prot_E-siliculosus-1a_F_contig107.506.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig107.506.1
Unique Nameprot_E-siliculosus-1a_F_contig107.506.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length275
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig107.506.1 vs. uniprot
Match: D7FJ07_ECTSI (Similar to LPS-responsive vesicle trafficking, beach and anchor containing isoform 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ07_ECTSI)

HSP 1 Score: 513 bits (1320), Expect = 1.630e-165
Identity = 270/286 (94.41%), Postives = 270/286 (94.41%), Query Frame = 0
Query:    1 ILSCGYWDNGVRLHRVNSAGKLSLDGSETGGHYGAITCLAIAQESSLLVTGGQDATCRVWVVGNAPMASALGGTSACGVIPKKGTSSKNSMVCVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRC------------ASIPEASQLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATAAAPTTINCLLTAGGGEYLLAGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMSPXXXXXXXXXXXXEVSIITDARKRMRMLDLALRRAFVG 274
            ILSCGYWDNGVRLHRVNS GKL LDGSETGGHYGAITCLAIAQESSLLVTGGQDATCRVWVVGNAPMASALGGTSACGVIPKKGTSSKNSMVCVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRC            AS PEASQLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATA APTTINCLLTAGGGEYLLAGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMSPXXXXXXXXXXXXEVSIITDARKRMRMLDLALRRAFVG
Sbjct: 1639 ILSCGYWDNGVRLHRVNSGGKLPLDGSETGGHYGAITCLAIAQESSLLVTGGQDATCRVWVVGNAPMASALGGTSACGVIPKKGTSSKNSMVCVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRCGTGSATATDAAEASTPEASQLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATAVAPTTINCLLTAGGGEYLLAGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMSPXXXXXXXXXXXXEVSIITDARKRMRMLDLALRRAFVG 1924          
BLAST of mRNA_E-siliculosus-1a_F_contig107.506.1 vs. uniprot
Match: A0A6H5KYR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYR7_9PHAE)

HSP 1 Score: 504 bits (1299), Expect = 6.790e-161
Identity = 263/286 (91.96%), Postives = 266/286 (93.01%), Query Frame = 0
Query:    1 ILSCGYWDNGVRLHRVNSAGKLSLDGSETGGHYGAITCLAIAQESSLLVTGGQDATCRVWVVGNAPMASALGGTSACGVIPKKGTSSKNSMVCVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRC------------ASIPEASQLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATAAAPTTINCLLTAGGGEYLLAGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMSPXXXXXXXXXXXXEVSIITDARKRMRMLDLALRRAFVG 274
            +LSCGYWDNGVRLHRVNSAGKL LDGSETGGH GAITCLAIAQESSLLVTGG+DATCRVWVVGNAPMASALGG SACGVIPKKGTSSKNSMVCVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRC            ASIPEASQLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATA APTTINCLLTAGGG YLLAGGQDG+IRVHTLHDLCVLHTIDLQQHGGVTCMRMSP   XXXXXXXXXEVSIITDARKRMRMLDLALRRAFVG
Sbjct: 2285 LLSCGYWDNGVRLHRVNSAGKLPLDGSETGGHCGAITCLAIAQESSLLVTGGRDATCRVWVVGNAPMASALGGASACGVIPKKGTSSKNSMVCVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRCGTGSPTATDAAEASIPEASQLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATAVAPTTINCLLTAGGGGYLLAGGQDGVIRVHTLHDLCVLHTIDLQQHGGVTCMRMSPDHEXXXXXXXXXEVSIITDARKRMRMLDLALRRAFVG 2570          
BLAST of mRNA_E-siliculosus-1a_F_contig107.506.1 vs. uniprot
Match: B7GC44_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GC44_PHATC)

