prot_E-fasciculatus_F_contig10024.41.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10024.41.1
Unique Nameprot_E-fasciculatus_F_contig10024.41.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length76
Homology
BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: D7FY66_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY66_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 5.160e-47
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0
Query:    1 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 76
            EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD
Sbjct:  307 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 382          
BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A6H5JRH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH0_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.700e-30
Identity = 52/59 (88.14%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQI 59
            EIDFPKSS++ VCFECTAR VSW +LMTGMETGMRALGHANETYFRVNEEGILCIQHQ+
Sbjct:  224 EIDFPKSSQSLVCFECTARGVSWAFLMTGMETGMRALGHANETYFRVNEEGILCIQHQV 282          
BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A835YYW5_9STRA (Repair protein Rad1/Rec1/Rad17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYW5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 6.690e-19
Identity = 39/73 (53.42%), Postives = 54/73 (73.97%), Query Frame = 0
Query:    2 IDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLC 74
            I FP+SSEAFV F CT   + W+Y ++ +E GMRAL  A ET+ R+NEEGI+CIQHQ+ ++ G  ++VD L+C
Sbjct:  229 IQFPRSSEAFVHFSCTPPSLRWSYALSALEGGMRALPFAQETFVRINEEGIMCIQHQVQVA-GHNTYVDFLIC 300          
BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A7S0XDK7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDK7_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 5.500e-16
Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    1 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 76
            EI+FP+ S+ FV F C  +   WTY +T ++ GM+AL  + ET+ R+NEEG++CIQHQI  + G   ++D L+  D
Sbjct:  149 EIEFPRLSDLFVSFRCD-KSSKWTYPLTSLQLGMKALNISKETFIRMNEEGVICIQHQIETNRGHEIYIDYLMVSD 223          
BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A4D9CMN7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CMN7_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.380e-15
Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    1 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMG-QTSFVDVL 72
            EI  PKSSEAFV F+C+  R SW+Y +  +  GMRAL  A ETY R+NEEGI+C+QHQ+  +   Q++F+D L
Sbjct:  212 EIFLPKSSEAFVHFDCSEAR-SWSYGLGALNQGMRALTVAKETYVRINEEGIMCVQHQVENTASRQSTFIDFL 283          
BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A7S2G8B6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8B6_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.840e-11
Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 0
Query:    1 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 76
            +I+FP+SS+ F  FECT   +   Y       GMRAL  + E+YFR+NE G+LCIQH +    G   F+D ++ P+
Sbjct:  190 DIEFPRSSDLFELFECT-ETMKTEYDYDSFVQGMRALTVSEESYFRINEGGLLCIQHHVETHGGGRCFIDFIMLPN 264          
BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A8K1C6J7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6J7_PYTOL)

HSP 1 Score: 65.5 bits (158), Expect = 9.670e-11
Identity = 32/82 (39.02%), Postives = 48/82 (58.54%), Query Frame = 0
Query:    1 EIDFPKSSEAFVCFECTARRVS------WTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIPMSMGQTSFVDVLLCPD 76
            EI+F +SS AF+ F CT    S       T+ +  ++   +ALGH+NET+ R+N +G L +QH I    G  +FVD L+ P+
Sbjct:  263 EIEFARSSSAFIEFFCTNDETSDDGSASATFHVAVLQQAFKALGHSNETFLRMNADGFLSVQHMIESGSGDKAFVDALISPE 344          
BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: F0XY36_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XY36_AURAN)

HSP 1 Score: 61.6 bits (148), Expect = 2.590e-9
Identity = 31/78 (39.74%), Postives = 44/78 (56.41%), Query Frame = 0
Query:    1 EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEEGILCIQHQIP--MSMGQTSFVDVLLCPD 76
            +ID P+  +AFV FE      SWTY       GM+AL H++ETY RVN+ G+L +QH +      G   +++ L C D
Sbjct:  205 QIDVPR--DAFVVFEAPEETRSWTYQTQAFLHGMKALPHSHETYVRVNDHGMLLVQHMVANDRGAGDNMYLEYLCCSD 280          
BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Match: A0A7S4NJK3_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NJK3_9EUKA)

HSP 1 Score: 57.4 bits (137), Expect = 6.610e-8
Identity = 30/76 (39.47%), Postives = 49/76 (64.47%), Query Frame = 0
Query:    2 IDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGH-ANETYFRVNEEGILCIQHQIPMSMGQ-TSFVDVLLCP 75
            I FP+ S AFV F+C + ++ +TY +  ++  ++A G+ A +T  R+NE G+LC+QH + +  G+ T FVD  L P
Sbjct:  216 IQFPRDSPAFVEFDCRSTQI-FTYKLQHLQPALKASGNLATQTQIRMNERGMLCMQHMLSVPDGKKTCFVDFYLLP 290          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10024.41.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FY66_ECTSI5.160e-47100.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRH0_9PHAE3.700e-3088.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYW5_9STRA6.690e-1953.42Repair protein Rad1/Rec1/Rad17-domain-containing p... [more]
A0A7S0XDK7_9STRA5.500e-1644.74Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
A0A4D9CMN7_9STRA2.380e-1553.42Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2G8B6_9STRA1.840e-1142.11Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8K1C6J7_PYTOL9.670e-1139.02Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0XY36_AURAN2.590e-939.74Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S4NJK3_9EUKA6.610e-839.47Hypothetical protein n=1 Tax=Paramoeba aestuarina ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.70.10.10coord: 1..76
e-value: 1.5E-18
score: 68.7
IPR003021Rad1/Rec1/Rad17PFAMPF02144Rad1coord: 1..57
e-value: 1.5E-4
score: 21.0
IPR003021Rad1/Rec1/Rad17PANTHERPTHR10870CELL CYCLE CHECKPOINT PROTEIN RAD1coord: 1..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10024contigE-fasciculatus_F_contig10024:3844..4945 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10024.41.1mRNA_E-fasciculatus_F_contig10024.41.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10024 3844..4945 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10024.41.1 ID=prot_E-fasciculatus_F_contig10024.41.1|Name=mRNA_E-fasciculatus_F_contig10024.41.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=76bp
EIDFPKSSEAFVCFECTARRVSWTYLMTGMETGMRALGHANETYFRVNEE
GILCIQHQIPMSMGQTSFVDVLLCPD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003021Rad1_Rec1_Rad17