Homology
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match:
D7FJ04_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ04_ECTSI)
HSP 1 Score: 775 bits (2002), Expect = 4.730e-277
Identity = 418/452 (92.48%), Postives = 421/452 (93.14%), Query Frame = 1
Query: 166 MVLGHHIEPVVSLLLAADNDPSLRCGSSLGQTQRQLCERAHITLGDLAQQAPDVIGAASDLADSAQASVGESLGAIGNVWDSIVDTVTSAKDQATDTTLGSVDALKSQVDELSANALSPFQRLGEDISNSLSGQLDSLKIGAQGAVGEAQTQFGQSVAENIGNPVQEGLGQVFSKFGTSPEELLKEEQTLTNGVQQAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIMQQQPAKPSPKTSPSGTPSSTLGREAKELITKATREAEEILQQARSTGAAQAASLLEEAETEALLILKGAEVEKEALLLRANKTEPNTEAETGPAGSEAK 1521
MVLGHHIEPVVSLLLAADNDPSL TLGDLAQQAPDVIGAASDLADSAQASVGESLGAIGNVWDSIVDTVTSAKDQATDTTLGSVDALK QVDELSANALSPFQRLGEDISNSLSGQLDSLKIGAQGAVGEAQTQFGQSVAENIGNPVQEG+GQVFSKFGTSPEELLKEEQTLTNGVQQAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNL GLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIMQQQP +PSPKT SGTPSSTL REAKELITKA RE LQQARSTGAAQAASLLEEAETEALLILKGAEVEKEALLLRANKTEP+TEAET PAGSEAK
Sbjct: 1 MVLGHHIEPVVSLLLAADNDPSLS------------------TLGDLAQQAPDVIGAASDLADSAQASVGESLGAIGNVWDSIVDTVTSAKDQATDTTLGSVDALKYQVDELSANALSPFQRLGEDISNSLSGQLDSLKIGAQGAVGEAQTQFGQSVAENIGNPVQEGMGQVFSKFGTSPEELLKEEQTLTNGVQQAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLGGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIMQQQPTEPSPKTPSSGTPSSTLRREAKELITKAKREXXXXLQQARSTGAAQAASLLEEAETEALLILKGAEVEKEALLLRANKTEPSTEAETRPAGSEAK 434
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match:
A0A835YXE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE1_9STRA)
HSP 1 Score: 198 bits (503), Expect = 1.150e-52
Identity = 88/160 (55.00%), Postives = 113/160 (70.62%), Query Frame = 1
Query: 745 VQQAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIM 1224
+Q + E+VA P F AEN +LPLW GM+ P +KIM Y ++LAAL+Y WLTYE QNPVSL GF+ G +L+ LTKGF +EVSVA W+HF+A+DLF+GRWVYLD +RN ++ HSL LCYLFGP G LSHLLTRG++ + + V DI+
Sbjct: 151 LQHIVTIAEKVATPKRTFLAENILVLPLWGGMIFAPNNKYVQKIMEGYSVIILAALVYAWLTYEALQNPVSLAGFSGGAFDLDTLTKGFTQEVSVADGWAHFIAQDLFVGRWVYLDSKRNSVWAAHSLALCYLFGPIGVLSHLLTRGLSGIFRQDVTDIL 310
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match:
A0A7S3Y5E5_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5E5_HETAK)
HSP 1 Score: 184 bits (466), Expect = 8.100e-47
Identity = 84/169 (49.70%), Postives = 117/169 (69.23%), Query Frame = 1
Query: 766 VERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIMQQQPAKPSPKTSPSGT 1272
+E P+T+F +N A LPLW+ M+ +P+ +TK +M SY P+ +++Y+W Y FQ+P +LQGF+ IT+L LTKGFG EV+VATAW+HF+A+DLF+GR++YLDG +N +FT+HS+ L YLFGPAG LSHL+TRG ++ PG I A PK P T