HSP 1 Score: 177 bits (450), Expect = 6.300e-50
Identity = 96/240 (40.00%), Postives = 149/240 (62.08%), Query Frame = 0
Query:    1 ILSCGYWDNGVRLHRVNSAGKLSLDGSETGGHYGAITCLAIAQESSLLVTGGQDATCRVWVVGNAPMASALGGTSACGVIPKKGTSSKNSMVCVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRC----ASIPEASQLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATAAAPTTINCLLTAGGGEYLLAGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMS 236
            ++SCGYWD+GVR+H +++   L +  +E GGH G I CLA+AQ+ +L+VTGG+D TCRVWVV ++ +A AL        +    T  ++ + C HVL+GHE PITC+A+   LD V+SG+ +G+I +H L+ G +VR +       + P  +++A    G VVVH+  D+SLH +S+NG RLA+  A   +  L      E+++ GG  G + V +L DL +   +DL +HG V C+ ++
Sbjct:  102 LVSCGYWDHGVRVHGLDN--NLRVLATEAGGHRGPILCLAVAQDDALMVTGGEDCTCRVWVVDHSDLAVALSDGYVQTALGSANTG-ESVLSCCHVLWGHETPITCVALDSSLDVVISGSREGKICVHTLRRGEFVRFFTPPVSGGTPPAIARVALHPTGTVVVHA-RDQSLHAFSVNGVRLASVNAGEELYDLQFC--NEFVVTGGTRGQVCVRSLSDLQIQSVVDLSRHGPVHCLALT 335          
BLAST of mRNA_E-siliculosus-1a_F_contig107.506.1 vs. uniprot
Match: A0A6U2E064_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A6U2E064_9STRA)

HSP 1 Score: 175 bits (444), Expect = 8.030e-50
Identity = 102/263 (38.78%), Postives = 144/263 (54.75%), Query Frame = 0
Query:    1 ILSCGYWDNGVRLHRVNSAGKLSLDGSETGGHYGAITCLAIAQESSLLVTGGQDATCRVWVVGNAPMA---------SALGGTSACGVIPKKGTSSKNSMVCVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRCA-------SIPEASQ----------LAFSRHGDVVVHSWTDRSLHRYSLNGTRLATAAAPTTINCLLTAGGGEYLLAGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMSP 237
            +LSCGYWDN ++ H V     L L  S  GGH GAI CL+I  E  L+VTGGQDATCRVW V    MA         +ALGG ++        +S + ++ C H+L+GH+APITCL+ S DLD VVSG+ DG + +H ++ G +VR+   +       S PE +           LA + HG  V H   D  L  Y++N  +L  A A   +N +    GGE L+ GG+   + + T+ DL V   +DL  HG + C++++P
Sbjct:   20 LLSCGYWDNTIKAHSVEG---LKLKCSGHGGHRGAINCLSIGDEGGLMVTGGQDATCRVWTVDWHDMAIALTDGYVQTALGGNAS-------SSSKERTLNCCHILWGHDAPITCLSFSSDLDAVVSGSVDGIVCVHTVRRGKFVRKIDTSKFFPDGGSSPEGTNSSNQKKLVRTLALNDHGTFVAHLENDM-LQSYTINAVKLCCADAGEKLNAMEMCSGGEMLVTGGESCHVVIRTVGDLIVRCVLDLSSHGPIRCIKLTP 271          
BLAST of mRNA_E-siliculosus-1a_F_contig107.506.1 vs. uniprot
Match: A0A7S2A7N3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7N3_TRICV)

