mRNA_E-fasciculatus_F_contig1597.4088.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig1597.4088.1
Unique NamemRNA_E-fasciculatus_F_contig1597.4088.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig1597.4088.1 vs. uniprot
Match: D7FKW4_ECTSI (Chloroplast 50S ribosomal protein L15 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKW4_ECTSI)

HSP 1 Score: 450 bits (1157), Expect = 1.150e-159
Identity = 228/232 (98.28%), Postives = 229/232 (98.71%), Query Frame = 1
Query:    1 MKATLATTALFCVGAANAFFAPTAFTGQQLTAGTSAPSRTTTGVTMKIFDWKRRESEDGLVLDRVAVDTLKPAPGSRHRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRTAGKVTKTKHRWHKVVGGMELETSGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLSMDEEEEE 696
            MKATLATTALFCVG ANAFFAPTAFTGQQLTAGTSAPSRTTTGVTMKIFDWKRRESEDGLVLDRVAVDTLKPAPGSR RHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLR AGKVTKTKHRWHKVVGGMELET+GLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLSMDEEEEE
Sbjct:    1 MKATLATTALFCVGVANAFFAPTAFTGQQLTAGTSAPSRTTTGVTMKIFDWKRRESEDGLVLDRVAVDTLKPAPGSRQRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRAAGKVTKTKHRWHKVVGGMELETTGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLSMDEEEEE 232          
BLAST of mRNA_E-fasciculatus_F_contig1597.4088.1 vs. uniprot
Match: A0A835Z4H5_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4H5_9STRA)

HSP 1 Score: 280 bits (717), Expect = 9.070e-93
Identity = 147/227 (64.76%), Postives = 170/227 (74.89%), Query Frame = 1
Query:    1 MKATLATTALFCVGAANAFFAPTAFTGQQLTAGTSAPSRTTTGVTMKIFDWKRRESED-GLVLDRVAVDTLKPAPGSRHRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRTAGKVTKTKHRWHKVVGGMELETSGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLSM 678
            M++ L   A   + A +  F  +AF GQ L A T   S   + ++MKIFDWKRRES+   L +  ++  TL P+PGSRHR  RKGRGI+AGQGASCGFGMRGQ+SRSGPGVRAGFEGGQQPLYRRLPK VGRPMGPGHTKK+F+LI L+ALN   EGATV+FE+L   G +TKT  RWHKVVG  EL   GLTVQAH FT SA EAIE  GGKCQLLSPTTNE++ M
Sbjct:    1 MRSFLYLAACLVIAAVSDAFTASAFHGQALCAATGKAS---SSISMKIFDWKRRESDSFNLAVTELSPATLTPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGATVSFETLHEQGTLTKTSLRWHKVVGNGELNVRGLTVQAHAFTGSAKEAIENAGGKCQLLSPTTNEIVDM 224          
BLAST of mRNA_E-fasciculatus_F_contig1597.4088.1 vs. uniprot
Match: A0A836CHQ3_9STRA (Chloroplast 50S ribosomal protein L15 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHQ3_9STRA)

HSP 1 Score: 270 bits (690), Expect = 1.190e-88
Identity = 139/215 (64.65%), Postives = 162/215 (75.35%), Query Frame = 1
Query:   37 VGAANAFFAPTAFTGQQLTAGTSAPSRTTTGVTMKIFDWKRRESEDG-LVLDRVAVDTLKPAPGSRHRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRTAGKVTKTKHRWHKVVGGMELETSGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLSM 678
