prot_E-siliculosus-1a_F_contig107.503.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig107.503.1
Unique Nameprot_E-siliculosus-1a_F_contig107.503.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length540
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match: D7FJ04_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ04_ECTSI)

HSP 1 Score: 775 bits (2002), Expect = 1.170e-279
Identity = 418/452 (92.48%), Postives = 421/452 (93.14%), Query Frame = 0
Query:   56 MVLGHHIEPVVSLLLAADNDPSLRCGSSLGQTQRQLCERAHITLGDLAQQAPDVIGAASDLADSAQASVGESLGAIGNVWDSIVDTVTSAKDQATDTTLGSVDALKSQVDELSANALSPFQRLGEDISNSLSGQLDSLKIGAQGAVGEAQTQFGQSVAENIGNPVQEGLGQVFSKFGTSPEELLKEEQTLTNGVQQAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIMQQQPAKPSPKTSPSGTPSSTLGREAKELITKATREAEEILQQARSTGAAQAASLLEEAETEALLILKGAEVEKEALLLRANKTEPNTEAETGPAGSEAK 507
            MVLGHHIEPVVSLLLAADNDPSL                   TLGDLAQQAPDVIGAASDLADSAQASVGESLGAIGNVWDSIVDTVTSAKDQATDTTLGSVDALK QVDELSANALSPFQRLGEDISNSLSGQLDSLKIGAQGAVGEAQTQFGQSVAENIGNPVQEG+GQVFSKFGTSPEELLKEEQTLTNGVQQAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNL GLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIMQQQP +PSPKT  SGTPSSTL REAKELITKA RE    LQQARSTGAAQAASLLEEAETEALLILKGAEVEKEALLLRANKTEP+TEAET PAGSEAK
Sbjct:    1 MVLGHHIEPVVSLLLAADNDPSLS------------------TLGDLAQQAPDVIGAASDLADSAQASVGESLGAIGNVWDSIVDTVTSAKDQATDTTLGSVDALKYQVDELSANALSPFQRLGEDISNSLSGQLDSLKIGAQGAVGEAQTQFGQSVAENIGNPVQEGMGQVFSKFGTSPEELLKEEQTLTNGVQQAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLGGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIMQQQPTEPSPKTPSSGTPSSTLRREAKELITKAKREXXXXLQQARSTGAAQAASLLEEAETEALLILKGAEVEKEALLLRANKTEPSTEAETRPAGSEAK 434          
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match: A0A835YXE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE1_9STRA)

HSP 1 Score: 198 bits (503), Expect = 6.820e-54
Identity = 88/160 (55.00%), Postives = 113/160 (70.62%), Query Frame = 0
Query:  249 VQQAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIM 408
            +Q  +   E+VA P   F AEN  +LPLW GM+  P     +KIM  Y  ++LAAL+Y WLTYE  QNPVSL GF+ G  +L+ LTKGF +EVSVA  W+HF+A+DLF+GRWVYLD +RN ++  HSL LCYLFGP G LSHLLTRG++ + +  V DI+
Sbjct:  151 LQHIVTIAEKVATPKRTFLAENILVLPLWGGMIFAPNNKYVQKIMEGYSVIILAALVYAWLTYEALQNPVSLAGFSGGAFDLDTLTKGFTQEVSVADGWAHFIAQDLFVGRWVYLDSKRNSVWAAHSLALCYLFGPIGVLSHLLTRGLSGIFRQDVTDIL 310          
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match: A0A7S3Y5E5_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E5_HETAK)

HSP 1 Score: 184 bits (466), Expect = 6.490e-48
Identity = 84/169 (49.70%), Postives = 117/169 (69.23%), Query Frame = 0
Query:  256 VERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIMQQQPAKPSPKTSPSGT 424
            +E    P+T+F  +N A LPLW+ M+ +P+  +TK +M SY P+   +++Y+W  Y  FQ+P +LQGF+  IT+L  LTKGFG EV+VATAW+HF+A+DLF+GR++YLDG +N +FT+HS+ L YLFGPAG LSHL+TRG   ++ PG   I     A   PK  P  T
Sbjct:  280 LETKLTPNTVFTIDNVASLPLWLAMIGFPQNGVTKGLMKSYLPISAFSMLYVWSAYLAFQDPQALQGFSEAITSLPALTKGFGSEVAVATAWAHFIAQDLFVGRFIYLDGLKNGVFTRHSVALAYLFGPAGLLSHLVTRGFVGLLNPGQDIIEAGMSASTIPKPMPQPT 448          
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match: W7U388_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U388_9STRA)

