Homology
BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match:
D8LS72_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS72_ECTSI)
HSP 1 Score: 294 bits (752), Expect = 3.200e-91
Identity = 156/160 (97.50%), Postives = 156/160 (97.50%), Query Frame = 1
Query: 1 GGWCSATRDDDDGPHDXXXXXXXXXXXXXX--APGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSV 474
GGWCSATRDDDDGPHD XXXXXXXXXXXX APGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSV
Sbjct: 445 GGWCSATRDDDDGPHDREXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSV 604
BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match:
A0A6H5JK59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK59_9PHAE)
HSP 1 Score: 288 bits (736), Expect = 9.640e-88
Identity = 147/160 (91.88%), Postives = 147/160 (91.88%), Query Frame = 1
Query: 1 GGWCSATRDDDDGPHDXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAD--KSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSV 474
GGWCSATRDDDDGPHD XXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEA KSTSLLHAPEILMLHVKRFRRGY WSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRA GTSGGDAHRKSSV
Sbjct: 443 GGWCSATRDDDDGPHDRDHEGRASXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTSLLHAPEILMLHVKRFRRGYFWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRAPGTSGGDAHRKSSV 602
BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match:
UPI000F67000D (ubiquitin carboxyl-terminal hydrolase 20-like n=1 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F67000D)
HSP 1 Score: 87.8 bits (216), Expect = 3.180e-17
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 1
Query: 133 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWL 390
WL +V+L CL AFFS + L+G N Y C+ CG + K + ++H PE+L++H+KRFR Y++S K+ V FPLH LD++ +L
Sbjct: 242 WLWGPAVSLHHCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVVHLPEVLIIHLKRFRHEYMFSSKISQYVSFPLHGLDLTPFL 327
BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match:
UPI001C70FF2F (ubiquitin carboxyl-terminal hydrolase 20-like isoform X1 n=15 Tax=Penaeus TaxID=133894 RepID=UPI001C70FF2F)
HSP 1 Score: 87.8 bits (216), Expect = 3.350e-17
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 1
Query: 133 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWL 390
WL +V+L CL AFFS + L+G N Y C+ CG + K + ++H PE+L++H+KRFR Y++S K+ V FPLH LD++ +L
Sbjct: 531 WLWGPAVSLHHCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVVHLPEVLIIHLKRFRHEYMFSSKISQYVSFPLHGLDLTPFL 616
BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match:
A0A7R9DS79_TIMPO (Hypothetical protein n=1 Tax=Timema poppense TaxID=170557 RepID=A0A7R9DS79_TIMPO)
HSP 1 Score: 81.6 bits (200), Expect = 4.130e-17
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 1
Query: 133 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWL 390
W +V+L DCL AFFS + L+G N Y C+ C + K + +L PE+L +H+KRFR ++S K++N V FPL +LD+ +L
Sbjct: 29 WFWGPTVSLHDCLAAFFSADELKGDNMYSCEKCNKLRNGVKYSKVLELPEVLCIHLKRFRHELMFSSKINNYVSFPLEELDMRPYL 114
BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match:
A0A1I8AR30_9BILA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8AR30_9BILA)
HSP 1 Score: 86.3 bits (212), Expect = 1.130e-16
Identity = 37/90 (41.11%), Postives = 58/90 (64.44%), Query Frame = 1
Query: 148 SVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSV 417
+++L+DCL AFFSP+ L+G + Y C+ C + K+ + PEIL +H+KRFR Y++S KV V FP+ D+D+S +L D+ S +
Sbjct: 441 AISLDDCLKAFFSPDHLKGEDMYSCEKCAKLRNGVKTCRITKLPEILCIHLKRFRHDYMYSTKVSTSVTFPICDMDLSEFLCDNVQPSDM 530
BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match:
A0A267GT82_9PLAT (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GT82_9PLAT)
HSP 1 Score: 84.7 bits (208), Expect = 3.880e-16
Identity = 36/80 (45.00%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 151 VALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWL 390
V+L+DCLDAFFS + L+G N YHC CG + K + + PE+L +H+KRFR + +S K+H+ V FP+ +LD+ +L
Sbjct: 452 VSLQDCLDAFFSNDDLKGDNMYHCAKCGKLRNGIKYSRISRLPEMLTVHLKRFRHDFAYSSKIHSHVAFPVDELDMKPYL 531
BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match:
A0A293LI95_ORNER (Ubiquitinyl hydrolase 1 (Fragment) n=2 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LI95_ORNER)
HSP 1 Score: 84.3 bits (207), Expect = 3.940e-16
Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 1
Query: 133 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWL 390
WL +++L+DCL AFFS + L+G N Y CD C + K + +L PE+L +H+KRFR ++S K+ N V FPL LD+S +L
Sbjct: 8 WLWGPTISLQDCLSAFFSADELKGDNMYSCDKCHKLRNGVKFSKVLQLPEVLCVHLKRFRHEVMFSSKISNYVSFPLEGLDMSPFL 93
BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match:
A0A4U5NEF0_STECR (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5NEF0_STECR)
HSP 1 Score: 84.3 bits (207), Expect = 5.180e-16
Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 145 KSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDH 399
+++L+DCL +FFSP+ LRG + Y C+ C + K+ + PEIL +H+KRFR Y++S KV V FP+ DLD+S +L ++
Sbjct: 308 SAISLDDCLKSFFSPDHLRGDDMYSCEKCAKLRNGVKTCRITKLPEILCIHLKRFRHDYVYSTKVSTSVTFPICDLDLSEFLCEN 392
BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match:
A0A5N5SYD6_9CRUS (Ubiquitinyl hydrolase 1 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5SYD6_9CRUS)
HSP 1 Score: 84.3 bits (207), Expect = 5.230e-16
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 133 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWL 390
WL SV+L +CL AFFS + L+G N Y C+ CG + K + ++ PEIL++H+KRFR Y++S K+ V FP+ LD+S +L
Sbjct: 299 WLWGPSVSLFNCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVIELPEILIIHLKRFRHEYMYSSKISQYVAFPVQGLDLSPFL 384
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 3.20e-91 / Id = 97.50 Expect = 9.64e-88 / Id = 91.88 Expect = 3.18e-17 / Id = 44.19 Expect = 3.35e-17 / Id = 44.19 Expect = 4.13e-17 / Id = 41.86 Expect = 1.13e-16 / Id = 41.11 Expect = 3.88e-16 / Id = 45.00 Expect = 3.94e-16 / Id = 44.19 Expect = 5.18e-16 / Id = 42.35 Expect = 5.23e-16 / Id = 44.19 Sequence D8LS72_ECTSI A0A6H5JK59_9PHAE UPI000F67000D UPI001C70FF2F A0A7R9DS79_TIMPO A0A1I8AR30_9BILA A0A267GT82_9PLAT A0A293LI95_ORNER A0A4U5NEF0_STECR A0A5N5SYD6_9CRUS Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 0 Stop 0 Cds size 474 Model size 475 Exons 4 Hectar predicted targeting category other localisation BRITE ko00000,ko00001,ko01000,ko01002,ko04121,ko04131 Best eggNOG OG NA|NA|NA Best tax level Eukaryota COG Functional cat. O EC 3.4.19.12 EggNOG OGs COG5077@1,COG5560@1,KOG1870@2759,KOG4598@2759 EggNOG free text desc. thiol-dependent ubiquitin-specific protease activity GOs GO:0003674,GO:0003824,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006464,GO:0006508,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016569,GO:0016570,GO:0016578,GO:0016579,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0019783,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0036211,GO:0036459,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0065007,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0099114,GO:0101005,GO:0140096,GO:1901564,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 KEGG Pathway ko04137,map04137 KEGG ko ko:K11848,ko:K11851,ko:K11857,ko:K11873 Seed eggNOG ortholog 2880.D8LS72 Seed ortholog evalue 5.3e-78 Seed ortholog score 297.0 Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig10718.513.1
