prot_E-siliculosus-1a_F_contig1076.534.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1076.534.1
Unique Nameprot_E-siliculosus-1a_F_contig1076.534.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length248
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1076.534.1 vs. uniprot
Match: D7G7U8_ECTSI (Thylakoid lumenal 15 kDa protein, chloroplast (P15) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7U8_ECTSI)

HSP 1 Score: 384 bits (986), Expect = 3.680e-133
Identity = 239/247 (96.76%), Postives = 240/247 (97.17%), Query Frame = 0
Query:    1 MATMIMKGLVVSAGVAGVAGFVPPSAGRSTAWRGHQVKMNLFNDAARCVPAVLLGVALTTSAPLLDSPATHTHTAVLGASPVFADDKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVDTRDSLGCP 247
            MATMIMKGLVVSAGVAGVAGFVPPSAGR TAWRG QV MNLFNDAARCVPAVLLGV LTTSAPLLDSPA HT  AVLGASPVFADDKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGL+TAKGTNPVSGVDTRDSLGCP
Sbjct:    1 MATMIMKGLVVSAGVAGVAGFVPPSAGRCTAWRGRQVTMNLFNDAARCVPAVLLGVTLTTSAPLLDSPAAHT--AVLGASPVFADDKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLETAKGTNPVSGVDTRDSLGCP 245          
BLAST of mRNA_E-siliculosus-1a_F_contig1076.534.1 vs. uniprot
Match: A0A835YUD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUD1_9STRA)

HSP 1 Score: 169 bits (429), Expect = 7.790e-49
Identity = 116/160 (72.50%), Postives = 131/160 (81.88%), Query Frame = 0
Query:   87 KGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVDTRDSLGC 246
            +G SSVSD+K+  GAAST D G+RK +TRGVN+ENAD+H KD+S VSFQQSLVRGTNF ++KL+ +GFFDA     XXXXXXXXXXXXXXXXXXXXXXXXX     YVSGATK EP  IEGADFTDTFLRKDQ+ YLC +  AKGTNPV+GVDT DSL C
Sbjct:   75 EGASSVSDTKMLSGAASTLDTGSRKIITRGVNLENADFHGKDMSGVSFQQSLVRGTNFASSKLIGSGFFDADLSNCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVSGATKFEPKDIEGADFTDTFLRKDQIMYLCAI--AKGTNPVTGVDTADSLSC 232          
BLAST of mRNA_E-siliculosus-1a_F_contig1076.534.1 vs. uniprot
Match: A0A7S2CVZ3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CVZ3_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.860e-34
Identity = 107/175 (61.14%), Postives = 128/175 (73.14%), Query Frame = 0
Query:   76 VLGASPVFAD-DKGMSSVSDSKLSVGAAST--GDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVDTRDSLGCP 247
            +L A+P FA+ D G S+V ++K+  G AST    +GARKT+TRGV ++ A++  +DL+ VSFQQS +RG  F+  KL+ A FFDA   XXXXXXXXXXXXXXXXXXXXXXXXXXX        GAT  + A IEGADFTDTFLRKDQ + LC   TAKGTNP +GVDTRDSL CP
Sbjct:   36 LLSATPAFAESDGGASNVENTKIMNGGASTIVNQRGARKTITRGVQLDKANFAGEDLTGVSFQQSQIRGGVFEKTKLLGASFFDATLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGATSFKDAKIEGADFTDTFLRKDQQKELCA--TAKGTNPTTGVDTRDSLMCP 208          
BLAST of mRNA_E-siliculosus-1a_F_contig1076.534.1 vs. uniprot
Match: A0A448ZI41_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI41_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.990e-29
Identity = 81/167 (48.50%), Postives = 108/167 (64.67%), Query Frame = 0
Query:   81 PVFADDKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPA-IIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVDTRDSLGC 246
            P FAD +G ++ S++K++ G AST   G    +TRGVN++N+++  ++L  V+FQQS+VR +NFK A  V       XXXXXXXXXXXX                  ++ E YVSGAT  E    IEG+D+++TFLRKDQ +YLC   TAKGTNPV+GVDTR+SL C
Sbjct:   68 PAFAD-QGATAASNAKITTGGASTLQSGRTIAITRGVNLDNSNFXGQNLKGVAFQQSIVRDSNFKGANXVXXXXXXXXXXXXXXXXXXXTLSNVEMAQFNRANLKNTVMKEVYVSGATLFEGVKSIEGSDWSETFLRKDQQKYLCEHPTAKGTNPVTGVDTRESLMC 233          
BLAST of mRNA_E-siliculosus-1a_F_contig1076.534.1 vs. uniprot
Match: W7U2G1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U2G1_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.710e-28
Identity = 95/154 (61.69%), Postives = 116/154 (75.32%), Query Frame = 0
Query:   94 DSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVDTRDSLGCP 247
            D K+  G+AST + G  KT+TRGVNIENA++  KDL++VSFQQSLVR  NF+ AK ++A FFDA   XXXXXXXXXXXXXXXXXXXXXXXXXXX     YVSGAT++    IEG+D++ TFLRKDQ  YLC    A G NP++ + T++SL CP
Sbjct:  171 DFKIKKGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLC--KRASGVNPITKISTKESLLCP 322          
BLAST of mRNA_E-siliculosus-1a_F_contig1076.534.1 vs. uniprot
Match: A0A7S0TH33_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TH33_HEMAN)

HSP 1 Score: 112 bits (280), Expect = 1.910e-26
Identity = 95/151 (62.91%), Postives = 111/151 (73.51%), Query Frame = 0
Query:   96 KLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVDTRDSLGC 246
            K+  GAAST D G+R+T+TRG  ++N+ +  + L  +SFQQSL R  +FK A L  A     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+V EAY+   TK++   IEGADFTDTFLRKDQ RYLC    A GTNP +GVDT DSL C
Sbjct:   89 KVLQGAASTQDSGSRRTITRGATLDNSRFDGQKLDGISFQQSLCRDCDFKGASLKGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVNEAYILATTKLDGINIEGADFTDTFLRKDQQRYLCSR--ASGTNPKTGVDTYDSLLC 237          
BLAST of mRNA_E-siliculosus-1a_F_contig1076.534.1 vs. uniprot
Match: A0A4D9CRG8_9STRA (Rhomboid domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRG8_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.440e-26
Identity = 112/231 (48.48%), Postives = 140/231 (60.61%), Query Frame = 0
Query:   22 VPPSAGRSTAWRGHQVKMN------LFNDAARCVPAVL--LGVALTTSAPLLDSPATHTHTAVLGASPVFADDKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVDTRDSL 244
            +P  +GR     G Q ++       L   A   VP+ +  LGV     AP L +P    H                 + +D K+  G+AST + G  KT+TRGVNIENA++  KDL++VSFQQSLVR  NF+ AK ++A FFDA   XXXXXXXXXXXXXXXXXXXXXXXXXXX     YVSGAT++    IEG+D++ TFLRKDQ  YLC    A G NPV+ V T++SL
Sbjct:    5 LPSRSGRGGKGEGGQTQLGASPTFYLARFAMALVPSSVTALGVGFGVLAPALVAPVPAVH---------------AQTDTDFKIKRGSASTLNSGTVKTMTRGVNIENANFEGKDLTTVSFQQSLVRDGNFRGAKCLSASFFDADLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYVSGATRLTDIQIEGSDWSGTFLRKDQQTYLC--KRASGVNPVTKVSTKESL 218          
BLAST of mRNA_E-siliculosus-1a_F_contig1076.534.1 vs. uniprot
Match: A0A1E7FD64_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD64_9STRA)

HSP 1 Score: 109 bits (272), Expect = 6.230e-26
Identity = 84/168 (50.00%), Postives = 117/168 (69.64%), Query Frame = 0
Query:   81 PVFA-DDKGMSSVSDSKLSVGAASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAI-IEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVDTRDSLGC 246
            P FA +  G ++ +++K++ G AST   G    +TRGVN++ +D+ +++L  V+FQQS+VR +NFK   L  + FF  XXXXXXXXXXXXXXXXXXXXXX        ++ E YVSG+T  E    IEG+D+++T+LR DQ + LC   T+KGTNPV+GV+TR+SL C
Sbjct:   18 PAFAVEGGGATTAANAKITTGGASTLQSGRTIAITRGVNLDRSDFSNQNLKGVAFQQSIVRDSNFKGCNLYGSSFFXXXXXXXXXXXXXXXXXXXXXXXXNRANLHNTIMREVYVSGSTLFEGIKDIEGSDWSETYLRADQKKLLCEHPTSKGTNPVTGVNTRESLMC 185          
BLAST of mRNA_E-siliculosus-1a_F_contig1076.534.1 vs. uniprot
Match: A0A7S3Y7I5_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Y7I5_9EUKA)

HSP 1 Score: 110 bits (276), Expect = 6.890e-26
Identity = 97/158 (61.39%), Postives = 118/158 (74.68%), Query Frame = 0
Query:   93 SDSKLSVGAAST-GDKGARKT---VTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVDTRDSLGC 246
            SDSK++ GAAST GDKG        TRGV ++ +D+  KDLS VSFQQS+VR TNF          FD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++ EAY+SG+T +    I+ +D+TDTF+RKDQ++YLC +  A GTNP +GV TR+SLGC
Sbjct:   91 SDSKIAKGAASTSGDKGIAAQSGIATRGVILDYSDFSGKDLSGVSFQQSIVRKTNFXXXXXXXXXXFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINEAYISGSTVLRDINIKDSDWTDTFVRKDQLQYLCQI--ASGTNPTTGVGTRESLGC 246          
BLAST of mRNA_E-siliculosus-1a_F_contig1076.534.1 vs. uniprot
Match: A0A7S2TUI3_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TUI3_9EUKA)

HSP 1 Score: 110 bits (276), Expect = 7.210e-26
Identity = 97/158 (61.39%), Postives = 118/158 (74.68%), Query Frame = 0
Query:   93 SDSKLSVGAAST-GDKGARKT---VTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLVAAGFFDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVTEAYVSGATKMEPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVDTRDSLGC 246
            SDSK++ GAAST GDKG        TRGV ++ +D+  KDLS VSFQQS+VR TNF          FD XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX++ EAY+SG+T +    I+ +D+TDTF+RKDQ++YLC +  A GTNP +GV TR+SLGC
Sbjct:   93 SDSKIAKGAASTSGDKGIAAQSGIATRGVILDYSDFSGKDLSGVSFQQSIVRKTNFXXXXXXXXXXFDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIINEAYISGSTVLRDINIKDSDWTDTFVRKDQLQYLCQI--ASGTNPTTGVGTRESLGC 248          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1076.534.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7U8_ECTSI3.680e-13396.76Thylakoid lumenal 15 kDa protein, chloroplast (P15... [more]
A0A835YUD1_9STRA7.790e-4972.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2CVZ3_9STRA1.860e-3461.14Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A448ZI41_9STRA2.990e-2948.50Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
W7U2G1_9STRA1.710e-2861.69Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S0TH33_HEMAN1.910e-2662.91Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A4D9CRG8_9STRA2.440e-2648.48Rhomboid domain-containing protein n=1 Tax=Nannoch... [more]
A0A1E7FD64_9STRA6.230e-2650.00Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S3Y7I5_9EUKA6.890e-2661.39Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2TUI3_9EUKA7.210e-2661.39Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.20.100coord: 103..247
e-value: 1.7E-34
score: 120.2
NoneNo IPR availablePANTHERPTHR47200FAMILY NOT NAMEDcoord: 64..246
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..247
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..20
score: 0.52
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 114..216
IPR001646Pentapeptide repeatPFAMPF13599Pentapeptide_4coord: 119..188
e-value: 2.3E-8
score: 34.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1076contigE-siliculosus-1a_F_contig1076:18177..21347 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1076.534.1mRNA_E-siliculosus-1a_F_contig1076.534.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1076 17596..21347 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1076.534.1 ID=prot_E-siliculosus-1a_F_contig1076.534.1|Name=mRNA_E-siliculosus-1a_F_contig1076.534.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=248bp
MATMIMKGLVVSAGVAGVAGFVPPSAGRSTAWRGHQVKMNLFNDAARCVP
AVLLGVALTTSAPLLDSPATHTHTAVLGASPVFADDKGMSSVSDSKLSVG
AASTGDKGARKTVTRGVNIENADYHDKDLSSVSFQQSLVRGTNFKNAKLV
AAGFFDADLSNCNFESANMNQANLELANLSGANMKNALVTEAYVSGATKM
EPAIIEGADFTDTFLRKDQVRYLCGLDTAKGTNPVSGVDTRDSLGCP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat