prot_E-siliculosus-1a_F_contig10723.517.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig10723.517.1
Unique Nameprot_E-siliculosus-1a_F_contig10723.517.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length91
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10723.517.1 vs. uniprot
Match: A0A6H5KYH6_9PHAE (Vps54_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH6_9PHAE)

HSP 1 Score: 166 bits (421), Expect = 2.390e-46
Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
Query:    1 MRVPQLQRRRSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVAL 91
            MRVPQLQRRRSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVAL
Sbjct:  370 MRVPQLQRRRSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVAL 460          
BLAST of mRNA_E-siliculosus-1a_F_contig10723.517.1 vs. uniprot
Match: D7G0A0_ECTSI (Vacuolar protein sorting-associated protein 54 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A0_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 2.160e-45
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0
Query:    1 MRVPQLQRRRSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVAL 91
            MRVPQLQRRR NLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVAL
Sbjct:  285 MRVPQLQRRRGNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVAL 375          
BLAST of mRNA_E-siliculosus-1a_F_contig10723.517.1 vs. uniprot
Match: A0A835YJU9_9STRA (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU9_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 4.810e-17
Identity = 41/91 (45.05%), Postives = 65/91 (71.43%), Query Frame = 0
Query:    1 MRVPQLQRRRSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVAL 91
            +RVPQL +R+ NL SL+  LELV  +++S+ A+E LLAA+DY GALD+L+ A+  +  +L  +H LR   RQ+ EYE+L   +L++R +++
Sbjct:  322 IRVPQLAQRQQNLMSLQGYLELVQSIERSKLAVEPLLAADDYSGALDVLEGARRALARDLSDMHCLRAASRQMSEYEDLAFAMLTSRLLSV 412          
BLAST of mRNA_E-siliculosus-1a_F_contig10723.517.1 vs. uniprot
Match: A9UVF0_MONBE (Vacuolar protein sorting-associated protein 54 n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UVF0_MONBE)

HSP 1 Score: 64.7 bits (156), Expect = 3.840e-10
Identity = 34/86 (39.53%), Postives = 58/86 (67.44%), Query Frame = 0
Query:    6 LQRRRSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVAL 91
            L RRR N  +L   L ++A V  SQ+A++ LLAA DY+GAL+++Q+ +  +  EL  +H++R++  QL+E + LVS ++   F+A+
Sbjct:  267 LLRRRRNYGTLIDKLSVLAAVASSQSAVQRLLAASDYVGALELIQTTQEILTAELNGVHAMRHMASQLEEIKALVSRVVETDFLAV 352          
BLAST of mRNA_E-siliculosus-1a_F_contig10723.517.1 vs. uniprot
Match: A0A553Q812_9TELE (Vacuolar protein sorting-associated protein 54 n=2 Tax=Danionella translucida TaxID=623744 RepID=A0A553Q812_9TELE)

HSP 1 Score: 60.5 bits (145), Expect = 1.180e-8
Identity = 29/77 (37.66%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    8 RRRSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLL 84
            R R+N  +L+A L+L+A +QQ+Q  ++ LLA  ++ GAL+++ ++K  ++ EL  +HS R++G QL E E L+  ++
Sbjct:  291 RSRNNCVALQAKLQLMAALQQTQPTVQLLLAGGEFTGALELISTSKEVLQQELQGIHSFRHLGSQLCEMERLIDKMM 367          
BLAST of mRNA_E-siliculosus-1a_F_contig10723.517.1 vs. uniprot
Match: UPI0019C61E13 (vacuolar protein sorting-associated protein 54 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI0019C61E13)

HSP 1 Score: 58.2 bits (139), Expect = 7.710e-8
Identity = 27/75 (36.00%), Postives = 50/75 (66.67%), Query Frame = 0
Query:   10 RSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLL 84
            R N  +L   L+L+A VQQ+Q  ++ LL+  +++GAL+++ + K  ++ EL  +HS R++G QL E E+L+  ++
Sbjct:  288 RKNCVALHGKLKLMAAVQQTQPTVQLLLSTSEFVGALELINTTKEVLQQELQGIHSFRHLGSQLCEMEKLIDKMM 362          
BLAST of mRNA_E-siliculosus-1a_F_contig10723.517.1 vs. uniprot
Match: W5U8J1_ICTPU (Vacuolar protein sorting-associated protein 54 n=7 Tax=Siluroidei TaxID=1489793 RepID=W5U8J1_ICTPU)