Sbjct: 280 LETKLTPNTVFTIDNVASLPLWLAMIGFPQNGVTKGLMKSYLPISAFSMLYVWSAYLAFQDPQALQGFSEAITSLPALTKGFGSEVAVATAWAHFIAQDLFVGRFIYLDGLKNGVFTRHSVALAYLFGPAGLLSHLVTRGFVGLLNPGQDIIEAGMSASTIPKPMPQPT 448
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match:
W7U388_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U388_9STRA)
HSP 1 Score: 178 bits (452), Expect = 8.040e-45
Identity = 100/245 (40.82%), Postives = 142/245 (57.96%), Query Frame = 1
Query: 532 LGEDISNSLSGQLDSLKIGAQGAVGEAQTQFGQSVAENIGN---PVQEGLGQ----------VFSKFGT-SPEELLKEEQTLTNGVQQAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIM 1224
LG +I LS +LK VG + G + E G+ P Q L Q V S+F + +EL K+ +TL+ A++ ++ V P LF AEN ILP W +++ P K +++SY P+++AAL Y W Y FQ+P +L+GFAS I++L L+KG G E ATAW+HF+A+DLF+GRW++LDG RN ++T HSL L +LFGP G LSHLLTR + + + DIM
Sbjct: 184 LGAEIKTELS----ALKSQVGEIVGSRLSGLGSAFTEKAGDVLIPYQPFLEQTKRQLGDKFSVVSQFAEQATQELSKDAETLS----PALRALKTVGTPRNLFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFAS-ISDLSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLTRSFVKIFRWDIADIM 419
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match:
A0A7S0KR27_MICPS (Hypothetical protein n=2 Tax=Micromonas TaxID=38832 RepID=A0A7S0KR27_MICPS)
HSP 1 Score: 164 bits (416), Expect = 4.870e-43
Identity = 68/147 (46.26%), Postives = 101/147 (68.71%), Query Frame = 1
Query: 763 GVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVK 1203
G+E + P T+F ENAAI P W+GM+ +P+ +T+ +M SY +L +Y++LTY F +P ++ F++G +L L+KGF E +A W+HF+A DLF+GRW+YLD ++N +F HSL+LC FGP G +SH LTRGVTS+ +
Sbjct: 55 GLEWIPTPETVFDVENAAIFPFWLGMIAFPKNKVTETVMGSYAVPILLGFVYIYLTYYSFSDPRIIEAFSTGKPDLAALSKGFSYEWCMAVGWAHFIAMDLFVGRWIYLDARKNDVFAAHSLLLCLFFGPTGVISHTLTRGVTSLAR 201
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match:
A0A7S3Y5F1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5F1_HETAK)
HSP 1 Score: 162 bits (411), Expect = 1.230e-42
Identity = 74/145 (51.03%), Postives = 102/145 (70.34%), Query Frame = 1
Query: 838 MVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIMQQQPAKPSPKTSPSGT 1272
M+ +P+ +TK +M SY P+ +++Y+W Y FQ+P +LQGF+ IT+L LTKGFG EV+VATAW+HF+A+DLF+GR++YLDG +N +FT+HS+ L YLFGPAG LSHL+TRG ++ PG I A PK P T
Sbjct: 1 MIGFPQNGVTKGLMKSYLPISAFSMLYVWSAYLAFQDPQALQGFSEAITSLPALTKGFGSEVAVATAWAHFIAQDLFVGRFIYLDGLKNGVFTRHSVALAYLFGPAGLLSHLVTRGFVGLLNPGQDIIEAGMSASTIPKPMPQPT 145
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match:
C1N0R2_MICPC (Predicted protein (Fragment) n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N0R2_MICPC)
