prot_E-siliculosus-1a_F_contig1082.572.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1082.572.1
Unique Nameprot_E-siliculosus-1a_F_contig1082.572.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length552
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1082.572.1 vs. uniprot
Match: D8LRX6_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRX6_ECTSI)

HSP 1 Score: 589 bits (1519), Expect = 1.710e-204
Identity = 500/551 (90.74%), Postives = 503/551 (91.29%), Query Frame = 0 
Query:    1 MAAAGLQFVDLHSAAKQDDIMGVVKLLEEGAPIDKRDPYGYTPLHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHAATDLRGRTSAAVCDMGLYDVDQSVKDRIIQLLKNPPVQQLEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANPGLQGAAPAGSSEGGSAVXXXXXXXXXXXXXXXXXXXLAAENGVFALWDTSLGPGAGDAGPGASSMIDKDWTDPEDAAWNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAASTXXXXXXXXXXXXXXXXXXXXXXTTNLEGLLGVSSAPAAASSSPGGGATSPATAVTDAPVVAPKSVTGSSEDSTTGLFGEMSVSARDASADGTAVPEGASPNSVGGGGRRTDGGMVSVPPAKRHRSTAAAEVGGSVGDSAGAEGAGSMGETELREQLTRQNRLLAEMAKELEGLRRERSGGATGNRGGSVGGMGEGSAVLPVLDDRGLAHKVR 551
            MAAAGLQFVDLHSAAKQDDIM VVKLLEEGAPIDKRDPYGYTPL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD AATDLRGRTSAAVCDMGLYDVDQSVKDRIIQLLKNPPV+QLEAP             XXXXXXXXXXXXXXXXXXX GANPGLQGA            XXXXXXXXXXXXXXXXXX LA ENGVFALWDTSLGPGAGDAGPG   MIDKDWTDPEDAAWNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAAS XXXXXXXXXXXXXXXXXXXXXXT NLEGL G+SSAPA ASSSP GGATSPATAVTDAPVVAPKSVTGSSEDSTTGLFG+MSVSARDASADGTA  EGASPNSVGGGGRRTDGGMVSVPPAKR RSTAAAEVGG VGDSAGAEGAGSMGETELREQLTRQNRLLAEMAKELEGLRRE SGGA GNR GS G MGEGSAVLPVLDDRGLAHKVR
Sbjct:    1 MAAAGLQFVDLHSAAKQDDIMAVVKLLEEGAPIDKRDPYGYTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAATDLRGRTSAAVCDMGLYDVDQSVKDRIIQLLKNPPVRQLEAPPTASPASAMLALPXXXXXXXXXXXXXXXXXXX-GANPGLQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAVENGVFALWDTSLGPGAGDAGPGG--MIDKDWTDPEDAAWNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAASXXXXXXXXXXXXXXXXXXXXXXXTANLEGLFGISSAPAEASSSPSGGATSPATAVTDAPVVAPKSVTGSSEDSTTGLFGDMSVSARDASADGTAAQEGASPNSVGGGGRRTDGGMVSVPPAKRPRSTAAAEVGGIVGDSAGAEGAGSMGETELREQLTRQNRLLAEMAKELEGLRREMSGGAAGNRSGSGGDMGEGSAVLPVLDDRGLAHKVR 548
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1082.572.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRX6_ECTSI1.710e-20490.74Chain A, Crystal Structure Of A Designed Full Cons... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 488..515
NoneNo IPR availableCOILSCoilCoilcoord: 314..334
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 10..147
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 10..147
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 40..55
score: 40.56
coord: 88..102
score: 39.12
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 72..101
e-value: 2.5E-5
score: 33.7
coord: 105..134
e-value: 2.5E-4
score: 30.4
coord: 39..68
e-value: 1.5E-7
score: 41.1
coord: 6..35
e-value: 820.0
score: 5.6
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 106..136
e-value: 9.8E-5
score: 22.6
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 72..104
score: 13.063
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 105..137
score: 11.808
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 39..71
score: 14.719
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 11..102
e-value: 5.7E-18
score: 65.3
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 11..141
score: 43.184
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 7..172
e-value: 1.8E-46
score: 159.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 11..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1082contigE-siliculosus-1a_F_contig1082:11896..18060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1082.572.1mRNA_E-siliculosus-1a_F_contig1082.572.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1082 11457..18180 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1082.572.1 ID=prot_E-siliculosus-1a_F_contig1082.572.1|Name=mRNA_E-siliculosus-1a_F_contig1082.572.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=552bp
MAAAGLQFVDLHSAAKQDDIMGVVKLLEEGAPIDKRDPYGYTPLHWACQK
GHTHTVQALLAAGANVHVRDKWRRTPLHRAAKEGHKDVVAALLNSGAEIN
AQGDNNWTPLHCSSFHGKLEIVEMLLRNGADHAATDLRGRTSAAVCDMGL
YDVDQSVKDRIIQLLKNPPVQQLEAPPAAAPATTMLALPPSSTAATPAAA
AAAAAAAAAGANPGLQGAAPAGSSEGGSAVASAASASAAAAAASAASAAL
AAENGVFALWDTSLGPGAGDAGPGASSMIDKDWTDPEDAAWNEMWAMLHV
PDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAASTATATGGAKDST
TKGVTRGITKGTTNLEGLLGVSSAPAAASSSPGGGATSPATAVTDAPVVA
PKSVTGSSEDSTTGLFGEMSVSARDASADGTAVPEGASPNSVGGGGRRTD
GGMVSVPPAKRHRSTAAAEVGGSVGDSAGAEGAGSMGETELREQLTRQNR
LLAEMAKELEGLRRERSGGATGNRGGSVGGMGEGSAVLPVLDDRGLAHKV
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt