prot_E-siliculosus-1a_F_contig1078.546.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1078.546.1
Unique Nameprot_E-siliculosus-1a_F_contig1078.546.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length341
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1078.546.1 vs. uniprot
Match: D8LSM3_ECTSI (Co-chaperone grpE family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM3_ECTSI)

HSP 1 Score: 474 bits (1220), Expect = 9.030e-166
Identity = 323/343 (94.17%), Postives = 327/343 (95.34%), Query Frame = 0
Query:    1 MRSATTSTLSRGAQRTRGTPLLSPGALRTSGYRERGLRLIMAAEPAEDSVAEAXXXXXXXXXXXXXSISEGEEAVEDEASGGGDGETEVVAEEGEGKEGEXXXXXXXXXXVDPMAEVKQQIKDLEKELMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKASEEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEKKXXXXXXXXXXXXXXXXXXXXXXXXXXEAEEPPMRDAGVDA---EGEQPEGEQAAA 340
            MRSATTSTL RGAQRTRGTPLLSPGALRTSGYRERG+ L+MAAEP+EDSVAEAXXXXXXXXXXX  SISEGEEAVEDEASGGGD ETEVVAEEGEGKEGEXXXXXXXXX VDPMAEVKQQIKDLEKELMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNL TETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKASEEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEK+  XXXXXXXXXXXXXXXXXXXXXXXX    PPMRDAGVDA   EGEQPEGEQAAA
Sbjct:    1 MRSATTSTLFRGAQRTRGTPLLSPGALRTSGYRERGVHLMMAAEPSEDSVAEAXXXXXXXXXXX--SISEGEEAVEDEASGGGDVETEVVAEEGEGKEGEXXXXXXXXX-VDPMAEVKQQIKDLEKELMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLATETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKASEEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEKEEPXXXXXXXXXXXXXXXXXXXXXXXXP---PPMRDAGVDAAAPEGEQPEGEQAAA 337          
BLAST of mRNA_E-siliculosus-1a_F_contig1078.546.1 vs. uniprot
Match: A0A6H5KMN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN5_9PHAE)

HSP 1 Score: 329 bits (843), Expect = 2.270e-110
Identity = 206/215 (95.81%), Postives = 209/215 (97.21%), Query Frame = 0
Query:  129 MKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKASEEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEKKXXXXXXXXXXXXXXXXXXXXXXXXXXEAEEPPMRDAGVDA---EGEQPEGEQAAA 340
            MKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFTK+GATDFFGVVGEKFVYTRHEKASEE+NPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEKK XXXXXXXXXXXXXXXXXXXXXXX  EAEEPPMRDAGVDA   EGE+PEGEQAAA
Sbjct:    1 MKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFTKVGATDFFGVVGEKFVYTRHEKASEEYNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEKKEXXXXXXXXXXXXXXXXXXXXXXX--EAEEPPMRDAGVDAASPEGEEPEGEQAAA 213          
BLAST of mRNA_E-siliculosus-1a_F_contig1078.546.1 vs. uniprot
Match: A0A6H5KJC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC6_9PHAE)

HSP 1 Score: 130 bits (326), Expect = 6.240e-33
Identity = 109/124 (87.90%), Postives = 112/124 (90.32%), Query Frame = 0
Query:    2 RSATTSTLSRGAQRTRGTPLLSPGALRTSGYRERGLRLIMAAEPAEDSVAEAXXXXXXXXXXXXX--SISEGEEAVE-DEASGGGDGETEVVAEEGEGKEGEXXXXXXXXXXVDPMAEVKQQIK 122
            RSATTSTL RGAQRTRGTPLLSPGALRTSGYRERG+ L+MAAEP EDSVAEAXXXXXXXXXXXXX  SISEGEEAVE DEASGGG GETEVVAEEG+G    XXXXXXXXX VDPMAEVKQQIK
Sbjct:   52 RSATTSTLYRGAQRTRGTPLLSPGALRTSGYRERGVHLMMAAEPTEDSVAEAXXXXXXXXXXXXXXPSISEGEEAVEYDEASGGGYGETEVVAEEGDGTXX-XXXXXXXXXEVDPMAEVKQQIK 174          
BLAST of mRNA_E-siliculosus-1a_F_contig1078.546.1 vs. uniprot
Match: A0A835ZD01_9STRA (GrpE-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD01_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.690e-26
Identity = 66/132 (50.00%), Postives = 83/132 (62.88%), Query Frame = 0
Query:  159 NFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAA---EEALNLETETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKASEEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEK 287
            N+RK         +A+A A VLR+  P  E FEA    E  L LETE E  +N +YQALYRQL DV+TK+G TDFFGV GE +   RHEK  E+H  + + G +++C++ G EL   VIRKA  V SLGPEK
Sbjct:   93 NYRKRRNLDQKKLQAEAMARVLRSFEPVLEAFEAVVDGETDLKLETEQEQMFNSNYQALYRQLADVYTKLGVTDFFGVQGETYDGIRHEKVGEQHADI-RAGAVLECLAKGNELSGGVIRKAKVVTSLGPEK 223          
BLAST of mRNA_E-siliculosus-1a_F_contig1078.546.1 vs. uniprot
Match: A0A7S3XS89_HETAK (Hypothetical protein n=4 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS89_HETAK)