            V  A+A+ A +AF GQ +   T   S     V+MKIFDWKRR+ +     +  ++  TL P+PGSRHR  RKGRGI+AGQGASCGFGMRGQ+SRSGPGVRAGFEGGQQPLYRRLPK VGRPMGPGHTKK+F+LI L+ALN   EG+TV+FE+L   G +TKT  +WHKVVG  EL    LTVQAH FT SA EAIE  GGKCQLLSPTTNE++ M
Sbjct:   14 VAVADAWVATSAFNGQAVGTHTCKASN---AVSMKIFDWKRRDDDSANTAVKELSPATLVPSPGSRHRKARKGRGISAGQGASCGFGMRGQRSRSGPGVRAGFEGGQQPLYRRLPKFVGRPMGPGHTKKEFHLITLEALNSAAEGSTVSFETLHEQGTLTKTSLKWHKVVGNGELNVKNLTVQAHAFTGSAKEAIEGAGGKCQLLSPTTNEIVDM 225          
BLAST of mRNA_E-fasciculatus_F_contig1597.4088.1 vs. uniprot
Match: A0A7S1BF06_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BF06_9STRA)

HSP 1 Score: 248 bits (634), Expect = 3.800e-80
Identity = 128/190 (67.37%), Postives = 144/190 (75.79%), Query Frame = 1
Query:  118 TTTGVTMKIFDWKRRESEDGLVLDR----VAVDTLKPAPGSRHRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRTAGKVTKTKHRWHKVVGGM-ELETSGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVL 672
            T TG TMK+FDWKRRE+++  + D       +D LKPAPGSRHR KRKGRGIAAGQGA+CGFGMRGQKSRSG   RAGFEGGQQPLYRRLPK VG+PMGPGH+K  +NLIK D +NG  EG+TV+F SL  AG VTK K+  HKVV G  E    G+TVQAH FT SA  AIE  GGKC+LLSPTT  VL
Sbjct:   33 TATGPTMKVFDWKRREADESAINDAETFVFTLDNLKPAPGSRHRKKRKGRGIAAGQGATCGFGMRGQKSRSGRPTRAGFEGGQQPLYRRLPKFVGKPMGPGHSKTVYNLIKTDEINGAAEGSTVSFGSLFEAGDVTKAKYGIHKVVTGKKEFSAKGVTVQAHAFTNSARAAIEGAGGKCELLSPTTGAVL 222          
BLAST of mRNA_E-fasciculatus_F_contig1597.4088.1 vs. uniprot
Match: A0A7S1BKP2_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BKP2_9STRA)

HSP 1 Score: 248 bits (633), Expect = 5.390e-80
Identity = 128/192 (66.67%), Postives = 146/192 (76.04%), Query Frame = 1
Query:  112 SRTTTGVTMKIFDWKRRESEDGLVLDR----VAVDTLKPAPGSRHRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRTAGKVTKTKHRWHKVVGGM-ELETSGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVL 672
            S +T+ +TMK+FDWKRRE+++  + D       +D LKPAPGSRHR KRKGRGIAAGQGA+CGFGMRGQKSRSG   RAGFEGGQQPLYRRLPK VG+PMGPGH+K  +NLIKLD LNG  EG+TVNF SL  +G +TK+K   HKVV G  E    GL VQAH FT SA  AIE  GGKC+LLSPTT  VL
Sbjct:   31 STSTSSLTMKVFDWKRREADESAINDAENFVFTLDNLKPAPGSRHRKKRKGRGIAAGQGATCGFGMRGQKSRSGRPTRAGFEGGQQPLYRRLPKFVGKPMGPGHSKTVYNLIKLDELNGAAEGSTVNFASLFESGDITKSKVGIHKVVTGKKEFTAKGLIVQAHAFTSSAQTAIEGAGGKCELLSPTTGAVL 222          
BLAST of mRNA_E-fasciculatus_F_contig1597.4088.1 vs. uniprot
Match: A0A7S2K337_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K337_9STRA)

HSP 1 Score: 242 bits (617), Expect = 1.310e-77
Identity = 125/205 (60.98%), Postives = 147/205 (71.71%), Query Frame = 1