>prot_E-siliculosus-1a_F_contig10718.513.1 ID=prot_E-siliculosus-1a_F_contig10718.513.1|Name=mRNA_E-siliculosus-1a_F_contig10718.513.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=158bp
GGWCSATRDDDDGPHDRDHEGRGSGGGGGGAPGYFGGLVSSLGVWLGFKS back to top mRNA from alignment at E-siliculosus-1a_F_contig10718:344..2276-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig10718.513.1 ID=mRNA_E-siliculosus-1a_F_contig10718.513.1|Name=mRNA_E-siliculosus-1a_F_contig10718.513.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1933bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10718:344..2276- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)GGGGGGTGGTGCTCGGCGACCCGAGACGACGACGACGGCCCCCACGATCG
AGACCACGAGGGCAGAGGGAGCGGTGGCGGTGGCGGTGGTGCCCCGGGGT
ACTTTGGGGGGCTGGTCTCTTCGCTGGGCGTGTGGCTGGGATTCAAGAGC
GTCGCCCTCGAG GTGCGTTTTTTTTTTCTTGTTTTCTTTGTGGGGCATTC
TGCTGCTGCTGTTGCTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTG
CTGTTGCTGCTGTTGCTGCAGCTGCGTTTATTAGTATGTTGTTGTTAAGG
AAGTTGAGCATGTTCCATTTGGTAATCAGGAGCCGCGAATGCAACGAGAG
CGACGCACGACGGGATTCTGGATGGCAACCGTCAAGGGAGGGAGAGAGGG
AGGGCTCACTGCTGTCTCCATACATTGCTTTCCGCTCCCCAAGTCTTGGT
TGGACCCTTGGGTGATAACTTGATTGGTTTCTCTTGGACCCTCCTGTCGC
CTCAGGACTGTTTGGACGCCTTCTTTTCGCCGGAGCGGCTTCGCGGGGCT
AACCAGTACCACTGCGATGGCTGCGGTTGCAAGAAAGAAGCAG GCGAGTG
ATAAAAGTACCAGGATTTTTTTTATACATGTGCACGGGGAGCGTGCACCC
CGGAGCGAGGTCGTACGGCGCTGCTCTCCGCTTCCGCCTCTGTCTACCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTCTCCCCCCCCCCCC
GAGCTCGGTCNNNNNNNNNNGGTTTTTTTTTTCCATGGGGGCGGGGGGGG
GGCCCCCCGGGGGGGGGGCGGGCGGCGCTGCCCCCCCCTTCCCCCCTTGC
TTCCCCCCCCCCCCCCCCCCCCCATGTTTTCCTGGTTATGTCCGTGCCCC
GTTATCTGTGCAGTGGTTCCCGGTCTGTCTGCCTCCCCGTGTGTGTATGG
TTGTGCATATTTAGTATTTTGGGATAGACCGCGCTAAGTTGACTGCCTAT
TCAATATGAAGACCTCGACCTTTTGAAGCGGGAGAAAACGTGCAGCACTC
TTTGCTGCACCACGAAGCCCCCTGACCCGGAGGGAGTCCGTGGAAGAGGC
TGGTGTGTACGTTTGAGATTGCCTCATTGTTTTGACAAGACTCCCGCTGA
AAGGCTTGCCAATTAAACACGGCAGTCGTAGATAGCGGCATAGTGACAGA
AAAATGTGACGTCTGTGTTTCCTCGCCCTGGTTATCGTTTCCGTTTGTGC
TTGCCTCTGACTGTTTGCATGCTTGTTTGTGTGGGTCTCCCTCTTCGTCT
TGTGGCTCTTTCTTGCCGTCTTTGGCAGACAAATCGACGAGTCTCCTACA
CGCGCCCGAGATCTTGATGCTGCACGTTAAGAGATTTCGACGCGGGTACC
TCTGGAGCCACAAAGTGCACAACAG GTCAGGCCTCGAAGGACTCCACCTT
CCCCCCCAAAAGCATGTTCGTAGCCCCACCGTGGTAGCCTTTTGCTGTTC
TCTTCCAACTATTTACGTGGCCGTTGCTCTTTACTCTGTTCTTCGGTCGT
ATGTCTCTCGGTAGTGGTAGCGCTGGTATCGTGTCTGTCGCTTCTCGCTA
GCTCCCATGATCTCCACTCCTCCCTGCCCACCTCGAACAGGCCGGTTGGA
ACACCCTTTTCATGCTGGCGGGCGTCTATCGTGCCGCGCATTGTGTGATG
CTCGCGCCACTCATATGGCAACAGACAATGACACAAGTCTGATCCCATTT
CGTCAATGTGCACACACACACACACACCCTCCCGCCATGTCAACAACACA
AACAGGGTAGTCTTCCCGTTGCACGACTTGGACGTGAGCCGGTGGCTCTC
GGACCACGCCCTAGAGTCTTCGGTCAACCAGCAGCGCGCGTCCGGCACCA
GCGGCGGGGACGCCCACCGCAAGTCCTCCGTC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig10718:344..2276-
>mRNA_E-siliculosus-1a_F_contig10718.513.1 ID=mRNA_E-siliculosus-1a_F_contig10718.513.1|Name=mRNA_E-siliculosus-1a_F_contig10718.513.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=948bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig10718:344..2276- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) back to top