HSP 1 Score: 174 bits (441), Expect = 1.630e-49
Identity = 101/250 (40.40%), Postives = 144/250 (57.60%), Query Frame = 0
Query:    4 CGYWDNGVRLHRVNSAGKLSLDGSETGGHYGAITCLAIAQESSLLVTGGQDATCRVWVVGNAPMASALGGTSACGVIPKKGTSSKNSMV-CVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRC----ASIPEAS-----------QLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATAAAPTTINCLLTAGGGEYLLAGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMSP 237
            CGYWD+ V+ H V+S   L L  SE GGH GA+ CL+I  +  L+VTGGQDATCRVWV+ +  M+ AL   +   V    GT+ ++S++ C HVL+GH AP+TCL+ S DLD VVSGA DG I +H ++ G ++R+       + +  AS           +LA + HG  V H   D  L  Y++NG +L  A A   +N +     GE L+ GG+   + + TL DL V   +DL  HG + C+ ++P
Sbjct:    1 CGYWDDTVKSHSVDS---LRLKCSENGGHRGAVNCLSIGSDGGLMVTGGQDATCRVWVIDHNDMSIAL---TDGYVQTALGTNDEDSILNCCHVLWGHSAPVTCLSFSSDLDVVVSGAMDGVICVHTVRQGKFIRKIHTGKFFSDVDSASTSSREKEVFVKKLALNDHGRFVAHL-EDGMLQSYTINGVKLGCADAGEKLNAMEICSDGEMLVTGGESCHVVIRTLSDLIVRCVLDLSTHGPIRCISITP 243          
BLAST of mRNA_E-siliculosus-1a_F_contig107.506.1 vs. uniprot
Match: A0A7S3PDC4_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PDC4_9STRA)

HSP 1 Score: 184 bits (467), Expect = 4.010e-49
Identity = 102/243 (41.98%), Postives = 148/243 (60.91%), Query Frame = 0
Query:    1 ILSCGYWDNGVRLHRVNSAGKLSLDGSETGGHYGAITCLAIAQESSLLVTGGQDATCRVWVVGNAPMASALGGTSACGVIPKKGTSSKNSMV--CVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRCASI----PEASQLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATAAAPTTINCLLTAGGGEYLLAGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMSP 237
            ++SCGY+D+ V++H   S   L L  SE GGH G I CL+IA +  L+VTGGQDATCRVWVV +A MA AL   S   V    G S+    +  C HVL+GH+ P+TC+ ++ DLD +VSG+ DG + +H ++ G ++R +R  SI    P  +++A    G++VVH  +D  L+ Y++NG  LA   A   I+ +     GEY++ GG D  +R+ TL DL V   +DL  HG + C+ M+P
Sbjct: 1138 LVSCGYFDDTVKIHGTES---LDLVASENGGHRGPIRCLSIASDG-LMVTGGQDATCRVWVVNHADMAVAL---SDGYVQTALGASNDGEQLLSCCHVLWGHDTPLTCVDINSDLDVIVSGSEDGLVCVHNIRRGEFIRAFRPPSIGHCKPSVARIALDATGNMVVHM-SDGGLYSYTVNGVELAAINAGEIIHDMKICSDGEYIVTGGDDCQVRIRTLSDLTVRAVLDLTSHGPIRCIAMTP 1372          
BLAST of mRNA_E-siliculosus-1a_F_contig107.506.1 vs. uniprot
Match: A0A7S1UNE3_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNE3_9STRA)

HSP 1 Score: 177 bits (448), Expect = 1.300e-46
Identity = 97/244 (39.75%), Postives = 143/244 (58.61%), Query Frame = 0
Query:    1 ILSCGYWDNGVRLHRVNSAGKLSLDGSETGGHYGAITCLAIAQESSLLVTGGQDATCRVWVVGNAPMASALGG---TSACGVIPKKGTSSKNSMVCVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYR----CASIPEASQLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATAAAPTTINCLLTAGGGEYLLAGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMSP 237
            I+SCGYWD+ V++H V+    L L  S+TGGH G + CLA+  + +L+VTGG DATCRVWVV +  MA AL      +A G    +    +  ++C H+L+GH APITC+++S DLD VVSG+ DG + +H ++ G YVR  R      +I  A ++     GD  V +  D +LH Y++N   LA+  A   +N +L    G  L+ GG+ G I   ++ DL VL  +DL + G + C+  +P
Sbjct:  805 IVSCGYWDDTVKVHSVDG---LKLTCSDTGGHRGPVRCLALGDDGALMVTGGNDATCRVWVVDHPDMAVALSDGYVKTALG----EALDREKQLICCHILWGHVAPITCVSLSSDLDVVVSGSLDGAVCVHTVRRGTYVRTIRPLNRTNAINAARKITLHGTGDFCV-AMEDHTLHSYTVNDVHLASTDAGEALNDMLITSFGSVLVTGGELGWIVCRSVRDLLVLSVLDLSRQGPIRCLSTTP 1040          
BLAST of mRNA_E-siliculosus-1a_F_contig107.506.1 vs. uniprot
Match: A0A7S2SAH4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SAH4_9STRA)