HSP 1 Score: 85.1 bits (209), Expect = 5.170e-15
Identity = 57/164 (34.76%), Postives = 87/164 (53.05%), Query Frame = 0
Query:  123 DLEKELMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALN--LETETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKASEEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLG 284
            DLEK+L   E + ++  D+V E G+ G++R AA VDN++++        +  + A  L   +P  + FE    A +     E E K   SY ALY QL   F K+G   +   VGE +   RHEK  E  +   K+G +++ ++PG+EL  ++IR A  VVS G
Sbjct:  103 DLEKQLSALEVKAKEAADNVLESGKTGYMRAAADVDNYKRALAKDLDQVKKTSMAGALTGFMPILDRFEEVYGAFDPAATPEGEAKLYGSYHALYGQLTLGFEKLGMAQYRAEVGEAYSVLRHEKTQEVESEA-KKGTVVEALAPGMELGGSIIRPARVVVSAG 265          
BLAST of mRNA_E-siliculosus-1a_F_contig1078.546.1 vs. uniprot
Match: A0A7S4D635_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D635_HETAK)

HSP 1 Score: 84.7 bits (208), Expect = 1.490e-14
Identity = 57/164 (34.76%), Postives = 86/164 (52.44%), Query Frame = 0
Query:  123 DLEKELMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALN--LETETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKASEEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLG 284
            DLEK+L   E + ++  D+V E G+ G++R AA VDN++++        +  + A  L   +P  + FE    A +     E E K   SY ALY QL   F K+G   +   VGE +   RHEK  E  +   K+G +++ ++PG+EL   +IR A  VVS G
Sbjct:  201 DLEKQLSALEVKAKEAADNVLESGKTGYMRAAADVDNYKRALAKDLDQVKKTSMAGALTGFMPILDRFEEVYGAFDPAATPEGEAKLYGSYHALYGQLTLGFEKLGMAQYRAEVGEAYSVLRHEKTQEVESEA-KKGTVVEALAPGMELGGTIIRPARVVVSAG 363          
BLAST of mRNA_E-siliculosus-1a_F_contig1078.546.1 vs. uniprot
Match: A0A7S2LF94_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LF94_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 1.240e-12
Identity = 57/174 (32.76%), Postives = 94/174 (54.02%), Query Frame = 0
Query:  114 MAEVKQQIKDLEKELMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFT-KIGATDFFGVVGEKFVYTRHEKASEEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPE 286
            M  +K++I  LE  L  +   L  V D  +   + G++R  A++DN+RK S   + +    ++AAV+R  LP  E  E       LE + E     +Y+AL   L++V   K+  +++   VG++F Y R+   +EE +  + +G II+ +SPGLE+K NV+R A  + S G E
Sbjct:  108 MVALKEEISKLEATLRSKRAALSGVLDEAELYTETGYMRTLAEMDNYRKRSEISSQNNRYSSRAAVVRQFLPILEELEM------LERQYE---GSAYKALRWDLQNVLQEKLDMSEYHAEVGDEFSYIRYNAVAEEFSEEVAKGCIIRQISPGLEIKGNVLRAADVIKSKGSE 272          
BLAST of mRNA_E-siliculosus-1a_F_contig1078.546.1 vs. uniprot
Match: A0A7S2V060_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V060_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.770e-11
Identity = 65/220 (29.55%), Postives = 111/220 (50.45%), Query Frame = 0
Query:   72 EEAVEDEASGGGDGETEVVAEEGEGKEGEXXXXXXXXXXVDPMAEVKQQIKDLEKELMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEA----AEEALNLETETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKAS--EEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGP 285
            E AVE++    GD   EV A+  E ++ E           DP+AE+KQQI+                +  + + G+ G++ +AA+ DN+++SS +        A A V+   +P  + FEA    AE   NL +E  +K +++YQAL RQ+  +F  +GA+ F   VG +    ++  +S  E  N   K+G++++ +  G E+   +IR A CV+ + P
Sbjct:   67 EPAVENKVPEDGDEAAEVEAKPEEPEDAEE---------ADPLAELKQQIEXXXXXXXXXXXXXXISKRKILDNGKTGYVTIAAEADNYKRSSKSTIDSLGTRAMAEVISDFMPLVDKFEAIKETAEATENL-SEDVLKIHRNYQALPRQMMTIFEGLGASSFDATVGSQIDPIKNVASSTREPANDKEKDGMVVEALKSGFEINGVIIRPASCVMCVVP 276          
BLAST of mRNA_E-siliculosus-1a_F_contig1078.546.1 vs. uniprot
Match: A0A7S1T8I4_9CHLO (GrpE protein homolog n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T8I4_9CHLO)