HSP 1 Score: 140 bits (352), Expect = 2.740e-35
Identity = 60/134 (44.78%), Postives = 87/134 (64.93%), Query Frame = 1
Query: 790 TLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVT 1191
T+F EN AI PLW+GM+ P+ +T+ +M+S + +Y++LT+ F +P L F++G +L L KGF E VA W+HF+A DLF GRW+YLD ++N +F HSL+LC FGP G +SH+ TR +T
Sbjct: 2 TVFNVENVAIFPLWLGMIFAPKSGVTRAVMDSALVPCVCGFVYVYLTWYSFHDPRILDAFSTGKPDLAALAKGFSYEWCVAVGWAHFIAMDLFAGRWIYLDARKNDVFAAHSLLLCLFFGPTGAISHVTTRAIT 135
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match:
A0A0G4GWJ9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GWJ9_VITBC)
HSP 1 Score: 140 bits (354), Expect = 4.870e-34
Identity = 64/135 (47.41%), Postives = 86/135 (63.70%), Query Frame = 1
Query: 784 PSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGV 1188
PS +F A NA +LP W MV+ P +T+K+M S P ++ L+Y+WL P +++G G L LTK F E VAT W HFLAEDLF+GRWVYLDG++N + +HS +L LFGP G +SHL+TR +
Sbjct: 97 PSAVFTASNAFVLPFWALMVIAPGAQVTEKLMRSVTPFIVLGLLYLWLAVISSTFPEAVEGLGQGAGQLPVLTKAFSLEPVVATGWVHFLAEDLFVGRWVYLDGRKNDVPIRHSCLLSLLFGPLGVVSHLVTRDI 231
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match:
UPI001F29C295 (DUF4281 domain-containing protein n=1 Tax=Tychonema sp. BBK16 TaxID=2699888 RepID=UPI001F29C295)
HSP 1 Score: 125 bits (315), Expect = 5.150e-30
Identity = 60/138 (43.48%), Postives = 87/138 (63.04%), Query Frame = 1
Query: 784 PSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITN--LEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVT 1191
P +F N +LP W M++ P +T+K+MNS+ P VL AL+Y++L F + ++ + A+ ++N L + K GEE + AT W HFL DLF+GRW+YL+GQR ++T HSL LC GP G LSH+LT +T
Sbjct: 3 PELIFTVGNLFVLPFWAIMILLPNWGITRKVMNSFIPFVLLALMYIYL----FASSITPEN-AAALSNPKLADIAKFLGEETAAATGWIHFLVMDLFVGRWIYLEGQRTGVWTIHSLALCLFAGPIGLLSHILTHWIT 135
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Match:
UPI0018812FA2 (ABA4-like family protein n=4 Tax=Microcoleaceae TaxID=1892252 RepID=UPI0018812FA2)
HSP 1 Score: 125 bits (313), Expect = 1.120e-29
Identity = 59/139 (42.45%), Postives = 89/139 (64.03%), Query Frame = 1
Query: 784 PSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITN--LEGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTS 1194
P +F A N +LP W M++ P +T+K+MNS+ P V+ AL+Y++L F + ++ + A+ ++N L + K GEE + AT W HFL DLF+GRW+YL+GQR ++T HSL LC GP G LSH++T +T+
Sbjct: 3 PELIFDAGNLFVLPFWAIMILLPNWGITRKVMNSFIPFVVLALLYIYL----FGSSLTAEN-AAALSNPKLADIAKFLGEETAAATGWIHFLVMDLFVGRWIYLEGQRTGVWTVHSLALCLFAGPMGLLSHIVTAWITA 136
