prot_E-siliculosus-1a_F_contig1083.577.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1083.577.1
Unique Nameprot_E-siliculosus-1a_F_contig1083.577.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length254
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: D8LRC0_ECTSI (W2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRC0_ECTSI)

HSP 1 Score: 401 bits (1031), Expect = 2.180e-137
Identity = 238/254 (93.70%), Postives = 239/254 (94.09%), Query Frame = 0
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKDXXXXXXXXXXXXXXXXXXXXXXNGDDSVXXXXXXXXXXXXXXXXENTSDDGETKTTVDEFGDVVATSGSLEVEDAVAFDDSVAAIRRHLDDGTSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKSRPDDQRHIIGAFELLCQ 254
            TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK K   XXXXXXXXXXXXXXXXX     NGDDS      XXXXXXXXXXXENTSDDGETKTTV+EFGDVVATSGSLEVEDAVAFDDSVAAIRRHLDDGTSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKSRPDDQRHIIGAFELLCQ
Sbjct:   69 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSKXXXXXXXXXXXXXXXXXXXXEEVSLNGDDSAKEKKDXXXXXXXXXXXENTSDDGETKTTVNEFGDVVATSGSLEVEDAVAFDDSVAAIRRHLDDGTSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKSRPDDQRHIIGAFELLCQ 322          
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A6T5QBS0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QBS0_HETAK)

HSP 1 Score: 150 bits (380), Expect = 1.460e-39
Identity = 140/261 (53.64%), Postives = 168/261 (64.37%), Query Frame = 0
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAK---KGKDKDXXXXXXXXXXXXXXXXXXXXXXNGDDSVXXXXXXXXXXXXXXXXENTSDDGETKTTVDEFGDVV---ATSGSLEVEDAVAFDDSVAAIRRHL-DDGTSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKS-RPDDQRHIIGAFELLC 253
            T++ EE+E+A+VNGAH++  LQQ+V +Y + FVLCPNCRLPE+ YKIK+  I+HKC ACGAKEMVDM HKL TYI+   KKAK   K K   XXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXX                       A  G L VED  AFD  V ++RR L   G     + EE+R AQT ++FP H+R+HL VAA+FA    V   ++ +RAA      +  P   RH+IGAFELLC
Sbjct:   68 TKWVEEEEKALVNGAHSDNDLQQMVFRYCQAFVLCPNCRLPETDYKIKSETIWHKCMACGAKEMVDMQHKLTTYILGNVKKAKLAEKAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLGGLSVEDQSAFDTGVESVRRFLASPGWDTPLLMEELRVAQTLSSFPAHFRVHLLVAAAFAEGP-VGAAEVAARAADLRAAHNGNPILARHMIGAFELLC 327          
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A7S3DU57_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DU57_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.760e-33
Identity = 61/89 (68.54%), Postives = 74/89 (83.15%), Query Frame = 0
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKD 89
            +RY+ E +RAIVNGAHT+A LQ L++KYVE FVLCPNC LPE++YKIK+  I+HKC ACGAKEMVDMSH+LC YI+   KKAKK K K+
Sbjct:   73 SRYSAETDRAIVNGAHTDAVLQDLINKYVEKFVLCPNCGLPETEYKIKSEVIYHKCAACGAKEMVDMSHRLCNYILAEDKKAKKDKGKN 161          
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: B8BW00_THAPS (W2 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW00_THAPS)

HSP 1 Score: 132 bits (333), Expect = 8.570e-33
Identity = 130/261 (49.81%), Postives = 164/261 (62.84%), Query Frame = 0
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK-----GKDKDXXXXXXXXXXXXXXXXXXXXXXNGDDSVXXXXXXXXXXXXXXXXENTSDDGETKTTVDEFGDVVATSGSLEVEDAVAFDDSVAAIRRHLDDG--TSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRA-AMFDMLKSRPDDQRHIIGAFELLC 253
            T YN E +RA+VNGAHT+  LQQ+VHKY+ELFVLCPNCRLPE++YKIK+G I+HKC ACG K+ VDM+HKLCTYI+   KKAK+     GK   XXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXX             D + D         V+DA A   +V A+++ L D    S   I E++   Q  +      +IH+FV + F T D   +  +E  A A+  + + +   +RH+I +FE LC
Sbjct:   72 TTYNTETDRAVVNGAHTDQVLQQMVHKYIELFVLCPNCRLPETEYKIKSGMIYHKCAACGNKDAVDMTHKLCTYILAQDKKAKQDAKKSGKKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYDSYDDDDNGGTEEHVDDANAMALAVEAMKKFLADNPDASPSAIAEKVVNEQMASGLKSQDKIHIFVQSVF-TPDFYKQKQVEKHAPAIAKITQGKNVMERHLIASFEGLC 331          
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A1Z5JLW0_FISSO (Translation initiation factor 5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLW0_FISSO)

