prot_E-fasciculatus_F_contig1599.4100.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1599.4100.1
Unique Nameprot_E-fasciculatus_F_contig1599.4100.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length1013
Homology
BLAST of mRNA_E-fasciculatus_F_contig1599.4100.1 vs. uniprot
Match: D8LTM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTM0_ECTSI)

HSP 1 Score: 1061 bits (2744), Expect = 0.000e+0
Identity = 754/1004 (75.10%), Postives = 780/1004 (77.69%), Query Frame = 0
Query:    9 MPAPGFAALFEVAALSAGLTVAGIVGSRFVVRWHQCSGNADLSAAVSGLAAALLTLFFCLYGLAYWFNGIGGYDCLAFSTVMGASLSASNALAFIHLFILSNSMHRANSRWKHFRWLGVIIVVFHWVALVALEGTRTAGKEERGGCAGESRCVTDVDSLALTVKWVAQLLNQLFQTVAFLVPLPRPATGAANDVRLFSGGLKATGSCRKCLGIPVWQTIISEGLSLVMTITVAGIALAKAKGGVDSTPMFAVEVLDNIVNLAAIFYAVHARPKFFHPRPKSLSQLLDSASSGNTSSSLMGSFGGNVPXXXXXXXXXXXXXXAYRGRRRSESSISADGRGYAEGGSGRGDIGGLRGSGYGNSSNVGGRLPRPHSIGVTSSTPSFSSFHASSLQRRYSSGPIRRLPPVVDMSPESSGHGSPSRSSFNSRGQSPPPAAPSSNLPPKSEPPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASARTPGVAEVSPSSSRGTPYPARARGAAEKGSGSGRHGRPVGALYFSSRATKSMRRTPGSYTTGTASGNADGAVVNTGIAFTRGTPIRSMSARAAGAKHDDSISAVRSASTASVTXXXXXXXXXXXTAAERIPSRCSSISTMPAAAPELASDDREHDAAAAATARLGIPDAVVTSAPWKWHQQPGLAKLQRPFQSTNNWASSHLMKVALATDASSGSFSAVSSETTSSTSPERHAEAHKKMATETPDGVRIAAXXXXXXXAHTVVWPLPLNASGRASPPPGGRRHARLSARSLASLPSAAQGRTEKKEARRTGSGSRRKWHHKKRAKRVTETQSGAPTTAASATVAPGGKPPSSFVWREVGLQGTGSNPEAPXXXXXXXXXSTTNEVGASAAETGKRPPLERRTSSSATSRSRYSXXXXXXXXXXXXCSSSFDGNDNQRGAPAATVRSPASFLEGNDSNG 1012
            MPAPGFAALFEVAAL A LTVA +VGSRFVVRWHQCSG ADLSAAVSGLAAALLTLF CL GLAYWFNGIGGYDCLAFSTVMGASLSASNA+AFIHLFILSNSMHRANSRWKHFRWLGVII VFHWVALVALEGTRTAGKEE GGCAGESRCVTDVD LAL VKWVAQLLNQLFQTVAFLVPL  P  GAAN VRLFSGGLKATGSCRKCL I VWQTIISEGLSLVMTITVAGIALAKAKGG+ +TP+FAVEVLDNIVNLAAIFYAVH                                                                                                                           RRYSSGPIRRLPPVVDMSPESSGHGS SRSS NSRGQSPPPA PSSNLPPKSE PAA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 VAEVSPSSSRGTPY ARARGA EKGSGSGR+GRPVGALYF+SR TK+MRRTPGS ++GTA GNADGAVVNTGIA  R  P RSMSARAAGAKHD+S SAVRSASTAS+TXXXXXXXXXXXTAA+RIPSRCSSISTMPAAAPELA DDRE  AA A T+RLGIPDAVVT+APWKWHQQPGL KLQRP +STNNWASS LMKVALATDASSGSFSAVSSETTSS+SPERHAEAHKKMATETPDGVRIAAXXXXXXX HTVVWPLPLNAS RASPP GG+RHARLSAR+LAS PSAA+ R EKKEARRTGSGSRR WH         E                GG+PPSSF+WREVGLQGT S+PEAP XXXXXXXX+TTN+VGA AAET KRPPLERRTSSSAT+RSRYS    XXXXXXXXCSSSFDGNDNQRGAPAATVRSPASF EGNDSNG
