Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 0 |
| Stop | 1 |
| Cds size | 243 |
| Model size | 347 |
| Exons | 3 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622927574.3211932-UTR-E-siliculosus-1a_F_contig1073:6753..6856 | 1622927574.3211932-UTR-E-siliculosus-1a_F_contig1073:6753..6856 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1073 6754..6856 - |
| 1696318593.0935729-UTR-E-siliculosus-1a_F_contig1073:6753..6856 | 1696318593.0935729-UTR-E-siliculosus-1a_F_contig1073:6753..6856 | Ectocarpus siliculosus Ec863f_EcPH12_90f female | UTR | E-siliculosus-1a_F_contig1073 6754..6856 - |
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig1073.519.1 >prot_E-siliculosus-1a_F_contig1073.519.1 ID=prot_E-siliculosus-1a_F_contig1073.519.1|Name=mRNA_E-siliculosus-1a_F_contig1073.519.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=81bp
TDTSQPVERASQPQDVVPPATQVRGDFSSLLRRIQHKLPLASSTSGIYQQ
PRGKRELCPRRRTLLVVALLVHLVTSRAQR* back to topmRNA from alignment at E-siliculosus-1a_F_contig1073:6754..8304- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_F_contig1073.519.1 ID=mRNA_E-siliculosus-1a_F_contig1073.519.1|Name=mRNA_E-siliculosus-1a_F_contig1073.519.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1551bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1073:6754..8304- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACAGACACGTCTCAACCAGTGGAGAGAGCTAGCCAACCACAGGTGAGTGG
GAGGAATGGTGTTGCATCGAATCAATTCTGAGACTTGCACGATGAAGCCT
CGGGTTAAGCGACTCTCACCGGGTTGTCGGAGGTCGCTTGTCGGATCTCG
GCGCCACATTCACGCTTAGCACCGCGGTACAGCAGTAGACCTTCCTTCTA
ACCCCGCCCCATGTGTGTTCGTGTGGGTAGAGGGAGATGGGGTGGTTTGG
TAGCAACGACTGTGAGCGAGACACACATGAAGCAAGCACCCCGTGGCTAG
CCGAGCGTCCTAGCTCTTGTGGCCAAGATCAGTAGAATGTTGTGTTGGAG
CGTTTCGGCCTACTGCTGCAGCAGAGGTTGCGTTGTTGTCCAGCTGGCTG
CACTTGACCATGGGACCATTGCTCTTTTCCCCGCCGATGGCTGCACACTA
TAAACGTAGTCACAGGGCCTGCTGCTGTCCCACTAGCTTTCTCACCGTCC
CCACGCATTTTCCACCTGCCACACAAGTTCAGGACGTTGTTCCACCTGCC
ACACAAGTGCGGGGGGATTTTTCATCTCTTCTCCGACGTATTCAGCACAA
GCTACCTCTTGCTAGCAGCACAAGGTACTTGTAACTGCTGTTCTTTTGGG
TTCCAGCAGTAGGAGGAGAGCTCCAAACCCGACGGAGACACACACACAAC
CTCGCGCACGAACAACAGTGTTGGCAGTGACACCACACAAACCTGCTTGG
TGTGAGGAGCTATTTGTGCAGCATCGTTTTTGTGTGCCTAACAAGGATTC
CGCACCTATTCAGCCGCGGAGAATTGCCAGCATAGTTTTATGTACATCAA
TGTAGACAAATGGCCGTCTCAATCTCCGAAACAGAATCGGGTTAGGGTGC
GAGTGTGTTGATGGCGGTGACATATGTCCTATGACGCCGTCGCCGTAGAT
GGCGGTTCCCAGCCCCCCTCGGCTCCCTGGGTACACAGGCGCACAGCAGT
GGTGACACCTAGCCGAAAGTCATGCGCCTCCGCACGAGCATCGGCCGGGG
CGAGATAATTCCACCTTCAATCGATTCAGTACGAAACGAGTCACCAAAGA
AACGGGCGGGGAAGAGGAAAGTGCAGTCGAACACCGCCATTCTCCCGCAA
GGACCGTAAACCTGTGAGAACGTCGGCAAACACGCAGACCATAGGCATAC
ACCATATTAAAACCTTTCGTTTTCGTTGCACCCACTCCCTGACTACCACA
GCACCAGATGTTGTTCGCCTTTTGACGCGTAGAAGCTGACGCTACAAGTT
CCTCCCCTTCTCCCTCCGCGCACGGCGTACAACCCAAAGCGGAATCTACC
AACAGCCCAGGGGAAAAAGGGAGCTCTGTCCTCGCCGGCGGACTTTGCTG
GTGGTGGCGCTGCTTGTGCACCTTGTTACAAGTCGTGCACAGCGTTGAGC
TTGGCACGCCTGGGCCGTGTGTGTGTGTGTGTGTGTTTCAGCCCTGACTA
CTAGAGGGGGGCTCGCGCGCATAGAGGGGGGAGGGCAAGAGTCATCACGG
G back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1073:6754..8304- >mRNA_E-siliculosus-1a_F_contig1073.519.1 ID=mRNA_E-siliculosus-1a_F_contig1073.519.1|Name=mRNA_E-siliculosus-1a_F_contig1073.519.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=486bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1073:6754..8304- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ACAGACACGTCTCAACCAGTGGAGAGAGCTAGCCAACCACAGACAGACAC
GTCTCAACCAGTGGAGAGAGCTAGCCAACCACAGGACGTTGTTCCACCTG
CCACACAAGTGCGGGGGGATTTTTCATCTCTTCTCCGACGTATTCAGCAC
AAGCTACCTCTTGCTAGCAGCACAAGGACGTTGTTCCACCTGCCACACAA
GTGCGGGGGGATTTTTCATCTCTTCTCCGACGTATTCAGCACAAGCTACC
TCTTGCTAGCAGCACAAGCGGAATCTACCAACAGCCCAGGGGAAAAAGGG
AGCTCTGTCCTCGCCGGCGGACTTTGCTGGTGGTGGCGCTGCTTGTGCAC
CTTGTTACAAGTCGTGCACAGCGTTGACGGAATCTACCAACAGCCCAGGG
GAAAAAGGGAGCTCTGTCCTCGCCGGCGGACTTTGCTGGTGGTGGCGCTG
CTTGTGCACCTTGTTACAAGTCGTGCACAGCGTTGA back to top
|