Query:   73 FTGQQLTAGTSAPSRTTTGVTMKIFDWKRRESEDGLVLD----RVAVDTLKPAPGSRHRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRTAGKVTKTKHRWHKVVGGMELETSGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLS 675
            F+G QL   TS  S     + MK++DWKRRE+++  + D       +D +KPAPGSR R  RKGRGI+AGQGA+CGFGMRGQK+RSG   R GFEGGQQPLYRRLPK VGRP GPGH K  +N IKL  LNG  EG+TVNF+SL      TK+K+  HK+VGG EL   GLTVQAH FTKSA EAIEA GGKC+LL  TT EV++
Sbjct:   23 FSGNQLQCTTSNQSN----LNMKLYDWKRREADESAINDVENFEFTLDNIKPAPGSRKRFTRKGRGISAGQGATCGFGMRGQKARSGRPTRPGFEGGQQPLYRRLPKFVGRPTGPGHEKTIYNTIKLSELNGAAEGSTVNFDSLFETKATTKSKYSIHKIVGGTELTAKGLTVQAHAFTKSAREAIEASGGKCELLKATTGEVIA 223          
BLAST of mRNA_E-fasciculatus_F_contig1597.4088.1 vs. uniprot
Match: A0A448ZNF8_9STRA (Ribosomal_L18e/L15P domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZNF8_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.230e-75
Identity = 124/206 (60.19%), Postives = 155/206 (75.24%), Query Frame = 1
Query:   73 FTGQQLTAGTSAPSRTTTGVTMKIFDWKRRESEDGLVLD----RVAVDTLKPAPGSRHRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRTAGKVTKTKHRWHKVVGGMELETS-GLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLS 675
            FTG +L A +++ + T   ++MK+ DWKRR +++  + D       +D+L+PAPGSR +  RKGRGI+AGQGA+CGFGMRGQKSRSG   R GFEGGQQPLYRRLPK  GRPMGPGHTKK++NLI+LDALNG+  G+T NFESL  +  VTK+KH  HKVV G E  T+  +TVQAH FTKSA  AIE  GGKC+LL P+T EV++
Sbjct:   21 FTGTRLAAVSTSSANT---LSMKLHDWKRRTADESDINDVENYEFTLDSLRPAPGSRKKKTRKGRGISAGQGATCGFGMRGQKSRSGRPTRPGFEGGQQPLYRRLPKFTGRPMGPGHTKKEYNLIQLDALNGVAPGSTCNFESLFESKAVTKSKHSTHKVVVGREEFTAKDITVQAHAFTKSARAAIEGAGGKCELLKPSTGEVIA 223          
BLAST of mRNA_E-fasciculatus_F_contig1597.4088.1 vs. uniprot
Match: A0A1E7FLQ7_9STRA (Ribosomal protein L15 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLQ7_9STRA)

HSP 1 Score: 236 bits (601), Expect = 5.170e-75
Identity = 117/187 (62.57%), Postives = 143/187 (76.47%), Query Frame = 1
Query:  127 GVTMKIFDWKRRESEDGLVLD----RVAVDTLKPAPGSRHRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRTAGKVTKTKHRWHKVVGGMELETS-GLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVL 672
            G+TMK++DWKRR++++  + D       +D L+PAPGSR    RKGRGIAAGQGA+CGFGMRGQKSRSG   R GFEGGQ PLYRRLPK  GRPMGPGH+KKQ+N+IKLD LN +D G+  NFESL TAG VTK+K+  HK+V G +  T+  +TVQAH FTK+A  AIE  GGKC+LL P+T EV+
Sbjct:   44 GMTMKLYDWKRRDADESAINDVESFEFTLDNLRPAPGSRKSRTRKGRGIAAGQGATCGFGMRGQKSRSGRPTRPGFEGGQTPLYRRLPKFTGRPMGPGHSKKQYNIIKLDQLNNVDSGSVCNFESLFTAGSVTKSKYDTHKIVVGKDDFTAKDITVQAHAFTKTARTAIEDAGGKCELLKPSTGEVI 230          
BLAST of mRNA_E-fasciculatus_F_contig1597.4088.1 vs. uniprot