Sbjct:    1 MPAPGFAALFEVAALGAALTVASVVGSRFVVRWHQCSGTADLSAAVSGLAAALLTLFLCLNGLAYWFNGIGGYDCLAFSTVMGASLSASNAMAFIHLFILSNSMHRANSRWKHFRWLGVIITVFHWVALVALEGTRTAGKEEHGGCAGESRCVTDVDGLALAVKWVAQLLNQLFQTVAFLVPLRMPVAGAANGVRLFSGGLKATGSCRKCLNISVWQTIISEGLSLVMTITVAGIALAKAKGGLGNTPVFAVEVLDNIVNLAAIFYAVH---------------------------------------------------------------------------------------------------------------------------RRYSSGPIRRLPPVVDMSPESSGHGSLSRSSSNSRGQSPPPAVPSSNLPPKSEAPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------VAEVSPSSSRGTPYTARARGAVEKGSGSGRYGRPVGALYFASRTTKNMRRTPGSSSSGTALGNADGAVVNTGIAIARSMPPRSMSARAAGAKHDESTSAVRSASTASLTXXXXXXXXXXXTAADRIPSRCSSISTMPAAAPELAGDDREPGAAVA-TSRLGIPDAVVTAAPWKWHQQPGLTKLQRPLRSTNNWASSRLMKVALATDASSGSFSAVSSETTSSSSPERHAEAHKKMATETPDGVRIAAXXXXXXXXHTVVWPLPLNASSRASPPSGGKRHARLSARTLASSPSAAKVRAEKKEARRTGSGSRRNWHXXXXXXXXXEXXXXXXXXXXXXXXXXGGRPPSSFLWREVGLQGTCSHPEAPDXXXXXXXXATTNDVGAHAAETCKRPPLERRTSSSATNRSRYSAAAWXXXXXXXXCSSSFDGNDNQRGAPAATVRSPASFYEGNDSNG 863          
BLAST of mRNA_E-fasciculatus_F_contig1599.4100.1 vs. uniprot
Match: A0A6H5JF49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF49_9PHAE)

HSP 1 Score: 884 bits (2285), Expect = 5.540e-310
Identity = 646/943 (68.50%), Postives = 670/943 (71.05%), Query Frame = 0
Query:   70 GLAYWFNGIGGYDCLAFSTVMGASLSASNALAFIHLFILSNSMHRANSRWKHFRWLGVIIVVFHWVALVALEGTRTAGKEERGGCAGESRCVTDVDSLALTVKWVAQLLNQLFQTVAFLVPLPRPATGAANDVRLFSGGLKATGSCRKCLGIPVWQTIISEGLSLVMTITVAGIALAKAKGGVDSTPMFAVEVLDNIVNLAAIFYAVHARPKFFHPRPKSLSQLLDSASSGNTSSSLMGSFGGNVPXXXXXXXXXXXXXXAYRGRRRSESSISADGRGYAEGGSGRGDIGGLRGSGYGNSSNVGGRLPRPHSIGVTSSTPSFSSFHASSLQRRYSSGPIRRLPPVVDMSPESSGHGSPSRSSFNSRGQSPPPAAPSSNLPPKSEPPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASARTPGVAEVSPSSSRGTPYPARARGAAEKGSGSGRHGRPVGALYFSSRATKSMRRTPGSYTTGTASGNADGAVVNTGIAFTRGTPIRSMSARAAGAKHDDSISAVRSASTASVTXXXXXXXXXXXTAAERIPSRCSSISTMPAAAPELASDDREHDAAAAATARLGIPDAVVTSAPWKWHQQPGLAKLQRPFQSTNNWASSHLMKVALATDASSGSFSAVSSETTSSTSPERHAEAHKKMATETPDGVRIAAXXXXXXXAHTVVWPLPLNASGRASPPPGGRRHARLSARSLASLPSAAQGRTEKKEARRTGSGSRRKWHHKKRAKRVTETQSGAPTTAASATVAPGGKPPSSFVWREVGLQGTGSNPEAPXXXXXXXXXSTTNEVGASAAETGKRPPLERRTSSSATSRSRYSXXXXXXXXXXXXCSSSFDGNDNQRGAPAATVRSPASFLEGNDSNG 1012
            GLAYWFNGIGGYDC AFST+MGASLSASNA+ FIHLFILSNSMHRANSRWKHFRW GVII+VFHWVALVALEGTRTAGKEERGGCAGESRCVTDVD LALTVKW+ QLLNQ+FQTVAFLVPL  PA  AAN VRLFSGGLKATGSCRKCL I                                                                                                                                                                              ASSLQRRYSSGPIRRLPPVVDMSPESSGHGSPSRSS NS G+SPPPA PSSNLPPKSE PAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                 ASAR  GVAEVSPSSSRGTPY ARA+G AEK SGSGR+GRPVGALYF+SR