HSP 1 Score: 132 bits (332), Expect = 1.100e-32
Identity = 125/260 (48.08%), Postives = 162/260 (62.31%), Query Frame = 0
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKDXXXXXXXXXXXXXXXXXXXXXXNGDDSVXXXXXXXXXXXXXXXXENTSDDGETKTTVDEFGDVVATSGSLE----VEDAVAFDDSVAAIRRHLDDGTS--NENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDML-KSRPDDQRHIIGAFELLC 253
            +RY+ + +RAIVNGAHT+ATLQ+L+H+Y+E FVLCP CRLPE+KYKIK+  I+H C ACGAK+MVDMSHKLC YI+   KKAKK K K XXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXX   +N   D  +    DEF               V+D  AF  +V A +  + +  +  ++ + E +   Q  +A   H +I + + A+F T+D     ++E  A +   +  S    +RHII A E  C
Sbjct:   73 SRYSADTDRAIVNGAHTDATLQELMHRYIEKFVLCPTCRLPETKYKIKSDTIYHSCAACGAKDMVDMSHKLCNYILAENKKAKKDKGKXXXXXXXXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXNGDKNYIKDALSGKKDDEFXXXXXXXXXXXXTEVVDDDSAFQLAVDATKTFIKENANATDDQLIEYVTNQQMASALKSHDKIRILILAAF-TSDFYKNKEVEKYAPVIARIANSNRIMERHIISALEAFC 326          
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A7S1D9Q5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9Q5_CYCTE)

HSP 1 Score: 130 bits (327), Expect = 6.810e-32
Identity = 61/90 (67.78%), Postives = 74/90 (82.22%), Query Frame = 0
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK-GKDKD 89
            T YN + +RA+VNGAHT+ TLQ L+H+Y+E FVLCPNC LPE++YKIKN  I+HKC ACG+K+MVDMSHKLCTYI+   KKAKK  K KD
Sbjct:   73 TTYNPDTDRAVVNGAHTDDTLQDLMHRYIEKFVLCPNCSLPETEYKIKNDCIYHKCAACGSKDMVDMSHKLCTYILAQDKKAKKEAKSKD 162          
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: B7G289_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G289_PHATC)

HSP 1 Score: 130 bits (327), Expect = 7.250e-32
Identity = 61/88 (69.32%), Postives = 71/88 (80.68%), Query Frame = 0
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDK 88
            TRY+ E +RA+VNGAH +A LQ L+H+Y+E FVLCPNC LPE+ YKIKN AI+HKC ACGAKEMVDMSHKLC YI+   KKAKK   K
Sbjct:   73 TRYSAETDRAVVNGAHMDAVLQDLMHRYIERFVLCPNCNLPETDYKIKNDAIWHKCAACGAKEMVDMSHKLCNYILAEDKKAKKDSKK 160          
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A7S2KDW7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KDW7_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.000e-31
Identity = 123/256 (48.05%), Postives = 155/256 (60.55%), Query Frame = 0
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKDXXXXXXXXXXXXXXXXXXXXXXNGDDSVXXXXXXXXXXXXXXXXENTSDDGETKTTVDEFGDVVATSGSLE-VEDAVAFDDSVAAIRRHLDDG--TSNENIFEEIRTAQTFAAFPVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKSRPDDQRHIIGAFELLC 253
            T Y++E  RA+VNG HT+A LQQ VHKYVE FV+CPNC LPE+ YKIK+G I HKC ACGAKEMVDMSHKL  YI+   KKAK+     XXXXXXXXXXXXX      XXX      XXXXXXXXXXXXXXXX     DGE +  V   GD+      +E V+D  A   +V A ++ L D    +   I +++   Q  +      RIH+FV A+F T    TK   ++  ++  + + +   +RH+I A E LC
Sbjct:   71 TTYSDETNRAVVNGHHTDAVLQQAVHKYVEAFVICPNCGLPETDYKIKSGVITHKCAACGAKEMVDMSHKLTNYILAQDKKAKQDAXXXXXXXXXXXXXXXXGDSDEEXXXX---XXXXXXXXXXXXXXXXXXXXXXXDGELEDAV---GDISLGDDDVEHVDDDNAMALAVEATKKFLSDNPDATPAAISDKVANEQMASGLKSQDRIHIFVRAAFTTDFFKTKQVAKNAPSISKITQGKTVMERHLISACECLC 320          
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A7S3LEE8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEE8_9STRA)