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig107.503.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90 )
Total hits: 25
0 1 Expect = 4.73e-277 / Id = 92.48 Expect = 1.15e-52 / Id = 55.00 Expect = 8.10e-47 / Id = 49.70 Expect = 8.04e-45 / Id = 40.82 Expect = 4.87e-43 / Id = 46.26 Expect = 1.23e-42 / Id = 51.03 Expect = 2.74e-35 / Id = 44.78 Expect = 4.87e-34 / Id = 47.41 Expect = 5.15e-30 / Id = 43.48 Expect = 1.12e-29 / Id = 42.45 Sequence D7FJ04_ECTSI A0A835YXE1_9STRA A0A7S3Y5E5_HETAK W7U388_9STRA A0A7S0KR27_MICPS A0A7S3Y5F1_HETAK C1N0R2_MICPC A0A0G4GWJ9_VITBC UPI001F29C295 UPI0018812FA2
Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Start 1
Stop 1
Cds size 1620
Model size 2097
Exons 7
Hectar predicted targeting category signal peptide
Best eggNOG OG NA|NA|NA
Best tax level Eukaryota
COG Functional cat. S
EggNOG OGs 28P8V@1,2QVVZ@2759
EggNOG free text desc. xanthophyll metabolic process
GOs GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006082,GO:0006629,GO:0006714,GO:0006720,GO:0006721,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009507,GO:0009526,GO:0009536,GO:0009687,GO:0009688,GO:0009941,GO:0009987,GO:0016053,GO:0016106,GO:0016108,GO:0016109,GO:0016114,GO:0016116,GO:0016117,GO:0016122,GO:0016123,GO:0019222,GO:0019752,GO:0031323,GO:0031967,GO:0031975,GO:0032787,GO:0032928,GO:0042440,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043288,GO:0043289,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046148,GO:0046165,GO:0046394,GO:0050789,GO:0050794,GO:0065007,GO:0071704,GO:0072330,GO:0090322,GO:1901576,GO:1901615,GO:1901617,GO:1902644,GO:1902645,GO:2000377
Seed eggNOG ortholog 2880.D7FJ04
Seed ortholog evalue 2.2e-224
Seed ortholog score 785.0
Taxonomic scope Eukaryota
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622927572.3789017-UTR-E-siliculosus-1a_F_contig107:64481..64958 1622927572.3789017-UTR-E-siliculosus-1a_F_contig107:64481..64958 Ectocarpus siliculosus Ec863f_EcPH12_90f female UTR E-siliculosus-1a_F_contig107 64482..64958 -
1696318591.9676864-UTR-E-siliculosus-1a_F_contig107:64481..64958 1696318591.9676864-UTR-E-siliculosus-1a_F_contig107:64481..64958 Ectocarpus siliculosus Ec863f_EcPH12_90f female UTR E-siliculosus-1a_F_contig107 64482..64958 -
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig107.503.1
>prot_E-siliculosus-1a_F_contig107.503.1 ID=prot_E-siliculosus-1a_F_contig107.503.1|Name=mRNA_E-siliculosus-1a_F_contig107.503.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=540bp