TK+MRRTPG  TTGTA GNADG VVNTGIAFTR TP RSMSARAAGAKHD+S SAVRSASTASVT           TAAERI SRCSSISTMPAAAP  A DDRE  A  A TARLGIPDAVVT+APWKWHQQPGL KLQRP  ST++WASS LMKVALATDASSGSFSAVSSETTSSTSPERHAEAHKKM TETPDGVRIAAXXXXXXXAHTVVWPLPLNAS RAS P GG+RHARLSAR+LAS PSAA+ R EKKEARRTGSGSRR WHHKKRAK+VTET+S     AASAT A GG+PPSSF+WREVGLQGTGS+ EAP         STTN+ GA AAETGKRP LERRTSSSATSRSRYSXXXXXXXXXXXXCSSSFDGNDNQRGAPAATVRSP +F EGNDSNG
Sbjct:   19 GLAYWFNGIGGYDCFAFSTIMGASLSASNAMGFIHLFILSNSMHRANSRWKHFRWFGVIIMVFHWVALVALEGTRTAGKEERGGCAGESRCVTDVDGLALTVKWIMQLLNQMFQTVAFLVPLRMPAAEAANGVRLFSGGLKATGSCRKCLNIS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASSLQRRYSSGPIRRLPPVVDMSPESSGHGSPSRSSSNSCGESPPPAVPSSNLPPKSETPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------ASARXXGVAEVSPSSSRGTPYTARAKGTAEKRSGSGRYGRPVGALYFASRTTKNMRRTPGPSTTGTAMGNADGVVVNTGIAFTRSTPPRSMSARAAGAKHDESTSAVRSASTASVTTGGRGTAAAGGTAAERIQSRCSSISTMPAAAPGPAGDDREPGATVA-TARLGIPDAVVTAAPWKWHQQPGLTKLQRPLWSTDSWASSRLMKVALATDASSGSFSAVSSETTSSTSPERHAEAHKKMPTETPDGVRIAAXXXXXXXAHTVVWPLPLNASTRASRPSGGKRHARLSARALASSPSAAKVRAEKKEARRTGSGSRRNWHHKKRAKKVTETESETLAPAASATAASGGRPPSSFLWREVGLQGTGSHSEAPDAPASAASASTTNDAGAHAAETGKRPRLERRTSSSATSRSRYSXXXXXXXXXXXXCSSSFDGNDNQRGAPAATVRSPPAFYEGNDSNG 770          
BLAST of mRNA_E-fasciculatus_F_contig1599.4100.1 vs. uniprot
Match: A0A6H5JLD8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD8_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 6.440e-21
Identity = 51/60 (85.00%), Postives = 52/60 (86.67%), Query Frame = 0
Query:    9 MPAPGFAALFEVAALSAGLTVAGIVGSRFVVRWHQCSGNADLSAAVSGLAAALLTLFFCL 68
            M APGFAALFEVA L A LTVA IVGSRFVVRWHQCSG ADLSAAVSGLA+ALLTLF  L
Sbjct:    1 MSAPGFAALFEVATLGAALTVASIVGSRFVVRWHQCSGTADLSAAVSGLASALLTLFLSL 60          
BLAST of mRNA_E-fasciculatus_F_contig1599.4100.1 vs. uniprot
Match: A0A835ZIT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIT3_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 3.850e-16
Identity = 81/278 (29.14%), Postives = 127/278 (45.68%), Query Frame = 0
Query:   37 FVVRWHQCSGNADLSAAVSGLAAALLTLFFCLYGLAYWFNGIGGYD--CLAFSTVMGASLSASNALAFIHLFILSNSMHRANSRWKHFRWLGVIIVVFHWVALVALEGTRTAGKEERGGCAGESRCVTDVDSLALTVKWVAQLLNQLFQTVAFLVPL-----------------PR-------------PATGAANDVRLF--SGGLKATGSCRKCLGIPVWQTIISEGL-----SLVMTITVAGIALAKAKGGVDSTPMFAVEVLDNIVNLAAIFYA 275
            F  R  Q S    L    +G  A++LT+F+C+Y L Y++  +   D  C  F  V     +ASNALAF+HLF+ +++++  N  W  +R  G+ ++V   + L+A+  TR+A +  R    GE RC    + ++  +KWV QLL  +  ++ F+ PL                 PR             P+  A  + R    S     TGS R   G  V+Q ++   +     S + TI VA +      G V   P+ A  +LDN   L AI++A