Match: A0A5J4Z048_PORPP (50S ribosomal protein L15 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z048_PORPP)

HSP 1 Score: 233 bits (594), Expect = 4.310e-74
Identity = 125/223 (56.05%), Postives = 150/223 (67.26%), Query Frame = 1
Query:   25 ALFCVGAANAFFAPTAFTGQQLTAGTSAPSRTTTGVTMKIFDWKRRESE---DGLVLDRVAVDTLKPAPGSRHRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRTAGKVTKTKHRWHKVVGGMELETSGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVLSMDE 684
            A F   + +AFFA        +     A  R     +MK+FDWK+R +E       +  ++V T+ PAPGSR R  RKGRG+AAGQG SCGFGMRGQKSRSG   R GFEGGQ PLYRRLPK VGRPMGPGHTK  +NL+KLD LN   EG  V F++L  +GK+TK K +  K++GG EL    LTV+AH FT SAVEAIEA GGKC LLSPTT E ++M+E
Sbjct:    2 AAFVGASGSAFFAAQRTASVNVAVCGKAGVRRAVAPSMKVFDWKKRGAEAYSGRAEMGEMSVTTVIPAPGSRKRKTRKGRGVAAGQGRSCGFGMRGQKSRSGNPTRPGFEGGQTPLYRRLPKYVGRPMGPGHTKTMYNLVKLDILNKCAEGEVVTFDALVESGKMTKGKFKLAKIMGGAELTVKNLTVKAHAFTSSAVEAIEAAGGKCVLLSPTTGEDINMEE 224          
BLAST of mRNA_E-fasciculatus_F_contig1597.4088.1 vs. uniprot
Match: A0A7S2V549_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V549_9STRA)

HSP 1 Score: 233 bits (593), Expect = 8.450e-74
Identity = 136/230 (59.13%), Postives = 165/230 (71.74%), Query Frame = 1
Query:   28 LFCVGAANAFFAPTAFTGQQLTA--GTSAPSRTTTGVTMKIFDWKRRESEDGLVLDRVAVD--TLKPAPGSRHRHKRKGRGIAAGQGASCGFGMRGQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDALNGLDEGATVNFESLRTAGKVTK----TKHRWH-------KVVGGMELETSGLTVQAHGFTKSAVEAIEAKGGKCQLLSPTTNEVL 672
            L  +GAA AF +P++F GQQL    GTS     T  V+MKI+DWK R+ ++   +D V      L+PAPGS  RHKRKGRGIAAGQGASCGFGMRGQKSRSG  VR GFEGGQ PLYRR+PK+ GRPMGPGH K ++ L++ + L+G++EG+TVNFESLR AGK+ K    TKH+ +       KVVGG +L T GLTVQAH FT SA +AIE  GGKC +LS TTN+ L
Sbjct:    9 LAILGAAVAF-SPSSFGGQQLARVQGTS-----TNTVSMKIYDWKNRQ-KNWKHIDEVEFTHTNLRPAPGSTKRHKRKGRGIAAGQGASCGFGMRGQKSRSGKSVRPGFEGGQTPLYRRIPKIRGRPMGPGHQKIEYALMQFNFLDGVEEGSTVNFESLRAAGKMPKQGKRTKHKRNSGNHQLIKVVGGRDLNTKGLTVQAHAFTASAKKAIEEAGGKCVVLSKTTNKPL 231          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1597.4088.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKW4_ECTSI1.150e-15998.28Chloroplast 50S ribosomal protein L15 n=1 Tax=Ecto... [more]
A0A835Z4H5_9STRA9.070e-9364.76Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
A0A836CHQ3_9STRA1.190e-8864.65Chloroplast 50S ribosomal protein L15 n=1 Tax=Trib... [more]
A0A7S1BF06_9STRA3.800e-8067.37Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S1BKP2_9STRA5.390e-8066.67Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2K337_9STRA1.310e-7760.98Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A448ZNF8_9STRA1.230e-7560.19Ribosomal_L18e/L15P domain-containing protein n=1 ... [more]