HSP 1 Score: 168 bits (425), Expect = 6.090e-46
Identity = 98/250 (39.20%), Postives = 144/250 (57.60%), Query Frame = 0
Query:    1 ILSCGYWDNGVRLHRVNSAGKLSLDGSETGGHYGAITCLAIAQESSLLVTGGQDATCRVWVVGNAPMASALGGTSACGVIPKKGTSSKNSMV-CVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQ---YRCASIPEA---------SQLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATAAAPTTINCLLTAGGGEYLLAGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMSP 237
             LSCGY+DN V+LH  +    L L  +E GGH GAI CL+I  +  L+VTGGQDATCRVW++ +A MA+AL        + KK   +K S++ C  VL+GHEA ++CL+ S DLD VVSG+ +G I +H  + G ++R    +    I +A          +LA + HG  V H   + SL  Y++NG +L  A A   +N +    GG+ L+ GG+   + + TL DL V   +DL++ G + C+  +P
Sbjct:  104 FLSCGYYDNTVKLHTFDG---LRLKCAENGGHRGAINCLSIGDDGGLMVTGGQDATCRVWIIDHADMATALTDGYVQTALGKKDNDAKESILNCCQVLWGHEAAVSCLSFSSDLDIVVSGSVNGVICVHTARRGSFIRSIWVHDFLKIAKAYGNNKGTAIRKLALNDHGTFVAHL-ENYSLLMYTVNGVKLGLADAGEKLNAMEIVPGGDLLVTGGERCQVVIRTLRDLGVRCIVDLKKQGPIRCISCTP 349          
BLAST of mRNA_E-siliculosus-1a_F_contig107.506.1 vs. uniprot
Match: A0A7S4NG05_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NG05_9STRA)

HSP 1 Score: 173 bits (439), Expect = 2.370e-45
Identity = 97/252 (38.49%), Postives = 140/252 (55.56%), Query Frame = 0
Query:    1 ILSCGYWDNGVRLHRVNSAGKLSLDGSETGGHYGAITCLAIAQESSLLVTGGQDATCRVWVVGNAPMASALGGTSACGVIPKKGTSSKN-SMVCVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRCASI--------PEAS------QLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATAAAPTTINCLLTAGGGEYLLAGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMSP 237
            +LSCGYWDN ++ H V     L L  SE+GGH GAI C+++  E  L++TGG DATCRVW V    MA AL        +   G  SK  ++ C H+L+GH++PITCL+ S DLD VVSGA +G + +H ++ G +VR+   +          P  S      +LA + HG  V H   D  L  Y++N  +L  A A   +N +    GGE L+ GG+   + + T+ DL V   +DL  HG + C++++P
Sbjct: 2025 LLSCGYWDNAIKAHTVEG---LKLKCSESGGHSGAINCMSVGDEGGLMITGGHDATCRVWTVDWHDMAIALTDGYVQTALGANGRGSKEKNLNCCHILWGHDSPITCLSFSSDLDIVVSGAVNGIVCVHSVRRGKFVRKIDTSDFFLGNSSANPGRSHKTIVRKLALNDHGTFVAHL-EDGMLQCYTINSVKLCCADAGEKLNAMEICSGGEMLVTGGESCHVVIRTVGDLMVRCVLDLSSHGPIRCIKLTP 2272          
BLAST of mRNA_E-siliculosus-1a_F_contig107.506.1 vs. uniprot
Match: A0A7S1D922_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D922_CYCTE)