MTGSSTLFVVSSVAILARDCNSLLVHPHLSDSRLSTSAATSYSSSSSSSG TRPLRMVLGHHIEPVVSLLLAADNDPSLRCGSSLGQTQRQLCERAHITLG DLAQQAPDVIGAASDLADSAQASVGESLGAIGNVWDSIVDTVTSAKDQAT DTTLGSVDALKSQVDELSANALSPFQRLGEDISNSLSGQLDSLKIGAQGA VGEAQTQFGQSVAENIGNPVQEGLGQVFSKFGTSPEELLKEEQTLTNGVQ QAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLV LAALIYMWLTYECFQNPVSLQGFASGITNLEGLTKGFGEEVSVATAWSHF LAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVV KPGVRDIMQQQPAKPSPKTSPSGTPSSTLGREAKELITKATREAEEILQQ ARSTGAAQAASLLEEAETEALLILKGAEVEKEALLLRANKTEPNTEAETG PAGSEAKVGSEAKAGSEAKAGSEAKAGSEAKTASAKIEP* back to top mRNA from alignment at E-siliculosus-1a_F_contig107:64482..69778-
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig107.503.1 ID=mRNA_E-siliculosus-1a_F_contig107.503.1|Name=mRNA_E-siliculosus-1a_F_contig107.503.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=5297bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig107:64482..69778- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)ATGACTGGGTCATCTACGTTGTTTGTGGTATCGAGTGTAGCCATCCTGGC
GCGAGATTGCAACAGCCTTCTAGTGCATCCACATTTATCCGATAGTCGAC
TCTCTACGTCGGCAGCAACTTCGTACAGCAGCAGCAGCAGCAGCAGCGGT
ACGCGGCCACTTCGCATGGTGCTCGGCCATCACATCGAACCCGTGGTATC
GCTACTCTTGGCCGCAGATAATGACCCTTCGCTCAGGTGTGGAAGTTCTC
TGGGCCAAACGCAACGTCAATTATGTGAGAGAGCGCACAT GTAAACTTTA
ACTTTGGATATCCATCCCGCGACGAGTTCAACTACAGCGGTATCCCAACG
GACACCGCATCTACGCCAGCCCTACCATGTCATCGCTTTGCCCAAATAGA
ATGTATATGTGAACTTTTACGACTCTTCCCTACTTTCAATTGGTGGACGC
GTTGGCGTATCTCGCTTTTGAATGGGCGCTCCGAGGACTGAGTTATGTGT
ATGCTGTGGGCGTGCCCCTGACTTGTGTAATTGGTCTCCTTCGTAACAAA
TGCAACATGCAACAAACGGTCACGCAGTACTCTCGGCGATCTGGCACAGC
AAGCTCCGGACGTGATAGGAGCTGCTTCAGATCTGGCAGACTCTGCGCAG
GCTTCGGTTGGCGAATCCCTTGGTGCAATAGGAAATGTTTGGGACTCGAT
CGTCGACACGGTTACGTCGGCCAAAGACCAG GTGTGTGTGTGGGGAAGCC
GAAGTTGAAGTATATGTGTGCTGCATACAAGGGCGCTTCGAGTAGGCTGT
ATGTACAATATGGCGATGTATGTGCGAGTCGAGTTTTAAGATGAGAGGCA
AGAGACGTGTGGCATATGCATGTGTATGTGAAGAGTTGTTGTGCTCATTT
ATTTGTTCGAAGAGCGGATACATACGCACAATGGGTGTATACCGAAGTAA
AGCGACGGCCGGAGGACAGCGAGAGGAAAACTTGCAGATGTGGCAAGTGG
CAAGAAACACCGCAGCAAGAACAATGTCGTCGAGTCATGTAGTTGTACGC
ATACAGAGACCATGCACCGAAATGGACCTGTATGTACCGCTCCAACACCA
CACCGGAAAACAAATAATTCCAAGTTTTATATTATATCCCGATAGGGCGG
CGGGGAGGACATACACATTTGCCCCGATGGACGCAACGCGTCCTAAGCTT
TACTTCCCTAGAGGTACTGATTTCTGATTCCGAACCCTCCACCCACTGCT
GTCCACATTTTTTCAATGGCCTAAGAACCTAGGATATGGCCCTATCCCCA
AACCGACCCAAAGGGCTCGGTTGCTGTGCACTGCTGTGCACCATTAGTAG
TGCTAGGTTGCTGTGCACGGGCTGCACCTGCCCAAGGAGTCTTCCAAGAT
ATGGCATTTCGACATGGAGACCACCACGTTAGACCCAGTCACCCATTCGT
AGTACTTTGTACACAGTGTACTTGAGGTGTAGTTTCCAGGCTTCTTTGCG
CACGACACCGAGCGCAACCCCCCCCCCGCTTTTCTTCGGGAGCGAAAGGG
