mRNA_E-fasciculatus_F_contig10500.404.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig10500.404.1
Unique NamemRNA_E-fasciculatus_F_contig10500.404.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: D7FVM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM1_ECTSI)

HSP 1 Score: 453 bits (1166), Expect = 6.900e-150
Identity = 258/304 (84.87%), Postives = 265/304 (87.17%), Query Frame = 1
Query:  328 QAVDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKA-SPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALREEWGG-----RRGALGPFVGGDRGVGRREGVLIITRKHFEAALASTQPSSGTETAAKHERWARQWHVGS 1221
            +AVDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARR VADTADGKDS GDNDGPAP  QGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGR+QIL ASK+RMEGLSTTAAAA                    SPVHPD SSSTGGSGSRP GGG RGGRWA+DVDLLWL+RQT+GYSGADLSSLVRNAAMVALREE GG     RRGAL  FVGG RG GR+EGVLIITRKHFEAALASTQPSSGTET AKHERWARQWHVGS
Sbjct:  344 KAVDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRSVADTADGKDSAGDNDGPAPVAQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRRQILRASKSRMEGLSTTAAAAXXXXXXXXXXXXXXXXXXXXSPVHPDRSSSTGGSGSRPVGGGSRGGRWASDVDLLWLSRQTKGYSGADLSSLVRNAAMVALREEGGGXXXXXRRGALSSFVGGGRGTGRKEGVLIITRKHFEAALASTQPSSGTETEAKHERWARQWHVGS 647          
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: A0A6H5JGW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW6_9PHAE)

HSP 1 Score: 452 bits (1162), Expect = 7.190e-142
Identity = 262/345 (75.94%), Postives = 270/345 (78.26%), Query Frame = 1
Query:  328 QAVDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTA------------------------------------------TAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALREEWGGR-----RGALGPFVGGDRGVGRREGVLIITRKHFEAALASTQPSSGTETAAKHERWARQWHVGS 1221
            + +DQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARR VADTADGKDS GDN+GP  A QGXXXXXXXX ANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGR+QILGASKARMEGLSTTAAAATGA  A                                          TAAV T DERG  SP HPD SSSTGGSGSRP GGG RGGRWA+DVDLLWL+RQT+GYSGADLSSLVRNAAMVA REE G        GA   FVGG RG GR+EGVLIITRKHFEAALAST PSSGTETAAKHERWARQWHVGS
Sbjct: 1013 KVIDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRSVADTADGKDSAGDNNGPTRAAQGXXXXXXXXSANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRRQILGASKARMEGLSTTAAAATGAMVAEAPPSTQLSPPDDFDTRVLVAAQEVKTSPPTVDSSAGASTATTAAVPTNDERGSGSPAHPDRSSSTGGSGSRPVGGGSRGGRWASDVDLLWLSRQTKGYSGADLSSLVRNAAMVAFREEGGXXCRXXXXGASSSFVGGGRGTGRKEGVLIITRKHFEAALASTHPSSGTETAAKHERWARQWHVGS 1357          
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: W7T2R5_9STRA (Cell division control protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2R5_9STRA)