Sbjct:   16 FGARALQGSKRHPLMIHWTGFLASVLTIFYCVYELCYYYVNMASRDAHCAVFK-VWIVMRTASNALAFLHLFLRADAVNAINPNWPPWRRFGIALLVATLIMLIAVAATRSA-RLVRNPPFGE-RCEQSYEPVSFALKWVVQLLCHITFSLMFIYPLVDHMRAVRAAGLAVAHTPRSFLRRVLRRTVQKPSVTATENARAREDSNTAPVTGSMR---GDTVYQRLVRRAVISLVASSLFTIAVAVMVFLDIFGAVSDMPLVAFAILDNGFTLGAIYFA 287          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1599.4100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LTM0_ECTSI0.000e+075.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JF49_9PHAE5.540e-31068.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLD8_9PHAE6.440e-2185.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZIT3_9STRA3.850e-1629.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 121..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..109
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..1012
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..83
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 87..109
NoneNo IPR availableTMHMMTMhelixcoord: 121..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1599contigE-fasciculatus_F_contig1599:3246..12080 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1599.4100.1mRNA_E-fasciculatus_F_contig1599.4100.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1599 3246..12197 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1599.4100.1 ID=prot_E-fasciculatus_F_contig1599.4100.1|Name=mRNA_E-fasciculatus_F_contig1599.4100.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=1013bp
MHRCAAVQMPAPGFAALFEVAALSAGLTVAGIVGSRFVVRWHQCSGNADL
SAAVSGLAAALLTLFFCLYGLAYWFNGIGGYDCLAFSTVMGASLSASNAL
AFIHLFILSNSMHRANSRWKHFRWLGVIIVVFHWVALVALEGTRTAGKEE
RGGCAGESRCVTDVDSLALTVKWVAQLLNQLFQTVAFLVPLPRPATGAAN
DVRLFSGGLKATGSCRKCLGIPVWQTIISEGLSLVMTITVAGIALAKAKG
GVDSTPMFAVEVLDNIVNLAAIFYAVHARPKFFHPRPKSLSQLLDSASSG
NTSSSLMGSFGGNVPFGGNASFGGSRSVGAYRGRRRSESSISADGRGYAE
GGSGRGDIGGLRGSGYGNSSNVGGRLPRPHSIGVTSSTPSFSSFHASSLQ
RRYSSGPIRRLPPVVDMSPESSGHGSPSRSSFNSRGQSPPPAAPSSNLPP
KSEPPAASAAPSAILPLSSGTPSAAAGSLSSLPPSSGTPFAAAGPLSSLR
PASGTPFAAAAPSPSSPPPTRTPSVVAGPSPSSPPLTGTPSVGPGPSPSS
LASARTPGVAEVSPSSSRGTPYPARARGAAEKGSGSGRHGRPVGALYFSS
RATKSMRRTPGSYTTGTASGNADGAVVNTGIAFTRGTPIRSMSARAAGAK
HDDSISAVRSASTASVTTGGGGTAAAGGTAAERIPSRCSSISTMPAAAPE
LASDDREHDAAAAATARLGIPDAVVTSAPWKWHQQPGLAKLQRPFQSTNN
WASSHLMKVALATDASSGSFSAVSSETTSSTSPERHAEAHKKMATETPDG
VRIAAAAAAAAAAHTVVWPLPLNASGRASPPPGGRRHARLSARSLASLPS
AAQGRTEKKEARRTGSGSRRKWHHKKRAKRVTETQSGAPTTAASATVAPG
GKPPSSFVWREVGLQGTGSNPEAPDAPASAASASTTNEVGASAAETGKRP
PLERRTSSSATSRSRYSAAAWSAFSAASWCSSSFDGNDNQRGAPAATVRS
PASFLEGNDSNG*
back to top