.040e-47	73.96	Cyclin-dependent kinases regulatory subunit n=2 Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000789	Cyclin-dependent kinase, regulatory subunit	PRINTS	PR00296	CYCLINKINASE	coord: 19..33 score: 65.13 coord: 56..70 score: 79.49 coord: 4..18 score: 60.0 coord: 41..55 score: 77.95
IPR000789	Cyclin-dependent kinase, regulatory subunit	SMART	SM01084	CKS_2	coord: 4..73 e-value: 9.5E-44 score: 161.3
IPR000789	Cyclin-dependent kinase, regulatory subunit	PFAM	PF01111	CKS	coord: 5..71 e-value: 4.5E-36 score: 122.9
IPR000789	Cyclin-dependent kinase, regulatory subunit	PROSITE	PS00945	CKS_2	coord: 59..69
IPR000789	Cyclin-dependent kinase, regulatory subunit	PROSITE	PS00944	CKS_1	coord: 7..25
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	GENE3D	3.30.170.10		coord: 1..96 e-value: 1.8E-37 score: 129.6
IPR036858	Cyclin-dependent kinase, regulatory subunit superfamily	SUPERFAMILY	55637	Cell cycle regulatory proteins	coord: 4..75
None	No IPR available	PANTHER	PTHR23415	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7	coord: 4..76
None	No IPR available	PANTHER	PTHR23415:SF29	CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT-RELATED	coord: 4..76

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1085	contig	E-siliculosus-1a_F_contig1085:20466..25030 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1085.590.1	mRNA_E-siliculosus-1a_F_contig1085.590.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1085 18634..25059 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1085.590.1 ID=prot_E-siliculosus-1a_F_contig1085.590.1|Name=mRNA_E-siliculosus-1a_F_contig1085.590.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=113bp
MAARIEYSEKYQDDSFEYRHVILPKDLAKGLPKSRVLTEQEWRGLGVQQS
RGWMHYAIHRPEPHILLFKRPLGTDPVSGKVDPVLEQEAKKAYQQDLADK
MDPGTNVAPMAM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036858	Cyclin-dep_kinase_reg-sub_sf
IPR000789	Cyclin-dep_kinase_reg-sub