AGACACACTACAGCAGTAGGGTACTTTGTCTTGTGGTATGCGGAGACTTG
GTTGCTTGGTCGTCGCGTCTGGCGAGGGTATGTACATGTAGCCAGCGCAC
AAAATTGGACGACGTCAGCCTCTTGAGCAATGTACGTATGAATGTGGCCT
GGACTGTCACTAAATCGTGCTGTGATTGGGCGAGTCGTGGTTGATCTCAG
ACGCGACTTTCTGCCCTCCCTAGCGCGTGGCACAGCGGGAGGGCGCTCGC
AACTCAGGGCTATCCTTAGATTCAAGTCTCGCCACGTGGCGAGGTCCAGG
GGCGAAGAAACCGCAAAAAAACAGCTCTAGACGCACGAGAGCATCAGGAT
TGCAAATGCTGCAAGCTCGTGAGCCCTCAGCCCGCAGGAAGGTCGTCTAT
AGGTCCAGTACAGCTGCACTCAGTAGCACTGGTTCTTAAAATTTGTATTC
CTTTCGAGGGACAGACCTTGAGCATACAGCAGTTGAGGGCGATTGCTGGG
ATCGATATGCATACCCGGCATACACATCAATTCGACGCTCTACCTCCTTG
CGTTGCTTATGGTCAAGCCGTTGCATTTTCAACTGATGACCTGACGCCAC
TTCTACATGATGTTGTGTTTTCACGTTTCCACAGGCTACCGACACCACTC
TGGGATCGGTTGATGCGCTCAAGTCTCAG GTGCGAAGTTAGGCAAGAGTC
GTGTCTTGCCAATATTTTGAGGCACCTCGCCGCATAGGTGCGATCGATTG
AGCGATTCGCCGTCGTGGTGCAGGGCTTGATGTGCTTCTTGCGCGTTTCG
CCTAGCGGAGAGTCTTCCTGTTTTTCTACAAATTTGTCATCCAGGCAATG
TGCTGCTGTACCTACTGCCTGGCCTCACGAAGCCCCATCCGGTTGCCAGC
AGAAGATTTGCTCTGCGGGGTATGTCTCCATCAAGTAACGGTTTCCATGC
GCATGTCCACCATCTACTTACGATGTGACCATCTTTGTTTACTGCATCGG
CCATGATTATGATTGCGACAGGTGGACGAGTTAAGTGCGAATGCTCTCTC
CCCCTTTCAACGGCTTGGTGAGGATATTTCGAATAGTTTAAGCGGACAGC
TGGACAGCTTAAAAATTGGAGCGCAGGGCGCTGTGGGAGAAGCACAGACG
CAGTTCGGCCAGTCTGTGGCGGAAAACATCGGAAATCCTGTCCAG GTGCC
CACTTTGCAGCTCTTAAGTGCCCGGTGTGGGCTGCACGTCTAATCCTCTC
TTTACAAGAGCTGTCGTTCTCGGAAAACCTTGCTTCGGTCGATGTGTGCG
TACACACGCTTGTAATAGATGGGATGGTTAAAGGGAACGCGGACAAGGGA
GGCCAAACGGTTCTAGACTACATCGAACATGACGCAGGGTCGAAAGAATG
AAAATGCTGCTTCCATATCACTAGCTGGTATTGAATAGACGCGACGCGCG
CGATGGGACGCTCAGATCTACTGATGGGACTGCTGTAATATCGAAGGCTG
CCGCTGGCCCCAAAACTCCTCAAGTGGGGATCCAAACCAAGCAGTCGTTG
CCGCTGTAATGTCCGCCACGAGCCTTAATTTCCGATACTGCGGGCGTCCA
AGGATAGCTAGTTGTAGGAGCTACTGCTGTGGCTATGGGTCTGTGATGGT
GAATGCTGCGAAGATGAATGATTTGACCCAGCATTGCGGACTTTCCGGAC
CGAAGCTACAGCCTTCGATGGCACTAGCTAGCCCAACAGCAGATCTGAGC
GTGTCAGCACACCTCCGAAAAAATTTCAGTTTAGGTTTCGGGGAAAATTT
CTTTGAGTTCGCAGGAAATAAGTTCCCCGTCAATAGATCGGCCTTGACAT
ATCTCGTGCATGGTTGCTGGGGGCTTGTTTTGTCGTTTCAAAACCACTCA
CAATAAATATTGTTGGTTGTCCACGTCCCCTTCAAGCTCACAATCGTCAA
ACGCACTTGCCTCCTCCTTTTGCGAATAAGATGTCCCTCTAAGCATCCGT
TTCGAACGATGGCAGGAGGGCCTGGGTCAAGTTTTCAGCAAGTTCGGAAC
CAGCCCCGAGGAGCTACTCAAAGAGGAACAGACATTAACAAACGGCGTGC
AGCAG GTACGGTTGTGGTTTCCAGTCCTTGGTCATATCTCGGCGTCATGA
AACGATTGGTCCGGTTGAACGTGCTTGAAGCGCCGACCAGTTCTCAGTCA
CCTGATTTCCCCGCCGCGCATTCGTTTCTGTAACGGGCACAGGCGATCAA
GGGGGTCGAGCGGGTAGCACCTCCGAGCACTCTGTTCTACGCAGAAAATG
CCGCGATTCTGCCCTTGTGGGTAGGTATGGTTGTTTGGCCTGAAGAGCCT
CTGACCAAGAAAATCATGAACAGCTACGGGCCCCTCGTCTTGGCGGCTCT
GATCTACATGTGGCTGACCTACGAGTGCTTCCAAAACCCTGTCTCACTGC
