prot_E-siliculosus-1a_F_contig10775.542.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10775.542.1
Unique Nameprot_E-siliculosus-1a_F_contig10775.542.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length88
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10775.542.1 vs. uniprot
Match: D8LGJ8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ8_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 2.610e-15
Identity = 43/74 (58.11%), Postives = 47/74 (63.51%), Query Frame = 0 
Query:   15 MKGGAAQ-SSQISANALPDVGGGSRGICRCSRRAYQGGEQQQGFFAGGWEEPEFTWQWREDPTLLRPTKSGWYL 87
            MKGGAAQ SSQISANALPDVGG +           +     + F AGGWEEPE  WQWREDP   R  +SGWYL
Sbjct:    1 MKGGAAQQSSQISANALPDVGGAAWAFVVVVGALTRVVSSSRFFLAGGWEEPESAWQWREDPRQDR--QSGWYL 72
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BLAST of mRNA_E-siliculosus-1a_F_contig10775.542.1 vs. uniprot
Match: D8LR06_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR06_ECTSI)

HSP 1 Score: 48.5 bits (114), Expect = 2.100e-5
Identity = 22/24 (91.67%), Postives = 22/24 (91.67%), Query Frame = 0 
Query:   35 GGSRGICRCSRRAYQGGEQQQGFF 58
            GGS GICRCSRRAYQGGEQ QGFF
Sbjct:   37 GGSVGICRCSRRAYQGGEQPQGFF 60
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10775.542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGJ8_ECTSI2.610e-1558.11Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LR06_ECTSI2.100e-591.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10775contigE-siliculosus-1a_F_contig10775:1924..2187 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10775.542.1mRNA_E-siliculosus-1a_F_contig10775.542.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10775 1924..2187 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10775.542.1 ID=prot_E-siliculosus-1a_F_contig10775.542.1|Name=mRNA_E-siliculosus-1a_F_contig10775.542.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=88bp
RGGSAGLFGWAVLQMKGGAAQSSQISANALPDVGGGSRGICRCSRRAYQG
GEQQQGFFAGGWEEPEFTWQWREDPTLLRPTKSGWYL*
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