A0A1E7FLQ7_9STRA5.170e-7562.57Ribosomal protein L15 n=1 Tax=Fragilariopsis cylin... [more]
A0A5J4Z048_PORPP4.310e-7456.0550S ribosomal protein L15 n=1 Tax=Porphyridium pur... [more]
A0A7S2V549_9STRA8.450e-7459.13Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1597contigE-fasciculatus_F_contig1597:7605..11322 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score451.4
Seed ortholog evalue2.5e-124
Seed eggNOG ortholog2880.D7FKW4
Preferred namePRPL15
KEGG koko:K02876
KEGG Pathwayko03010,map03010
KEGG ModuleM00178,M00179
GOsGO:0000311,GO:0000313,GO:0000315,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009547,GO:0009570,GO:0009719,GO:0009725,GO:0009735,GO:0009941,GO:0009987,GO:0010033,GO:0010467,GO:0015934,GO:0019538,GO:0031967,GO:0031975,GO:0032991,GO:0034641,GO:0034645,GO:0042221,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.structural constituent of ribosome
EggNOG OGsCOG0200@1,KOG0846@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Hectar predicted targeting categorychloroplast
Ec32 ortholog description50S ribosomal protein L15, chloroplast
Ec32 orthologEc-17_001600.1
Exons6
Model size699
Cds size699
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1597.4088.1prot_E-fasciculatus_F_contig1597.4088.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig1597 7605..11322 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928064.9150517-CDS-E-fasciculatus_F_contig1597:7604..76531622928064.9150517-CDS-E-fasciculatus_F_contig1597:7604..7653Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 7605..7653 +
1695995808.586885-CDS-E-fasciculatus_F_contig1597:7604..76531695995808.586885-CDS-E-fasciculatus_F_contig1597:7604..7653Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 7605..7653 +
1622928065.0560553-CDS-E-fasciculatus_F_contig1597:7964..80961622928065.0560553-CDS-E-fasciculatus_F_contig1597:7964..8096Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 7965..8096 +
1695995808.6017992-CDS-E-fasciculatus_F_contig1597:7964..80961695995808.6017992-CDS-E-fasciculatus_F_contig1597:7964..8096Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 7965..8096 +
1622928065.0711594-CDS-E-fasciculatus_F_contig1597:8878..91171622928065.0711594-CDS-E-fasciculatus_F_contig1597:8878..9117Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 8879..9117 +
1695995808.6104038-CDS-E-fasciculatus_F_contig1597:8878..91171695995808.6104038-CDS-E-fasciculatus_F_contig1597:8878..9117Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 8879..9117 +