HSP 1 Score: 178 bits (452), Expect = 7.280e-46
Identity = 100/245 (40.82%), Postives = 142/245 (57.96%), Query Frame = 0
Query:  178 LGEDISNSLSGQLDSLKIGAQGAVGEAQTQFGQSVAENIGN---PVQEGLGQ----------VFSKFGT-SPEELLKEEQTLTNGVQQAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIM 408
            LG +I   LS    +LK      VG   +  G +  E  G+   P Q  L Q          V S+F   + +EL K+ +TL+     A++ ++ V  P  LF AEN  ILP W  +++ P     K +++SY P+++AAL Y W  Y  FQ+P +L+GFAS I++L  L+KG G E   ATAW+HF+A+DLF+GRW++LDG RN ++T HSL L +LFGP G LSHLLTR    + +  + DIM
Sbjct:  184 LGAEIKTELS----ALKSQVGEIVGSRLSGLGSAFTEKAGDVLIPYQPFLEQTKRQLGDKFSVVSQFAEQATQELSKDAETLS----PALRALKTVGTPRNLFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFAS-ISDLSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLTRSFVKIFRWDIADIM 419          
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match: A0A7S0KR27_MICPS (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0KR27_MICPS)

HSP 1 Score: 164 bits (416), Expect = 6.370e-44
Identity = 68/147 (46.26%), Postives = 101/147 (68.71%), Query Frame = 0
Query:  255 GVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVK 401
            G+E +  P T+F  ENAAI P W+GM+ +P+  +T+ +M SY   +L   +Y++LTY  F +P  ++ F++G  +L  L+KGF  E  +A  W+HF+A DLF+GRW+YLD ++N +F  HSL+LC  FGP G +SH LTRGVTS+ +
Sbjct:   55 GLEWIPTPETVFDVENAAIFPFWLGMIAFPKNKVTETVMGSYAVPILLGFVYIYLTYYSFSDPRIIEAFSTGKPDLAALSKGFSYEWCMAVGWAHFIAMDLFVGRWIYLDARKNDVFAAHSLLLCLFFGPTGVISHTLTRGVTSLAR 201          
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match: A0A7S3Y5F1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5F1_HETAK)

HSP 1 Score: 162 bits (411), Expect = 1.690e-43
Identity = 74/145 (51.03%), Postives = 102/145 (70.34%), Query Frame = 0
Query:  280 MVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIMQQQPAKPSPKTSPSGT 424
            M+ +P+  +TK +M SY P+   +++Y+W  Y  FQ+P +LQGF+  IT+L  LTKGFG EV+VATAW+HF+A+DLF+GR++YLDG +N +FT+HS+ L YLFGPAG LSHL+TRG   ++ PG   I     A   PK  P  T
Sbjct:    1 MIGFPQNGVTKGLMKSYLPISAFSMLYVWSAYLAFQDPQALQGFSEAITSLPALTKGFGSEVAVATAWAHFIAQDLFVGRFIYLDGLKNGVFTRHSVALAYLFGPAGLLSHLVTRGFVGLLNPGQDIIEAGMSASTIPKPMPQPT 145          
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match: C1N0R2_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N0R2_MICPC)

HSP 1 Score: 140 bits (352), Expect = 7.200e-36
Identity = 60/134 (44.78%), Postives = 87/134 (64.93%), Query Frame = 0
Query:  264 TLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVT 397
            T+F  EN AI PLW+GM+  P+  +T+ +M+S     +   +Y++LT+  F +P  L  F++G  +L  L KGF  E  VA  W+HF+A DLF GRW+YLD ++N +F  HSL+LC  FGP G +SH+ TR +T
Sbjct:    2 TVFNVENVAIFPLWLGMIFAPKSGVTRAVMDSALVPCVCGFVYVYLTWYSFHDPRILDAFSTGKPDLAALAKGFSYEWCVAVGWAHFIAMDLFAGRWIYLDARKNDVFAAHSLLLCLFFGPTGAISHVTTRAIT 135          
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match: A0A0G4GWJ9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GWJ9_VITBC)

HSP 1 Score: 140 bits (354), Expect = 1.230e-34
Identity = 64/135 (47.41%), Postives = 86/135 (63.70%), Query Frame = 0
Query:  262 PSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGV 396
            PS +F A NA +LP W  MV+ P   +T+K+M S  P ++  L+Y+WL       P +++G   G   L  LTK F  E  VAT W HFLAEDLF+GRWVYLDG++N +  +HS +L  LFGP G +SHL+TR +
Sbjct:   97 PSAVFTASNAFVLPFWALMVIAPGAQVTEKLMRSVTPFIVLGLLYLWLAVISSTFPEAVEGLGQGAGQLPVLTKAFSLEPVVATGWVHFLAEDLFVGRWVYLDGRKNDVPIRHSCLLSLLFGPLGVVSHLVTRDI 231          
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match: UPI001F29C295 (DUF4281 domain-containing protein n=1 Tax=Tychonema sp. BBK16 TaxID=2699888 RepID=UPI001F29C295)