AAGGGTTTGCGAGTGGCATCACTAATCTTGAAGGGTTAACAAAAGGTTTT
GGAGAAGAGGTATCGGTGGCGACAGCCTGGTCCCACTTTCTGGCAGAGGA
TCTTTTCATCGGACGTTGGGTGTACTTGGATGGCCAGAGGAACAAAATCT
TCACAAAGCACTCGCTGGTCTTGTGCTACTTGTTCGGCCCAGCTGGTTTC
TTGAGTCACTTGCTTACCCGCGGGGTGACGAGCGTGGTCAAGCCAGGTGT
CCGAGATATCATGCAACAACAGCCTGCCAAACCATCGCCGAAAACGTCTC
CTTCCGGGACACCTTCCTCGACACTTGGTAGAGAGGCTAAAGAGCTCATC
ACCAAAGCCACCCGGGAAGCAGAAGAAATACTCCAGCAAGCGCGATCAAC
CGGAGCTGCGCAAGCTGCATCTTTGCTGGAG GTGGGTGCTATTCATACAT
GTCATGCCTGGTTTCCGAGACTGGATTCGATGACCTCCTTCGCACGACGA
GGTTGGAGATCTATGTATGAACTGTTTTGTCATGCGAGACTCAAAGCGCA
CCGTTATTGCCTTGGCGTTCTGTTCTGTTTGTTCTTGCCCAGGAGGCGGA
GACGGAGGCCCTTCTGATATTGAAAGGAGCAGAGGTAGAGAAAGAAGCAC
TCCTGTTGAGAGCGAACAAGACTGAGCCAAATACGGAGGCGGAGACTGGA
CCAGCAGGCTCAGAGGCAAAGGTCGGATCAGAGGCAAAGGCTGGGTCAGA
GGCAAAGGCCGGATCAGAGGCAAAGGCTGGGTCAGAGGCAAAGACCGCGT
CAGCAAAAATCGAGCCATAA ATCCTTTGACGGGAACGACTTGTATTTGAT
ATCAAGAATTATGGAATATGCTGAGCACTAAGCCAGAGTAGTGCTGGGGT
CGGGTCAGATTCGAGAGTGATGAAGGCATCCATCCGCTCGTGAGTTTAGG
GGCGTTGCAAGGAGCCTGCCAACATGTGCATTTTGCAAGATTATATTTTG
ACTGAATTGTTTTCGGAGGGAACCTACCAACTGCTGTTACCATAGTTTCT
CTTTAGCGCACAGTGCTACTACGTCGGGAAATTGGTCACGTTTACATACG
TTGTCACACTTTGCCAAACCGTTTCCACGAGACTAGCCGATGATGTCTGG
TTGGTGGTTAGGGTTAGGGTTCCGGCAGAGTCGTAGCACCCTTGGCCATC
ATGCGCAGCTGTGCTGTCGTTGTTAGCACGCTGACTCACATTTTCCGGCA
GCGTTTGTACATCAATCGCTGTCTCCGCTACTGTAGTCTAAAAAAGC back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig107:64482..69778-
>mRNA_E-siliculosus-1a_F_contig107.503.1 ID=mRNA_E-siliculosus-1a_F_contig107.503.1|Name=mRNA_E-siliculosus-1a_F_contig107.503.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3240bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig107:64482..69778- (Ectocarpus siliculosus Ec863f_EcPH12_90f female) ATGACTGGGTCATCTACGTTGTTTGTGGTATCGAGTGTAGCCATCCTGGC GCGAGATTGCAACAGCCTTCTAGTGCATCCACATTTATCCGATAGTCGAC TCTCTACGTCGGCAGCAACTTCGTACAGCAGCAGCAGCAGCAGCAGCGGT ACGCGGCCACTTCGCATGGTGCTCGGCCATCACATCGAACCCGTGGTATC GCTACTCTTGGCCGCAGATAATGACCCTTCGCTCAGGTGTGGAAGTTCTC TGGGCCAAACGCAACGTCAATTATGTGAGAGAGCGCACATATGACTGGGT CATCTACGTTGTTTGTGGTATCGAGTGTAGCCATCCTGGCGCGAGATTGC AACAGCCTTCTAGTGCATCCACATTTATCCGATAGTCGACTCTCTACGTC GGCAGCAACTTCGTACAGCAGCAGCAGCAGCAGCAGCGGTACGCGGCCAC TTCGCATGGTGCTCGGCCATCACATCGAACCCGTGGTATCGCTACTCTTG GCCGCAGATAATGACCCTTCGCTCAGGTGTGGAAGTTCTCTGGGCCAAAC GCAACGTCAATTATGTGAGAGAGCGCACATTACTCTCGGCGATCTGGCAC AGCAAGCTCCGGACGTGATAGGAGCTGCTTCAGATCTGGCAGACTCTGCG CAGGCTTCGGTTGGCGAATCCCTTGGTGCAATAGGAAATGTTTGGGACTC GATCGTCGACACGGTTACGTCGGCCAAAGACCAGTACTCTCGGCGATCTG GCACAGCAAGCTCCGGACGTGATAGGAGCTGCTTCAGATCTGGCAGACTC