mRNA_E-siliculosus-1a_F_contig10718.513.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match: D8LS72_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS72_ECTSI)

HSP 1 Score: 294 bits (752), Expect = 3.200e-91
Identity = 156/160 (97.50%), Postives = 156/160 (97.50%), Query Frame = 1

Query:    1 GGWCSATRDDDDGPHDXXXXXXXXXXXXXX--APGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSV 474
            GGWCSATRDDDDGPHD  XXXXXXXXXXXX  APGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSV
Sbjct:  445 GGWCSATRDDDDGPHDREXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSV 604

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BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match: A0A6H5JK59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK59_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 9.640e-88
Identity = 147/160 (91.88%), Postives = 147/160 (91.88%), Query Frame = 1

Query:    1 GGWCSATRDDDDGPHDXXXXXXXXXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAD--KSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRASGTSGGDAHRKSSV 474
            GGWCSATRDDDDGPHD        XXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEA   KSTSLLHAPEILMLHVKRFRRGY WSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRA GTSGGDAHRKSSV
Sbjct:  443 GGWCSATRDDDDGPHDRDHEGRASXXXXXXAPGYFGGLVSSLGVWLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEAGEYKSTSLLHAPEILMLHVKRFRRGYFWSHKVHNRVVFPLHDLDVSRWLSDHALESSVNQQRAPGTSGGDAHRKSSV 602

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BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match: UPI000F67000D (ubiquitin carboxyl-terminal hydrolase 20-like n=1 Tax=Penaeus vannamei TaxID=6689 RepID=UPI000F67000D)

HSP 1 Score: 87.8 bits (216), Expect = 3.180e-17
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 1

Query:  133 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWL 390
            WL   +V+L  CL AFFS + L+G N Y C+ CG  +   K + ++H PE+L++H+KRFR  Y++S K+   V FPLH LD++ +L
Sbjct:  242 WLWGPAVSLHHCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVVHLPEVLIIHLKRFRHEYMFSSKISQYVSFPLHGLDLTPFL 327

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BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match: UPI001C70FF2F (ubiquitin carboxyl-terminal hydrolase 20-like isoform X1 n=15 Tax=Penaeus TaxID=133894 RepID=UPI001C70FF2F)

HSP 1 Score: 87.8 bits (216), Expect = 3.350e-17
Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 1

Query:  133 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWL 390
            WL   +V+L  CL AFFS + L+G N Y C+ CG  +   K + ++H PE+L++H+KRFR  Y++S K+   V FPLH LD++ +L
Sbjct:  531 WLWGPAVSLHHCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVVHLPEVLIIHLKRFRHEYMFSSKISQYVSFPLHGLDLTPFL 616

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BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match: A0A7R9DS79_TIMPO (Hypothetical protein n=1 Tax=Timema poppense TaxID=170557 RepID=A0A7R9DS79_TIMPO)

HSP 1 Score: 81.6 bits (200), Expect = 4.130e-17
Identity = 36/86 (41.86%), Postives = 54/86 (62.79%), Query Frame = 1

Query:  133 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWL 390
            W    +V+L DCL AFFS + L+G N Y C+ C   +   K + +L  PE+L +H+KRFR   ++S K++N V FPL +LD+  +L
Sbjct:   29 WFWGPTVSLHDCLAAFFSADELKGDNMYSCEKCNKLRNGVKYSKVLELPEVLCIHLKRFRHELMFSSKINNYVSFPLEELDMRPYL 114

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BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match: A0A1I8AR30_9BILA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I8AR30_9BILA)

HSP 1 Score: 86.3 bits (212), Expect = 1.130e-16
Identity = 37/90 (41.11%), Postives = 58/90 (64.44%), Query Frame = 1

Query:  148 SVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDHALESSV 417
            +++L+DCL AFFSP+ L+G + Y C+ C   +   K+  +   PEIL +H+KRFR  Y++S KV   V FP+ D+D+S +L D+   S +
Sbjct:  441 AISLDDCLKAFFSPDHLKGEDMYSCEKCAKLRNGVKTCRITKLPEILCIHLKRFRHDYMYSTKVSTSVTFPICDMDLSEFLCDNVQPSDM 530

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BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match: A0A267GT82_9PLAT (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GT82_9PLAT)

HSP 1 Score: 84.7 bits (208), Expect = 3.880e-16
Identity = 36/80 (45.00%), Postives = 54/80 (67.50%), Query Frame = 1

Query:  151 VALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWL 390
            V+L+DCLDAFFS + L+G N YHC  CG  +   K + +   PE+L +H+KRFR  + +S K+H+ V FP+ +LD+  +L
Sbjct:  452 VSLQDCLDAFFSNDDLKGDNMYHCAKCGKLRNGIKYSRISRLPEMLTVHLKRFRHDFAYSSKIHSHVAFPVDELDMKPYL 531