HSP 1 Score: 57.8 bits (138), Expect = 1.050e-7
Identity = 27/75 (36.00%), Postives = 50/75 (66.67%), Query Frame = 0
Query:   10 RSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLL 84
            R N  +L   L+L+A VQQ+Q  ++ LL+  +++GAL+++ + K  ++ EL  +HS R++G QL E E+L+  ++
Sbjct:  288 RRNCVTLHGKLKLMAAVQQTQPTVQLLLSTSEFVGALELINTTKEVLQQELQGIHSFRHLGSQLCEMEKLIDKMM 362          
BLAST of mRNA_E-siliculosus-1a_F_contig10723.517.1 vs. uniprot
Match: A0A267GUK0_9PLAT (Vacuolar protein sorting-associated protein 54 n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GUK0_9PLAT)

HSP 1 Score: 53.9 bits (128), Expect = 2.350e-6
Identity = 32/83 (38.55%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    8 RRRSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVA 90
            RRR+ +++LE  LEL+  V+ +Q  I+ LLAA DY GALD++ SA+  +  +L  LH  R++  QL E  + V  ++ +  V+
Sbjct:  253 RRRNCVAALER-LELLLSVRATQPTIQQLLAATDYCGALDLMNSAQEALGQQLRGLHCCRHLHSQLVELRKFVGQMVESELVS 334          
BLAST of mRNA_E-siliculosus-1a_F_contig10723.517.1 vs. uniprot
Match: A0A267FK70_9PLAT (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267FK70_9PLAT)

HSP 1 Score: 53.9 bits (128), Expect = 2.390e-6
Identity = 32/83 (38.55%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    8 RRRSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVA 90
            RRR+ +++LE  LEL+  V+ +Q  I+ LLAA DY GALD++ SA+  +  +L  LH  R++  QL E  + V  ++ +  V+
Sbjct:  326 RRRNCVAALER-LELLLSVRATQPTIQQLLAATDYCGALDLMNSAQEALGQQLRGLHCCRHLHSQLVELRKFVGQMVESELVS 407          
BLAST of mRNA_E-siliculosus-1a_F_contig10723.517.1 vs. uniprot
Match: A0A1I8HG00_9PLAT (Vacuolar protein sorting-associated protein 54 n=7 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8HG00_9PLAT)

HSP 1 Score: 53.9 bits (128), Expect = 2.410e-6
Identity = 32/83 (38.55%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    8 RRRSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQSAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVA 90
            RRR+ +++LE  LEL+  V+ +Q  I+ LLAA DY GALD++ SA+  +  +L  LH  R++  QL E  + V  ++ +  V+
Sbjct:  693 RRRNCVAALER-LELLLSVRATQPTIQQLLAATDYCGALDLMNSAQEALGQQLRGLHCCRHLHSQLVELRKFVGQMVESELVS 774          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10723.517.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KYH6_9PHAE2.390e-46100.00Vps54_N domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0A0_ECTSI2.160e-4598.90Vacuolar protein sorting-associated protein 54 n=1... [more]
A0A835YJU9_9STRA4.810e-1745.05Vacuolar protein sorting-associated protein 54 (Fr... [more]
A9UVF0_MONBE3.840e-1039.53Vacuolar protein sorting-associated protein 54 n=1... [more]
A0A553Q812_9TELE1.180e-837.66Vacuolar protein sorting-associated protein 54 n=2... [more]
UPI0019C61E137.710e-836.00vacuolar protein sorting-associated protein 54 n=1... [more]
W5U8J1_ICTPU1.050e-736.00Vacuolar protein sorting-associated protein 54 n=7... [more]
A0A267GUK0_9PLAT2.350e-638.55Vacuolar protein sorting-associated protein 54 n=1... [more]
A0A267FK70_9PLAT2.390e-638.55Vacuolar protein sorting-associated protein 54 (Fr... [more]
A0A1I8HG00_9PLAT2.410e-638.55Vacuolar protein sorting-associated protein 54 n=7... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039745Vacuolar protein sorting-associated protein 54PANTHERPTHR12965VACUOLAR PROTEIN SORTING 54coord: 2..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig10723contigE-siliculosus-1a_F_contig10723:469..1192 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig10723.517.1mRNA_E-siliculosus-1a_F_contig10723.517.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig10723 463..1192 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig10723.517.1 ID=prot_E-siliculosus-1a_F_contig10723.517.1|Name=mRNA_E-siliculosus-1a_F_contig10723.517.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=91bp
MRVPQLQRRRSNLSSLEATLELVARVQQSQAAIEGLLAAEDYLGALDILQ
SAKSTVKNELGKLHSLRNVGRQLKEYEELVSGLLSNRFVAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039745Vps54