mRNA_E-siliculosus-1a_F_contig1073.522.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Properties


Property Name	Value
Start	1
Stop	1
Cds size	420
Model size	438
Exons	1
Ec32 ortholog	Ec-28_002740.1
Ec32 ortholog description	Hypothetical protein
Hectar predicted targeting category	other localisation

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1073:31792..32229-
coding sequence from alignment at E-siliculosus-1a_F_contig1073:31792..32229-

protein sequence of mRNA_E-siliculosus-1a_F_contig1073.522.1

>prot_E-siliculosus-1a_F_contig1073.522.1 ID=prot_E-siliculosus-1a_F_contig1073.522.1|Name=mRNA_E-siliculosus-1a_F_contig1073.522.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=140bp
MYPTSPILSTPASKKPLCAATSRLRSVCRWGCLQGHFRGGVLACAGEEGV
SSPKHDALGVMQRAPPPQIPPADMSGDCKTSSRLGDASTIGLRQPRDAGA
YTPLERFAFGPLDIALLLVRGLEDKPGMEELHMLMPAGS*

mRNA from alignment at E-siliculosus-1a_F_contig1073:31792..32229-

Legend: UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1073.522.1 ID=mRNA_E-siliculosus-1a_F_contig1073.522.1|Name=mRNA_E-siliculosus-1a_F_contig1073.522.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=438bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1073:31792..32229- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GTAGAGGCCGACGAGACGATGTACCCGACCTCTCCCATTCTTTCGACGCC
AGCTTCGAAGAAGCCGCTTTGCGCCGCCACCTCTCGGCTGCGTTCTGTCT
GTCGGTGGGGGTGTTTGCAGGGCCATTTTCGCGGCGGCGTACTCGCTTGC
GCTGGCGAAGAAGGCGTTTCGAGTCCAAAGCACGACGCGCTCGGTGTCAT
GCAACGCGCCCCGCCACCGCAGATTCCCCCCGCAGACATGTCTGGTGACT
GTAAGACTTCCTCGCGTCTTGGAGACGCCAGCACGATAGGCTTGCGGCAG
CCCCGCGACGCTGGTGCGTACACACCTCTCGAGCGGTTCGCGTTCGGACC
ACTAGACATCGCCCTGCTGCTCGTGAGAGGCCTCGAGGACAAGCCTGGTA
TGGAGGAGCTCCATATGCTCATGCCGGCGGGTTCTTGA

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1073:31792..32229-

>mRNA_E-siliculosus-1a_F_contig1073.522.1 ID=mRNA_E-siliculosus-1a_F_contig1073.522.1|Name=mRNA_E-siliculosus-1a_F_contig1073.522.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=840bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1073:31792..32229- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTACCCGACCTCTCCCATTCTTTCGACGCCAGCTTCGAAGAAGCCGCT
TTGCGCCGCCACCTCTCGGCTGCGTTCTGTCTGTCGGTGGGGGTGTTTGC
AGGGCCATTTTCGCGGCGGCGTACTCGCTTGCGCTGGCGAAGAAGGCGTT
TCGAGTCCAAAGCACGACGCGCTCGGTGTCATGCAACGCGCCCCGCCACC
GCAGATTCCCCCCGCAGACATGTCTGGTGACTGTAAGACTTCCTCGCGTC
TTGGAGACGCCAGCACGATAGGCTTGCGGCAGCCCCGCGACGCTGGTGCG
TACACACCTCTCGAGCGGTTCGCGTTCGGACCACTAGACATCGCCCTGCT
GCTCGTGAGAGGCCTCGAGGACAAGCCTGGTATGGAGGAGCTCCATATGC
TCATGCCGGCGGGTTCTTGAATGTACCCGACCTCTCCCATTCTTTCGACG
CCAGCTTCGAAGAAGCCGCTTTGCGCCGCCACCTCTCGGCTGCGTTCTGT
CTGTCGGTGGGGGTGTTTGCAGGGCCATTTTCGCGGCGGCGTACTCGCTT
GCGCTGGCGAAGAAGGCGTTTCGAGTCCAAAGCACGACGCGCTCGGTGTC
ATGCAACGCGCCCCGCCACCGCAGATTCCCCCCGCAGACATGTCTGGTGA
CTGTAAGACTTCCTCGCGTCTTGGAGACGCCAGCACGATAGGCTTGCGGC
AGCCCCGCGACGCTGGTGCGTACACACCTCTCGAGCGGTTCGCGTTCGGA
CCACTAGACATCGCCCTGCTGCTCGTGAGAGGCCTCGAGGACAAGCCTGG
TATGGAGGAGCTCCATATGCTCATGCCGGCGGGTTCTTGA

mRNA_E-siliculosus-1a_F_contig1073.522.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

ZOOM

x 1

POSITION

0