1622928065.0883114-CDS-E-fasciculatus_F_contig1597:9642..97241622928065.0883114-CDS-E-fasciculatus_F_contig1597:9642..9724Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 9643..9724 +
1695995808.6194685-CDS-E-fasciculatus_F_contig1597:9642..97241695995808.6194685-CDS-E-fasciculatus_F_contig1597:9642..9724Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 9643..9724 +
1622928065.10661-CDS-E-fasciculatus_F_contig1597:10903..109831622928065.10661-CDS-E-fasciculatus_F_contig1597:10903..10983Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 10904..10983 +
1695995808.6289062-CDS-E-fasciculatus_F_contig1597:10903..109831695995808.6289062-CDS-E-fasciculatus_F_contig1597:10903..10983Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 10904..10983 +
1622928065.118207-CDS-E-fasciculatus_F_contig1597:11205..113221622928065.118207-CDS-E-fasciculatus_F_contig1597:11205..11322Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 11206..11322 +
1695995808.6394112-CDS-E-fasciculatus_F_contig1597:11205..113221695995808.6394112-CDS-E-fasciculatus_F_contig1597:11205..11322Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig1597 11206..11322 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig1597.4088.1

>prot_E-fasciculatus_F_contig1597.4088.1 ID=prot_E-fasciculatus_F_contig1597.4088.1|Name=mRNA_E-fasciculatus_F_contig1597.4088.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=233bp
MKATLATTALFCVGAANAFFAPTAFTGQQLTAGTSAPSRTTTGVTMKIFD
WKRRESEDGLVLDRVAVDTLKPAPGSRHRHKRKGRGIAAGQGASCGFGMR
GQKSRSGPGVRAGFEGGQQPLYRRLPKLVGRPMGPGHTKKQFNLIKLDAL
NGLDEGATVNFESLRTAGKVTKTKHRWHKVVGGMELETSGLTVQAHGFTK
SAVEAIEAKGGKCQLLSPTTNEVLSMDEEEEE*
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mRNA from alignment at E-fasciculatus_F_contig1597:7605..11322+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig1597.4088.1 ID=mRNA_E-fasciculatus_F_contig1597.4088.1|Name=mRNA_E-fasciculatus_F_contig1597.4088.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3718bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1597:7605..11322+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGGCTACTCTTGCGACGACCGCGCTCTTTTGCGTGGGGGCAGCGAG TGAGTAGTGCGTGATTTTTTGTGTTACCGCTTGGAGCGTCAGCTCGCCGA TTGAGTTTGACGTGCAGGACCACCCGACAGCCTTGAAGACGCATGTCGTT CTCTGCCCCACCCTCTTACCTCTCGGCTCCGCCGATCGTATCGATTGCAG TTTGGTCCATCTTGGTAAGAGATGGCCATCCAGTGCGATATTTTAGCGTG TTGTGCTTTTTGAAAGCTCGTAGCAGCTACAACGACGTGTGTGCGGCAGC GGGTGACTCACAAACACACCACATGTGTGATTTGCATGAACCCTTCCACC GGCGGAACAGATGCGTTCTTCGCTCCCACTGCCTTCACCGGTCAGCAACT GACAGCGGGGACTAGTGCACCATCGCGCACGACGACGGGTGTGACCATGA