HSP 1 Score: 120 bits (302), Expect = 4.080e-25
Identity = 101/301 (33.55%), Postives = 133/301 (44.19%), Query Frame = 1
Query:  340 QAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALREE----W---GGRRGALGPFVGGDRGVGRREGVLIITRKHFEAALASTQPSSGTETAAKHERWARQWHVGS 1221
            +AFR A+E  P ++FIDEFQALF++R        RLASQLL+ MD L R        V + A G                           V VLAATNAPEA+D+AFLRPGRFD +VY GLPD   R  IL   + RM                                                       RWA D+ +  LA QTEG+SGADL++L+R AA+ AL       W   GGR G        +  V     + +I R+  +AAL + + ++  E+ +K E + R+ H GS
Sbjct:  577 EAFRVAQENRPVVIFIDEFQALFSAR-GXXXXXXRLASQLLLSMDALRR-EHGREGEVGEEAAGF--------------------------VSVLAATNAPEAIDSAFLRPGRFDRLVYVGLPDQQDRADILDRWRERM-------------------------------------------------------RWAEDMGVTELAEQTEGFSGADLANLMRRAALHALAAHKSPPWPDGGGRDGRASQGGSSEAAVP----LPLIRREDVQAALRTCRATTSPESLSKFEAY-RRLHGGS 789          
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: A0A835ZEI6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI6_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.200e-23
Identity = 92/260 (35.38%), Postives = 112/260 (43.08%), Query Frame = 1
Query:  328 QAVDQAFRTARELAPSIVFIDEFQ------------------------ALFASREAG--GGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALR 1029
            +AV +AF  ARELAP+IVFIDEF+                        ALFA R AG  G  GSRLASQLL+ MDELA WRA                                          LAATN+PE++D AFLRPGRFDE++YAGLP A  R+ +L A++A        AAAA GA                                           W   VD   +AR+  G+SGAD++ LVR AA   L+
Sbjct:  483 RAVARAFAAARELAPAIVFIDEFESFTARERALVLRGASAHVARPAPPALFADRAAGDGGAVGSRLASQLLLSMDELAAWRARRGXXXXXXX----------------------------XXXXLAATNSPESIDPAFLRPGRFDEVIYAGLPTAAARRAMLEAARA--------AAAAAGAP------------------------------------------WHGGVDAAAVARRAHGFSGADVAGLVRGAAAATLQ 664          
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: A0A7S2A2S2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A2S2_TRICV)

HSP 1 Score: 96.7 bits (239), Expect = 3.180e-20
Identity = 61/134 (45.52%), Postives = 70/134 (52.24%), Query Frame = 1
Query:  355 ARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARM 756
            AR  APS+VFIDEFQALF  R  G G   RLAS LL C+D+ ARWR A     A    G    G                      V+VL ATNAP  VD AFLRPGRFD +V+ GLP    R+ +L    +RM
Sbjct:    1 ARRNAPSVVFIDEFQALFTERGRGSG---RLASVLLQCLDDAARWREADAGAGASGKGGGRKNGSE------------------RRVVVLGATNAPWMVDRAFLRPGRFDRVVHVGLPTEGEREAVLSVHTSRM 113          
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: A0A830HVK1_9CHLO (Uncharacterized protein n=4 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HVK1_9CHLO)

HSP 1 Score: 102 bits (255), Expect = 1.940e-19
Identity = 92/292 (31.51%), Postives = 117/292 (40.07%), Query Frame = 1
Query:  343 AFRTARELAPSIVFIDEFQAL--FASREAGGG----TGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALREEWGGRRGALGPFVGGDRGVGRREGVLIITRKHFEAALASTQPSSGTETAAKHERWA 1200
            AFR ARE AP I+ IDE  A+   A  ++GGG     G RL + LL  MD L +   A                                       +VLA TN P+AVDAA LR GR DE+VY GLPD +GR Q L A  A                                 V  DG                       DVD+  +A ++EG++GAD++SLVR AAM AL +                      + V+ +  KHF  ALA T+PS   E  A++ERWA
Sbjct:  403 AFRRAREAAPCILLIDEIDAVGGAARTKSGGGGAPGAGERLLTTLLAEMDGLGQHEGA---------------------------------------IVLACTNRPDAVDAALLRAGRCDEVVYVGLPDQEGRLQALLAHTAN--------------------------------VAIDG-----------------------DVDMRDVASRSEGFTGADIASLVRQAAMCALDDA---------------------DEVVAVNCKHFHKALALTRPSVDDEDIARYERWA 579          
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: A0A7C3N4E2_9ARCH (AAA family ATPase n=5 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7C3N4E2_9ARCH)