TGCGCAGGCTTCGGTTGGCGAATCCCTTGGTGCAATAGGAAATGTTTGGG ACTCGATCGTCGACACGGTTACGTCGGCCAAAGACCAGGCTACCGACACC ACTCTGGGATCGGTTGATGCGCTCAAGTCTCAGGCTACCGACACCACTCT GGGATCGGTTGATGCGCTCAAGTCTCAGGTGGACGAGTTAAGTGCGAATG CTCTCTCCCCCTTTCAACGGCTTGGTGAGGATATTTCGAATAGTTTAAGC GGACAGCTGGACAGCTTAAAAATTGGAGCGCAGGGCGCTGTGGGAGAAGC ACAGACGCAGTTCGGCCAGTCTGTGGCGGAAAACATCGGAAATCCTGTCC AGGTGGACGAGTTAAGTGCGAATGCTCTCTCCCCCTTTCAACGGCTTGGT GAGGATATTTCGAATAGTTTAAGCGGACAGCTGGACAGCTTAAAAATTGG AGCGCAGGGCGCTGTGGGAGAAGCACAGACGCAGTTCGGCCAGTCTGTGG CGGAAAACATCGGAAATCCTGTCCAGGAGGGCCTGGGTCAAGTTTTCAGC AAGTTCGGAACCAGCCCCGAGGAGCTACTCAAAGAGGAACAGACATTAAC AAACGGCGTGCAGCAGGAGGGCCTGGGTCAAGTTTTCAGCAAGTTCGGAA CCAGCCCCGAGGAGCTACTCAAAGAGGAACAGACATTAACAAACGGCGTG CAGCAGGCGATCAAGGGGGTCGAGCGGGTAGCACCTCCGAGCACTCTGTT CTACGCAGAAAATGCCGCGATTCTGCCCTTGTGGGTAGGTATGGTTGTTT GGCCTGAAGAGCCTCTGACCAAGAAAATCATGAACAGCTACGGGCCCCTC GTCTTGGCGGCTCTGATCTACATGTGGCTGACCTACGAGTGCTTCCAAAA CCCTGTCTCACTGCAAGGGTTTGCGAGTGGCATCACTAATCTTGAAGGGT TAACAAAAGGTTTTGGAGAAGAGGTATCGGTGGCGACAGCCTGGTCCCAC TTTCTGGCAGAGGATCTTTTCATCGGACGTTGGGTGTACTTGGATGGCCA GAGGAACAAAATCTTCACAAAGCACTCGCTGGTCTTGTGCTACTTGTTCG GCCCAGCTGGTTTCTTGAGTCACTTGCTTACCCGCGGGGTGACGAGCGTG GTCAAGCCAGGTGTCCGAGATATCATGCAACAACAGCCTGCCAAACCATC GCCGAAAACGTCTCCTTCCGGGACACCTTCCTCGACACTTGGTAGAGAGG CTAAAGAGCTCATCACCAAAGCCACCCGGGAAGCAGAAGAAATACTCCAG CAAGCGCGATCAACCGGAGCTGCGCAAGCTGCATCTTTGCTGGAGGCGAT CAAGGGGGTCGAGCGGGTAGCACCTCCGAGCACTCTGTTCTACGCAGAAA ATGCCGCGATTCTGCCCTTGTGGGTAGGTATGGTTGTTTGGCCTGAAGAG CCTCTGACCAAGAAAATCATGAACAGCTACGGGCCCCTCGTCTTGGCGGC TCTGATCTACATGTGGCTGACCTACGAGTGCTTCCAAAACCCTGTCTCAC TGCAAGGGTTTGCGAGTGGCATCACTAATCTTGAAGGGTTAACAAAAGGT TTTGGAGAAGAGGTATCGGTGGCGACAGCCTGGTCCCACTTTCTGGCAGA GGATCTTTTCATCGGACGTTGGGTGTACTTGGATGGCCAGAGGAACAAAA TCTTCACAAAGCACTCGCTGGTCTTGTGCTACTTGTTCGGCCCAGCTGGT TTCTTGAGTCACTTGCTTACCCGCGGGGTGACGAGCGTGGTCAAGCCAGG TGTCCGAGATATCATGCAACAACAGCCTGCCAAACCATCGCCGAAAACGT CTCCTTCCGGGACACCTTCCTCGACACTTGGTAGAGAGGCTAAAGAGCTC ATCACCAAAGCCACCCGGGAAGCAGAAGAAATACTCCAGCAAGCGCGATC AACCGGAGCTGCGCAAGCTGCATCTTTGCTGGAGGAGGCGGAGACGGAGG CCCTTCTGATATTGAAAGGAGCAGAGGTAGAGAAAGAAGCACTCCTGTTG AGAGCGAACAAGACTGAGCCAAATACGGAGGCGGAGACTGGACCAGCAGG CTCAGAGGCAAAGGTCGGATCAGAGGCAAAGGCTGGGTCAGAGGCAAAGG CCGGATCAGAGGCAAAGGCTGGGTCAGAGGCAAAGACCGCGTCAGCAAAA ATCGAGCCATAAGAGGCGGAGACGGAGGCCCTTCTGATATTGAAAGGAGC AGAGGTAGAGAAAGAAGCACTCCTGTTGAGAGCGAACAAGACTGAGCCAA ATACGGAGGCGGAGACTGGACCAGCAGGCTCAGAGGCAAAGGTCGGATCA GAGGCAAAGGCTGGGTCAGAGGCAAAGGCCGGATCAGAGGCAAAGGCTGG GTCAGAGGCAAAGACCGCGTCAGCAAAAATCGAGCCATAA back to top