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BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match: A0A293LI95_ORNER (Ubiquitinyl hydrolase 1 (Fragment) n=2 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LI95_ORNER)

HSP 1 Score: 84.3 bits (207), Expect = 3.940e-16
Identity = 38/86 (44.19%), Postives = 55/86 (63.95%), Query Frame = 1

Query:  133 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWL 390
            WL   +++L+DCL AFFS + L+G N Y CD C   +   K + +L  PE+L +H+KRFR   ++S K+ N V FPL  LD+S +L
Sbjct:    8 WLWGPTISLQDCLSAFFSADELKGDNMYSCDKCHKLRNGVKFSKVLQLPEVLCVHLKRFRHEVMFSSKISNYVSFPLEGLDMSPFL 93

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BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match: A0A4U5NEF0_STECR (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5NEF0_STECR)

HSP 1 Score: 84.3 bits (207), Expect = 5.180e-16
Identity = 36/85 (42.35%), Postives = 56/85 (65.88%), Query Frame = 1

Query:  145 KSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWLSDH 399
             +++L+DCL +FFSP+ LRG + Y C+ C   +   K+  +   PEIL +H+KRFR  Y++S KV   V FP+ DLD+S +L ++
Sbjct:  308 SAISLDDCLKSFFSPDHLRGDDMYSCEKCAKLRNGVKTCRITKLPEILCIHLKRFRHDYVYSTKVSTSVTFPICDLDLSEFLCEN 392

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BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Match: A0A5N5SYD6_9CRUS (Ubiquitinyl hydrolase 1 n=1 Tax=Armadillidium nasatum TaxID=96803 RepID=A0A5N5SYD6_9CRUS)

HSP 1 Score: 84.3 bits (207), Expect = 5.230e-16
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 1

Query:  133 WLGFKSVALEDCLDAFFSPERLRGANQYHCDGCGCKKEADKSTSLLHAPEILMLHVKRFRRGYLWSHKVHNRVVFPLHDLDVSRWL 390
            WL   SV+L +CL AFFS + L+G N Y C+ CG  +   K + ++  PEIL++H+KRFR  Y++S K+   V FP+  LD+S +L
Sbjct:  299 WLWGPSVSLFNCLAAFFSADELKGDNMYSCEKCGKLRNGVKYSKVIELPEILIIHLKRFRHEYMYSSKISQYVAFPVQGLDLSPFL 384

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig10718.513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
D8LS72_ECTSI	3.200e-91	97.50	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto...	[more]
A0A6H5JK59_9PHAE	9.640e-88	91.88	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
UPI000F67000D	3.180e-17	44.19	ubiquitin carboxyl-terminal hydrolase 20-like n=1 ...	[more]
UPI001C70FF2F	3.350e-17	44.19	ubiquitin carboxyl-terminal hydrolase 20-like isof...	[more]
A0A7R9DS79_TIMPO	4.130e-17	41.86	Hypothetical protein n=1 Tax=Timema poppense TaxID...	[more]
A0A1I8AR30_9BILA	1.130e-16	41.11	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Stei...	[more]
A0A267GT82_9PLAT	3.880e-16	45.00	Ubiquitin carboxyl-terminal hydrolase (Fragment) n...	[more]
A0A293LI95_ORNER	3.940e-16	44.19	Ubiquitinyl hydrolase 1 (Fragment) n=2 Tax=Ornitho...	[more]
A0A4U5NEF0_STECR	5.180e-16	42.35	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Stei...	[more]
A0A5N5SYD6_9CRUS	5.230e-16	44.19	Ubiquitinyl hydrolase 1 n=1 Tax=Armadillidium nasa...	[more]

Pages

Properties


Property Name	Value
Start	0
Stop	0
Cds size	474
Model size	475
Exons	4
Hectar predicted targeting category	other localisation
BRITE	ko00000,ko00001,ko01000,ko01002,ko04121,ko04131
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	O
EC	3.4.19.12
EggNOG OGs	COG5077@1,COG5560@1,KOG1870@2759,KOG4598@2759
EggNOG free text desc.	thiol-dependent ubiquitin-specific protease activity
GOs	GO:0003674,GO:0003824,GO:0004843,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006464,GO:0006508,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016569,GO:0016570,GO:0016578,GO:0016579,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0019783,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0036211,GO:0036459,GO:0040029,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0060255,GO:0065007,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0080090,GO:0099114,GO:0101005,GO:0140096,GO:1901564,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
KEGG Pathway	ko04137,map04137
KEGG ko	ko:K11848,ko:K11851,ko:K11857,ko:K11873
Seed eggNOG ortholog	2880.D8LS72
Seed ortholog evalue	5.3e-78
Seed ortholog score	297.0
Taxonomic scope	Eukaryota