HSP 1 Score: 125 bits (315), Expect = 2.020e-30
Identity = 60/138 (43.48%), Postives = 87/138 (63.04%), Query Frame = 0
Query:  262 PSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITN--LEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVT 397
            P  +F   N  +LP W  M++ P   +T+K+MNS+ P VL AL+Y++L    F + ++ +  A+ ++N  L  + K  GEE + AT W HFL  DLF+GRW+YL+GQR  ++T HSL LC   GP G LSH+LT  +T
Sbjct:    3 PELIFTVGNLFVLPFWAIMILLPNWGITRKVMNSFIPFVLLALMYIYL----FASSITPEN-AAALSNPKLADIAKFLGEETAAATGWIHFLVMDLFVGRWIYLEGQRTGVWTIHSLALCLFAGPIGLLSHILTHWIT 135          
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match: UPI0018812FA2 (ABA4-like family protein n=4 Tax=Microcoleaceae TaxID=1892252 RepID=UPI0018812FA2)

HSP 1 Score: 125 bits (313), Expect = 4.460e-30
Identity = 59/139 (42.45%), Postives = 89/139 (64.03%), Query Frame = 0
Query:  262 PSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITN--LEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTS 398
            P  +F A N  +LP W  M++ P   +T+K+MNS+ P V+ AL+Y++L    F + ++ +  A+ ++N  L  + K  GEE + AT W HFL  DLF+GRW+YL+GQR  ++T HSL LC   GP G LSH++T  +T+
Sbjct:    3 PELIFDAGNLFVLPFWAIMILLPNWGITRKVMNSFIPFVVLALLYIYL----FGSSLTAEN-AAALSNPKLADIAKFLGEETAAATGWIHFLVMDLFVGRWIYLEGQRTGVWTVHSLALCLFAGPMGLLSHIVTAWITA 136          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ04_ECTSI1.170e-27992.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YXE1_9STRA6.820e-5455.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Y5E5_HETAK6.490e-4849.70Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
W7U388_9STRA7.280e-4640.82Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S0KR27_MICPS6.370e-4446.26Hypothetical protein n=2 Tax=Micromonas TaxID=3883... [more]
A0A7S3Y5F1_HETAK1.690e-4351.03Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
C1N0R2_MICPC7.200e-3644.78Predicted protein (Fragment) n=1 Tax=Micromonas pu... [more]
A0A0G4GWJ9_VITBC1.230e-3447.41Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
UPI001F29C2952.020e-3043.48DUF4281 domain-containing protein n=1 Tax=Tychonem... [more]
UPI0018812FA24.460e-3042.45ABA4-like family protein n=4 Tax=Microcoleaceae Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 430..450
NoneNo IPR availablePANTHERPTHR34543FAMILY NOT NAMEDcoord: 262..401
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 312..539
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 265..283
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 284..294
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..264
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 295..311
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
IPR025461ABA DEFICIENT 4-likePFAMPF14108DUF4281coord: 264..390
e-value: 2.1E-36
score: 125.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig107contigE-siliculosus-1a_F_contig107:64959..69778 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig107.503.1mRNA_E-siliculosus-1a_F_contig107.503.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig107 64482..69778 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig107.503.1 ID=prot_E-siliculosus-1a_F_contig107.503.1|Name=mRNA_E-siliculosus-1a_F_contig107.503.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=540bp
MTGSSTLFVVSSVAILARDCNSLLVHPHLSDSRLSTSAATSYSSSSSSSG
TRPLRMVLGHHIEPVVSLLLAADNDPSLRCGSSLGQTQRQLCERAHITLG
DLAQQAPDVIGAASDLADSAQASVGESLGAIGNVWDSIVDTVTSAKDQAT
DTTLGSVDALKSQVDELSANALSPFQRLGEDISNSLSGQLDSLKIGAQGA
VGEAQTQFGQSVAENIGNPVQEGLGQVFSKFGTSPEELLKEEQTLTNGVQ
QAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLV
LAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHF
LAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVV
KPGVRDIMQQQPAKPSPKTSPSGTPSSTLGREAKELITKATREAEEILQQ
ARSTGAAQAASLLEEAETEALLILKGAEVEKEALLLRANKTEPNTEAETG
PAGSEAKVGSEAKAGSEAKAGSEAKAGSEAKTASAKIEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025461ABA4-like