HSP 1 Score: 129 bits (324), Expect = 1.870e-31
Identity = 60/89 (67.42%), Postives = 75/89 (84.27%), Query Frame = 0
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK-GKDK 88
            TRY+ E +RAI+NGAHT+ATLQ+L+ +Y++ FVLCPNC LPE++YKIK+  +FHKC ACGAKEMVDMSHKLC +I+   KKAKK GK K
Sbjct:   73 TRYSAETDRAIINGAHTDATLQELIKRYIDKFVLCPNCNLPETEYKIKSDTVFHKCMACGAKEMVDMSHKLCNFILAENKKAKKDGKGK 161          
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Match: A0A1E7FBJ2_9STRA (eIF-5_eIF-2B-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBJ2_9STRA)

HSP 1 Score: 127 bits (320), Expect = 7.920e-31
Identity = 61/89 (68.54%), Postives = 73/89 (82.02%), Query Frame = 0
Query:    1 TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKD 89
            T YNEE +RAIVNG+HT+ TLQ+L+H+YVE FVLCP C LPE+KY IKNG I+HKC ACGAKEMVDM+HKL  YI+   KK KK K+K+
Sbjct:   73 TTYNEETDRAIVNGSHTDDTLQKLMHRYVETFVLCPTCGLPETKYSIKNGTIWHKCAACGAKEMVDMNHKLTNYILAQDKKNKKLKNKN 161          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1083.577.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRC0_ECTSI2.180e-13793.70W2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A6T5QBS0_HETAK1.460e-3953.64Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3DU57_9STRA1.760e-3368.54Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
B8BW00_THAPS8.570e-3349.81W2 domain-containing protein n=1 Tax=Thalassiosira... [more]
A0A1Z5JLW0_FISSO1.100e-3248.08Translation initiation factor 5 n=2 Tax=Fistulifer... [more]
A0A7S1D9Q5_CYCTE6.810e-3267.78Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B7G289_PHATC7.250e-3269.32Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2KDW7_9STRA1.000e-3148.05Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3LEE8_9STRA1.870e-3167.42Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1E7FBJ2_9STRA7.920e-3168.54eIF-5_eIF-2B-domain-containing protein n=1 Tax=Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..112
NoneNo IPR availableGENE3D2.20.25.350coord: 35..78
e-value: 9.4E-15
score: 56.0
NoneNo IPR availablePANTHERPTHR23001:SF7EUKARYOTIC TRANSLATION INITIATION FACTOR 5coord: 1..254
NoneNo IPR availablePANTHERPTHR23001EUKARYOTIC TRANSLATION INITIATION FACTORcoord: 1..254
IPR002735Translation initiation factor IF2/IF5SMARTSM00653eIF2Bneu4coord: 1..62
e-value: 0.0042
score: -6.4
IPR002735Translation initiation factor IF2/IF5PFAMPF01873eIF-5_eIF-2Bcoord: 4..62
e-value: 1.3E-14
score: 54.1
IPR016190Translation initiation factor IF2/IF5, zinc-bindingSUPERFAMILY75689Zinc-binding domain of translation initiation factor 2 betacoord: 32..66

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1083contigE-siliculosus-1a_F_contig1083:210..3353 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1083.577.1mRNA_E-siliculosus-1a_F_contig1083.577.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1083 210..3353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1083.577.1 ID=prot_E-siliculosus-1a_F_contig1083.577.1|Name=mRNA_E-siliculosus-1a_F_contig1083.577.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=254bp
TRYNEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNG
AIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKGKDKDAAKDSKERKRE
KKEKKKEEVSQNGDDSVKEKKEKKKKDKKKRDKENTSDDGETKTTVDEFG
DVVATSGSLEVEDAVAFDDSVAAIRRHLDDGTSNENIFEEIRTAQTFAAF
PVHYRIHLFVAASFATADKVTKDDIESRAAMFDMLKSRPDDQRHIIGAFE
LLCQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016190Transl_init_fac_IF2/IF5_Zn-bd
IPR002735Transl_init_fac_IF2/IF5