HSP 1 Score: 164 bits (415), Expect = 2.430e-45
Identity = 89/246 (36.18%), Postives = 137/246 (55.69%), Query Frame = 0
Query:    1 ILSCGYWDNGVRLHRVNSAGKLSLDGSETGGHYGAITCLAIAQESSLLVTGGQDATCRVWVVGNAPMASALGGTSACGVIPKKGTSSKNSMVCVHVLYGHEAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRCA---------SIPEASQLAFSRHGDVVVHSWTDRSLHRYSLNGTRLATAAAPTTINCLLTAGGGEYLLAGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMSP 237
            ++SCGYWD+ V++H ++ +  L    S +GGH G I CL++    +L+VTGGQDATCRVWV+ +  MA AL        + +     +  + C HVL+GHE+P++ + +S DLD VVSG+ DG + +H  + G ++R  R           S P   ++A    G  VVH   D SLH  ++NG  L +  A  T+N +     GE L+ GG    + V T+ DL V   +D+ +HG + C+ ++P
Sbjct:   39 LVSCGYWDDTVKIHSIDGSRILC---SHSGGHRGPIRCLSVGSCGALMVTGGQDATCRVWVIYHPDMAVALSDGYVQTALGES-NDGEQRLTCCHVLWGHESPVSSVDLSSDLDVVVSGSLDGIVCVHSARRGKFIRSMRPRKPGHKRANLSSPAVRKIALDSSGIFVVHL-DDGSLHSCTINGANLCSVNAQETLNAMRITSNGEMLVTGGDKCQVVVRTVKDLRVCSMLDITRHGPIRCIALTP 279          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig107.506.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ07_ECTSI1.630e-16594.41Similar to LPS-responsive vesicle trafficking, bea... [more]
A0A6H5KYR7_9PHAE6.790e-16191.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
B7GC44_PHATC6.300e-5040.00Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A6U2E064_9STRA8.030e-5038.78Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2A7N3_TRICV1.630e-4940.40Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S3PDC4_9STRA4.010e-4941.98Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S1UNE3_9STRA1.300e-4639.75Hypothetical protein n=2 Tax=Grammatophora oceanic... [more]
A0A7S2SAH4_9STRA6.090e-4639.20Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S4NG05_9STRA2.370e-4538.49Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1D922_CYCTE2.430e-4536.18Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 215..255
e-value: 0.023
score: 23.9
coord: 174..212
e-value: 3.6
score: 13.5
coord: 21..61
e-value: 0.0022
score: 27.3
coord: 90..129
e-value: 2.4E-6
score: 37.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 92..126
e-value: 2.0E-5
score: 25.2
coord: 224..253
e-value: 5.7E-4
score: 20.6
coord: 30..60
e-value: 3.3E-5
score: 24.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 97..127
score: 9.038
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 29..60
score: 11.979
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..68
e-value: 6.1E-8
score: 34.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 79..267
e-value: 6.3E-25
score: 89.7
NoneNo IPR availablePANTHERPTHR13743:SF132BEACH DOMAIN-CONTAINING PROTEIN LVSCcoord: 1..257
NoneNo IPR availablePANTHERPTHR13743BEIGE/BEACH-RELATEDcoord: 1..257
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..264
score: 11.418
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 3..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig107contigE-siliculosus-1a_F_contig107:82579..83701 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig107.506.1mRNA_E-siliculosus-1a_F_contig107.506.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig107 82579..83701 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig107.506.1 ID=prot_E-siliculosus-1a_F_contig107.506.1|Name=mRNA_E-siliculosus-1a_F_contig107.506.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=275bp
ILSCGYWDNGVRLHRVNSAGKLSLDGSETGGHYGAITCLAIAQESSLLVT
GGQDATCRVWVVGNAPMASALGGTSACGVIPKKGTSSKNSMVCVHVLYGH
EAPITCLAVSEDLDTVVSGASDGRIVLHCLKNGCYVRQYRCASIPEASQL
AFSRHGDVVVHSWTDRSLHRYSLNGTRLATAAAPTTINCLLTAGGGEYLL
AGGQDGLIRVHTLHDLCVLHTIDLQQHGGVTCMRMSPDHEYLLAGSQDGE
VSIITDARKRMRMLDLALRRAFVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat