prot_E-siliculosus-1a_F_contig1075.526.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1075.526.1
Unique Nameprot_E-siliculosus-1a_F_contig1075.526.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length375
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1075.526.1 vs. uniprot
Match: D7G1Z3_ECTSI (Catabolite repression protein creC n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z3_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 4.010e-96
Identity = 291/309 (94.17%), Postives = 292/309 (94.50%), Query Frame = 0 
Query:   35 YVYPALSRQSTPRGEPLCCKRLAQVPLSQVMVVRAGVVTLCAEGLLKLWARPTMPPPLPPLQMDGADFGREKGDDSGSGGTSAAMDGQQEEAGTASPPLESSSLRSSPSYRGKAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGLSVVGVAPSSGGGNKNDPSSRGGKNANAAVVSPLQPAALDALINTEILTPRADGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGFSALSAANAKGRDPSELKGRKTASP 343
            YVYPALSRQSTPRGEPLCCKRLAQVPLSQVMVVRAGVVTLCAEGLLKLWARPTMPPPLPPLQMDGADFGR KGDDSGSGGTSAAMDGQQEEAGTASP LESSSLRSSPSYRGK V     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    ATAAGLSVVGV PSSGGG+KNDPSSRGGKNANAAVVSPLQPAALDALINTEILTPRADG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GFSALSAANAKGRDPSELKGRK ASP
Sbjct:  852 YVYPALSRQSTPRGEPLCCKRLAQVPLSQVMVVRAGVVTLCAEGLLKLWARPTMPPPLPPLQMDGADFGRGKGDDSGSGGTSAAMDGQQEEAGTASPSLESSSLRSSPSYRGKTVAASVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAE-ATAAGLSVVGVDPSSGGGSKNDPSSRGGKNANAAVVSPLQPAALDALINTEILTPRADGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSALSAANAKGRDPSELKGRKAASP 1159
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BLAST of mRNA_E-siliculosus-1a_F_contig1075.526.1 vs. uniprot
Match: A0A6H5L471_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L471_9PHAE)

HSP 1 Score: 316 bits (810), Expect = 3.530e-94
Identity = 275/319 (86.21%), Postives = 282/319 (88.40%), Query Frame = 0 
Query:   33 AGYVYPALSRQSTPRGEPLCCKRLAQVPLSQVMVVRAGVVTLCAEGLLKLWARPTMPPPLPPLQMDGADFGREKGDDSGSGGTSAAMDGQQEEAGTASPPLESSSLRSSPSYRGKAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAAGLSVVGVAPSSGGGNKNDPSSRGGKNANAAVVSPLQPAALDALINTEILTPRADGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---GFSALSAANAKGRDPSELKGRKTASPPDTRG 348
            AG+VYPALSRQ TPRGEPLCCKRLAQVPLSQVMVVRAGVVTLCA+GLLKLWARPTMPPPLPPLQ+DGADFGR+KGD+SGSGGTSAAM+ QQEEAGTASP LESSSLRSSPSYRGKAV     XXXXXXXXXXXXXXXXXXXXX                     TAAGLSVVGV PSSGGGNKNDPSSR G+NANAAVVSPLQPAALDALINTEILTPRADG GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GFSALSAANAKGRDPSELKGRK ASPPDTRG
Sbjct:  988 AGHVYPALSRQLTPRGEPLCCKRLAQVPLSQVMVVRAGVVTLCADGLLKLWARPTMPPPLPPLQVDGADFGRKKGDNSGSGGTSAAMESQQEEAGTASPSLESSSLRSSPSYRGKAVAASVGXXXXXXXXXXXXXXXXXXXXXPGASASAGAVTTMAVNEP---TAAGLSVVGVDPSSGGGNKNDPSSRVGRNANAAVVSPLQPAALDALINTEILTPRADGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFSALSAANAKGRDPSELKGRKAASPPDTRG 1303
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BLAST of mRNA_E-siliculosus-1a_F_contig1075.526.1 vs. uniprot
Match: A0A836CCN0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCN0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.520e-14
Identity = 41/73 (56.16%), Postives = 50/73 (68.49%), Query Frame = 0 
Query:   28 ESGGGAGYVYPA------LSRQSTPRGEPLCCKRLAQVPLSQVMVVRAGVVTLCAEGLLKLWARPTMPPPLPP 94
            E+G GAG   P       L    TP G PLCCK+LA++PL+QV V+R G+VTLC EGLLK+W RP +PPP PP
Sbjct:  777 EAGEGAGGTAPESKFNPPLKITETPTGTPLCCKQLARLPLTQVAVLRCGIVTLCEEGLLKVWQRPVIPPPQPP 849
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1075.526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1Z3_ECTSI4.010e-9694.17Catabolite repression protein creC n=1 Tax=Ectocar... [more]
A0A6H5L471_9PHAE3.530e-9486.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCN0_9STRA3.520e-1456.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1075contigE-siliculosus-1a_F_contig1075:1510..3184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1075.526.1mRNA_E-siliculosus-1a_F_contig1075.526.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1075 1510..3185 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1075.526.1 ID=prot_E-siliculosus-1a_F_contig1075.526.1|Name=mRNA_E-siliculosus-1a_F_contig1075.526.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=375bp
KGGGGAGAAQGKAAEEEEGRGKEDEGRESGGGAGYVYPALSRQSTPRGEP
LCCKRLAQVPLSQVMVVRAGVVTLCAEGLLKLWARPTMPPPLPPLQMDGA
DFGREKGDDSGSGGTSAAMDGQQEEAGTASPPLESSSLRSSPSYRGKAVA
ASVGGGSGGGTAAAPAAAVRNATSSSAPGASTSAGAASTTTAVAEATAAG
LSVVGVAPSSGGGNKNDPSSRGGKNANAAVVSPLQPAALDALINTEILTP
RADGSGGGGGGATGTGGPSNGKKKGFFAKVIFSKSAAGRNGGGGGGTGGG
GGSGAGSRQYNNNDDSGGFSALSAANAKGRDPSELKGRKTASPPDTRGGS
SAVAASAGGEATGSAAAASGRGTRG
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