prot_E-siliculosus-1a_F_contig10725.518.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10725.518.1
Unique Nameprot_E-siliculosus-1a_F_contig10725.518.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length152
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig10725.518.1 vs. uniprot
Match: D8LBB2_ECTSI (Novel protein (Wu:fd05a10) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBB2_ECTSI)

HSP 1 Score: 240 bits (613), Expect = 1.400e-76
Identity = 118/125 (94.40%), Postives = 122/125 (97.60%), Query Frame = 0 
Query:   29 MDYHQHRQGGGKLYAQAPS-GDHASIVSSIAPFDTVCSGGSTSTSSSNARRSLDESEVLRCINEYRREHGAPMLRWSSACAREAQRRASHESGPSAEYGENLARSTDHSWRDPTIACIGSIHRWQ 152
            M+YHQHRQGGGKLYAQ PS GDHASIVSSIAPFDTVCSGGS+ST+SSNARR LDESEVLRCINEYRREHGAPMLRWSSACAREAQRRASHESGPSAEYGENLARSTDHSWRDPTIACIGSIH+WQ
Sbjct:    1 MEYHQHRQGGGKLYAQTPSSGDHASIVSSIAPFDTVCSGGSSSTTSSNARRILDESEVLRCINEYRREHGAPMLRWSSACAREAQRRASHESGPSAEYGENLARSTDHSWRDPTIACIGSIHQWQ 125
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BLAST of mRNA_E-siliculosus-1a_F_contig10725.518.1 vs. uniprot
Match: A0A6H5J7K6_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7K6_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 2.370e-48
Identity = 79/91 (86.81%), Postives = 79/91 (86.81%), Query Frame = 0 
Query:   62 TVCSGGSTSTSSSNARRSLDESEVLRCINEYRREHGAPMLRWSSACAREAQRRASHESGPSAEYGENLARSTDHSWRDPTIACIGSIHRWQ 152
            TV SG          RRSLDESEVL CINEYRREHGAPMLRWSSACAREAQRRASHESGPSAEYGENLARSTDHSWRDPTIACIGSIHRWQ
Sbjct:    3 TVSSGXXXXXXXXXTRRSLDESEVLCCINEYRREHGAPMLRWSSACAREAQRRASHESGPSAEYGENLARSTDHSWRDPTIACIGSIHRWQ 93
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10725.518.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBB2_ECTSI1.400e-7694.40Novel protein (Wu:fd05a10) n=1 Tax=Ectocarpus sili... [more]
A0A6H5J7K6_9PHAE2.370e-4886.81SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014044CAP domainPFAMPF00188CAPcoord: 86..117
e-value: 2.7E-4
score: 21.8
IPR035940CAP superfamilyGENE3D3.40.33.10coord: 76..151
e-value: 9.2E-8
score: 34.3
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 82..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10725contigE-siliculosus-1a_F_contig10725:1227..1845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10725.518.1mRNA_E-siliculosus-1a_F_contig10725.518.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10725 1225..1845 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10725.518.1 ID=prot_E-siliculosus-1a_F_contig10725.518.1|Name=mRNA_E-siliculosus-1a_F_contig10725.518.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=152bp
VNFFTYIALLAHSHPTSLSSSYTAAPTPMDYHQHRQGGGKLYAQAPSGDH
ASIVSSIAPFDTVCSGGSTSTSSSNARRSLDESEVLRCINEYRREHGAPM
LRWSSACAREAQRRASHESGPSAEYGENLARSTDHSWRDPTIACIGSIHR
WQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035940CAP_sf
IPR014044CAP_domain