AAATCTTCGACTGGAAAAGAAGAGAAAGCGAGGACGGCCTAGGTAAGCGC TTGCGTCTGCCTCGCGATCGTATAAAAAAGGCGTGGCAGTAACCGACCCT CTTTGTCCAACTTTGTATTTGTATGATGTTGTACATACATGTAAACGACC GCTGTGTGCATGCAGTTGGTTTTGCTCTGAAGTCTACAGCAGTAGAGACC GCACACTCAAGTCGTTGGTCGCGGTAGCTCAAAGTATGGCGCTTCATCGA GCAAGGTACCATTATCGTGCTTGAACAGAAACCTAGTTTCGTATTCCTGA ATGTACACAGCATCAACCTGCTCGACATCAATTTGGCCGTACTCTACATT AGCTTGTACGGCGTGGTAGCTTTGTTAAAACGTGTCCTGCTTTGTAATAC CGGGGCTCGCAAAATGAAGGCCAACACCGGTTCCCCGGGGGTGGTTTGCA CTATCAACGTTGGGGATTAACCTAGAGTCGATACGGCACCCACTGCCGGA CACTTGTCGGAAATATCCGCGGCAATATTCGCGCTTGCCGCGTACAAGGT AGTGTTCAACTGCAGATTTGGATGAAGCGACACAGCAATTTGGGACCAAT TTTTTTAGTCAACCTACGCAGACAGCAGGTAGGCTTAAGCGCTCAATCAC AGCAGTACAAGTAGCTTCGGAGACAAAAAACTACGTCGTGTTTTATTTCT GTGGATTTGTGGCTTGTGGAACATGTACATATGCATAGTCGCATCGCTGA TGTTCCACGGCTACTCACTTTCTTGGACGGAATGACATCTCGTTCGTTTC CGTTGGGTTGTTTCGCGGCGCCAGTTCTTGACAGGGTCGCTGTGGACACC CTCAAGCCTGCACCGGGCTCGCGCCACCGCCACAAGCGGAAGGGTCGCGG TATTGCTGCCGGACAGGGGGCATCATGCGGCTTCGGTATGCGAGGGCAAA AGTCTCGTTCCGGTCCTGGAGTGCGGGCAGGATTCGAGGGTGGGCAGCAG CCTCTTTACCGCCGCCTACCCAAGCTAGTTGGCCGCCCCATGGGCCCCGG CCACACCAAGAAGGTTGGTAGGGTGAACTGGCTGTTTGTGGATGAAATCT TGCGGTAATTGAACGTGAGAGTGTGACTGCCGAGAGGTTGGGAGTGCATC ACGGCAAATGCCACACTGACAACAGTTCATTGCGGCCGAGGTGCCGATAC GATGGTCTTAAGGTTGTGTTTCTGTCAGGTTGGGAGTGTGCATGGCAACG GCATTCCGCCCAAGCCCGTCACACGAAAGTGTAGAAGACCACGTTATTGT GTCATGTAGCTCCTTAGGAATCCGGAAAAAGTCGTCAACAGTTTTCGTGG ATGGTACGGAGGTCAAGCCCCAATTGACCAACAAAAATCGGGGGTGATTG TGCTTGATCAAATGGGCTCCACCTGAAACTCCGAGACCGCCATCTGTCTT GGACCCACATGCTCCTGTTCGCAAGTACTGTAGATATGACGGCAACTGCC CTGTCTGTGGGCCTGCTTGTAGTGGACCCTCTCGTTGTCACCCACTGAGC AATCCCCCCCTTCCCCCCCACGTCCTCCCCTGCAATAGCAATTCAACCTC ATTAAGCTGGACGCCCTCAATGGACTGGATGAAGGTGCCACCGTTAACTT CGAATCTCTTCGTACGGCCGGTGAGTCATGTTGCAATTACTGCGCCCTCG GTGTACCTCTCAACCGTGTTGCAAGTGCGGTGCCAAGTCTTGGTCGAATT TTACGAAACTGAGTATCTGCTTAGGCCTGCNNNNNNNNNNGGGGGGGGGG GGGGGGCACGGCGTATGCAACAGCGCCATTTGAGGGCCCTGTACGCTTTG ACAAGTTGCTTACAAAATGATACGGACTATCCAAATCTGCTCAGAGTCAC CTGACGCAGTTTTTGAGTGTCGTGCTTCACAATTACAGCACCCCCCGACG TTAGTCTCCTCTTTCTCCGCTGATATTGCTGTGATCTGATGCAGGGTTGG TTCAAAAACGCCTCACCAGGTTTGAGTCCAATACGTGGAGGGCGGACAGA GTAGAGAGCTTCCGAGTACATGTGCTCAGATCAAAACATTGTTCCTACTC TTCTTAGAACACCGTATTTCCAGTGCTAAAACCTACTCTACATCCCAACG CAGACATCGGGTGCCATCTGTGGTCCGTGTGCTTGCCTTGTATGAGCGGA AGTCGCGACTCTTTGCTCTTGTTTCTGTTTCTCTTTACTCAAAACACACA CATGCTTTACTTTTGGCAACAGAATCAGGGATGCAGTTGAGATGCAGACT GGAGGGTCCCACGCACATTTATGCTCACCGAAATGAAAATGTGCTTCACC GCAATCCTAACCCTAGCTCCCGGGCCGGTTAAGCCCCGTGACTGCCAGGG TCTGAAGAGATTGAGATTGTGGATACAGTTACCAGTAAAAGTATGCCGAT AGAGAGAGCAAAAAGAGATCCGGCATCCAACGCGCAACCATGACGTCAGG TGATGAAGGCCATTAAATCCCGCACTGATGAAACTGCTCCAACGTGTCGT