HSP 1 Score: 72.8 bits (177), Expect = 8.890e-11
Identity = 51/157 (32.48%), Postives = 80/157 (50.96%), Query Frame = 0
Query:  127 ELMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKASEEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSL 283
            E + E N    +Q+S+    +  +LR  A  +NFRK S           K  V+   LP  + FE A + L LETE E K + SYQA+YRQ+ ++F  +G T     VG+ F   +HE   +E +  +++GLI+     G  L   ++R A+  V++
Sbjct:  139 ESVNEVNAAVKLQESIALAAKEQYLRSTADFENFRKRSQIEKDALRDSVKGDVVSDFLPLVDNFELASKQLKLETEAEKKIDASYQAMYRQMVEIFKNLGVTAV-ETVGKPFDPEKHEAIMQEESTEVEDGLILDEFRRGFMLGSKLLRPAMVKVAI 294          
BLAST of mRNA_E-siliculosus-1a_F_contig1078.546.1 vs. uniprot
Match: A0A835RLD5_VANPL (GrpE protein homolog n=1 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RLD5_VANPL)

HSP 1 Score: 72.4 bits (176), Expect = 3.130e-10
Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = 0
Query:  150 FLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKASEEHNPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEKK 288
            FLR+ A + NFRKS+      + AD +A V+  +LP  + FE A+  +  ETE E K + SYQ +Y+Q  ++   +  +     VG  F  + HE  + E +   K G++++ +  G  L   V+R A+  VS GP  +
Sbjct:  675 FLRINADLKNFRKSAEKDRLSFTADIRAEVVEHLLPLIDNFERAKHQMKPETEREKKIDSSYQGIYKQFVEIMRSMRVS-VVETVGRPFDPSIHEAIAREESNQFKSGIVMQELRRGFYLCDQVLRPAIVKVSTGPRSE 812          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1078.546.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
D8LSM3_ECTSI9.030e-16694.17Co-chaperone grpE family protein n=1 Tax=Ectocarpu... [more]
A0A6H5KMN5_9PHAE2.270e-11095.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJC6_9PHAE6.240e-3387.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZD01_9STRA2.690e-2650.00GrpE-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S3XS89_HETAK5.170e-1534.76Hypothetical protein n=4 Tax=Heterosigma akashiwo ... [more]
A0A7S4D635_HETAK1.490e-1434.76Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2LF94_9STRA1.240e-1232.76Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2V060_9STRA1.770e-1129.55Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1T8I4_9CHLO8.890e-1132.48GrpE protein homolog n=2 Tax=Tetraselmis chuii Tax... [more]
A0A835RLD5_VANPL3.130e-1032.37GrpE protein homolog n=1 Tax=Vanilla planifolia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..141
NoneNo IPR availablePANTHERPTHR21237:SF4GRPE PROTEIN HOMOLOGcoord: 112..295
IPR013805GrpE nucleotide exchange factor, coiled-coilGENE3D3.90.20.20coord: 91..225
e-value: 3.7E-7
score: 31.7
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 125..226
IPR000740GrpE nucleotide exchange factorPFAMPF01025GrpEcoord: 104..282
e-value: 1.7E-18
score: 66.8
IPR000740GrpE nucleotide exchange factorPANTHERPTHR21237GRPE PROTEINcoord: 112..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1078contigE-siliculosus-1a_F_contig1078:25522..29584 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1078.546.1mRNA_E-siliculosus-1a_F_contig1078.546.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1078 25374..29584 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1078.546.1 ID=prot_E-siliculosus-1a_F_contig1078.546.1|Name=mRNA_E-siliculosus-1a_F_contig1078.546.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=341bp
MRSATTSTLSRGAQRTRGTPLLSPGALRTSGYRERGLRLIMAAEPAEDSV
AEAAAAAAAAAAAEEPSISEGEEAVEDEASGGGDGETEVVAEEGEGKEGE
KKDEEEKEEEVDPMAEVKQQIKDLEKELMKEENRLRDVQDSVQEKGQMGF
LRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLE
TETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKASEEH
NPVMKEGLIIKCVSPGLELKKNVIRKAVCVVSLGPEKKEEPKEEEEEAAA
PAAAAAAAEGEAAAEAEEPPMRDAGVDAEGEQPEGEQAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000740GrpE
IPR013805GrpE_coiled_coil