GTGACTGTTCGGTCTTCCTCTCGCTCAGTTATTACCTATCTTTTCCCTCA GTTGCTGCGCCTGCCATAGTTGTATCACCTTGCGTCGTGAAGATCAATCA TTGTCTTCCTCTTGGGTACAACAGCAGTCGAGGCGTCCACCCTGAACCAA CCAACTATCCACAACAGTGCAGATATTGGTGATGTGGAAAGGACGGTTTA GGGTGGGCACGTCCCCGACACGACCAATAAACGGACAGCCGTAGGCGGAA TGATGTGCTCACGGCATGCGCTGTACTCTGCCCGAAAATACAATGTCAGG TAAAGTCACCAAGACCAAGCACAGGTGGCACAAGGTTGTGGGTGGAATGG AGCTGGAAACATCAGGGCTTACAGTACAGGTGCGAGGAACACTTTGGGTA CGTTGGTGCCAGTAATTTTGTTCTCCAGGTATTTGCTCCCGTAACATTCA AGGCAGCATGTACGTTCAAGATGAATCGGAGTTGCGAAAGGCGAACGCGG GCTCCAGTGTTGCGATAGTTCCTTGACGTATCGCGCGGGGGGAGTTGACC ATGCCACCGGAACACGTTTTTGTCCGTCTCTCCTTCTATTCCGTGCCGCA GGCCCACGGGTTCACGAAGAGCGCCGTTGAGGCGATAGAGGCGAAGGGCG GGAAGTGCCAACTGCTTTCCCCGACGACGAATGAAGTTTTGTCGATGGAC GAGGAGGAGGAAGAGTAA
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1597:7605..11322+

>mRNA_E-fasciculatus_F_contig1597.4088.1 ID=mRNA_E-fasciculatus_F_contig1597.4088.1|Name=mRNA_E-fasciculatus_F_contig1597.4088.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1398bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1597:7605..11322+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAAGGCTACTCTTGCGACGACCGCGCTCTTTTGCGTGGGGGCAGCGAA
TGAAGGCTACTCTTGCGACGACCGCGCTCTTTTGCGTGGGGGCAGCGAAT
GCGTTCTTCGCTCCCACTGCCTTCACCGGTCAGCAACTGACAGCGGGGAC
TAGTGCACCATCGCGCACGACGACGGGTGTGACCATGAAAATCTTCGACT
GGAAAAGAAGAGAAAGCGAGGACGGCCTAGATGCGTTCTTCGCTCCCACT
GCCTTCACCGGTCAGCAACTGACAGCGGGGACTAGTGCACCATCGCGCAC
GACGACGGGTGTGACCATGAAAATCTTCGACTGGAAAAGAAGAGAAAGCG
AGGACGGCCTAGTTCTTGACAGGGTCGCTGTGGACACCCTCAAGCCTGCA
CCGGGCTCGCGCCACCGCCACAAGCGGAAGGGTCGCGGTATTGCTGCCGG
ACAGGGGGCATCATGCGGCTTCGGTATGCGAGGGCAAAAGTCTCGTTCCG
GTCCTGGAGTGCGGGCAGGATTCGAGGGTGGGCAGCAGCCTCTTTACCGC
CGCCTACCCAAGCTAGTTGGCCGCCCCATGGGCCCCGGCCACACCAAGAA
GTTCTTGACAGGGTCGCTGTGGACACCCTCAAGCCTGCACCGGGCTCGCG
CCACCGCCACAAGCGGAAGGGTCGCGGTATTGCTGCCGGACAGGGGGCAT
CATGCGGCTTCGGTATGCGAGGGCAAAAGTCTCGTTCCGGTCCTGGAGTG
CGGGCAGGATTCGAGGGTGGGCAGCAGCCTCTTTACCGCCGCCTACCCAA
GCTAGTTGGCCGCCCCATGGGCCCCGGCCACACCAAGAAGCAATTCAACC
TCATTAAGCTGGACGCCCTCAATGGACTGGATGAAGGTGCCACCGTTAAC
TTCGAATCTCTTCGTACGGCCGCAATTCAACCTCATTAAGCTGGACGCCC
TCAATGGACTGGATGAAGGTGCCACCGTTAACTTCGAATCTCTTCGTACG
GCCGGTAAAGTCACCAAGACCAAGCACAGGTGGCACAAGGTTGTGGGTGG
AATGGAGCTGGAAACATCAGGGCTTACAGTACAGGTAAAGTCACCAAGAC
CAAGCACAGGTGGCACAAGGTTGTGGGTGGAATGGAGCTGGAAACATCAG
GGCTTACAGTACAGGCCCACGGGTTCACGAAGAGCGCCGTTGAGGCGATA
GAGGCGAAGGGCGGGAAGTGCCAACTGCTTTCCCCGACGACGAATGAAGT
TTTGTCGATGGACGAGGAGGAGGAAGAGTAAGCCCACGGGTTCACGAAGA
GCGCCGTTGAGGCGATAGAGGCGAAGGGCGGGAAGTGCCAACTGCTTTCC
CCGACGACGAATGAAGTTTTGTCGATGGACGAGGAGGAGGAAGAGTAA
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