HSP 1 Score: 102 bits (253), Expect = 4.730e-19
Identity = 84/285 (29.47%), Postives = 118/285 (41.40%), Query Frame = 1
Query:  328 QAVDQAFRTARELAPSIVFIDEFQALFASREAG---GGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALREEWGGRRGALGPFVGGDRGVGRREGVLIITRKHFEAALASTQPSSGTE 1173
            +A+ + FR A++ APSI+F DE  A+   R  G    G   R+ SQLL  MD +   R                                        V+V+AATN P+ VD A LRPGRFD+++Y  LPD D R++IL   K  +                                             +P          A D+D+  LAR+TEGY+GADL+++   A M+A+RE   G +GA       D+  G +   L + R+HFE AL   +P S  E
Sbjct:  535 RAIREVFRRAKQAAPSIIFFDEIDAIAPIRGGGYGDSGVTERVISQLLTEMDGIEELRG---------------------------------------VVVIAATNRPDIVDPALLRPGRFDKLLYVPLPDFDARKEIL---KIHLR-------------------------------------------KKPL---------AEDIDVDELARRTEGYTGADLAAICNTAVMLAIREHIMGNKGA-------DK-TGEKLRELKVYRRHFEEALKKVKPMSQRE 717          
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: I2CRR6_NANGC (AAA_lid_3 domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRR6_NANGC)

HSP 1 Score: 94.0 bits (232), Expect = 1.030e-18
Identity = 71/210 (33.81%), Postives = 95/210 (45.24%), Query Frame = 1
Query:  613 VMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALREE----W---GGRRGALGPFVGGDRGVGRREGVLIITRKHFEAALASTQPSSGTETAAKHERWARQWHVGS 1221
            V VLAATNAPEA+D+AFLRPGRFD +VY GLPD   R  IL   + RM                                                       RWA D+ +  LA QTEG+SGADL++L+R AA+ AL       W   GGR G        +  V     + +I R+  +AAL + + ++  E+ +K E + R+ H GS
Sbjct:   22 VSVLAATNAPEAIDSAFLRPGRFDRLVYVGLPDQQDRADILDRWRERM-------------------------------------------------------RWAEDMGVAELAEQTEGFSGADLANLMRRAALHALAAHKSPPWPDGGGRDGRASQGGSSEAAVP----LPLIRREDVQAALRTCRATTSPESLSKFEAY-RRLHGGS 171          
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: V9EMF2_PHYPR (Uncharacterized protein (Fragment) n=18 Tax=Phytophthora TaxID=4783 RepID=V9EMF2_PHYPR)

HSP 1 Score: 99.4 bits (246), Expect = 3.430e-18
Identity = 71/234 (30.34%), Postives = 103/234 (44.02%), Query Frame = 1
Query:  328 QAVDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALR 1029
            +A+ +AF TAR L+P ++FIDEFQ+LF SR   G T SR+ SQLL+ +D L      ++   +D A G+                          + VLAATNA  A+D AFL+PGRF+ +VY GLP+A+ R  IL     +M                                                        W+ DV+L  L  +TEG + A L +L ++AA+ A++
Sbjct:  541 KAITRAFDTARALSPCMIFIDEFQSLFGSRSTAGQTTSRMISQLLMELDALKAVSDDSKAHASDVAAGR--------------------------IFVLAATNALSAIDPAFLQPGRFENVVYVGLPNANERNAILEIQCNKMP-------------------------------------------------------WSQDVELTKLVLETEGANAASLIALCQSAAIQAMQ 693          
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: A0A6A4FQM9_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FQM9_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.480e-18
Identity = 74/234 (31.62%), Postives = 106/234 (45.30%), Query Frame = 1
Query:  328 QAVDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALR 1029
            +A+ +AF TAR L+P ++FIDEFQ+LF +R   G T SR+ SQLL+ +D L        + V+D     DS    D  A +  G           + VLAATNA  A+D AFL+PGRF+ +VY GLP+A+ R+ IL   + +M                                                        W  DVDL  L  +T G + A L +L ++AA+ A++
Sbjct:  544 KAITRAFDTARALSPCMIFIDEFQSLFGNRSTAGQTTSRMISQLLMELDAL--------KAVSD-----DSEVYGDAAASSTVGNISTG-----RIFVLAATNALSAIDPAFLQPGRFENVVYVGLPNANERKSILEIQRRKMP-------------------------------------------------------WNQDVDLARLVEETNGANAASLIALCQSAAIQAMQ 704          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVM1_ECTSI6.900e-15084.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGW6_9PHAE7.190e-14275.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7T2R5_9STRA4.080e-2533.55Cell division control protein n=3 Tax=Monodopsidac... [more]
A0A835ZEI6_9STRA4.200e-2335.38P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2A2S2_TRICV3.180e-2045.52Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A830HVK1_9CHLO1.940e-1931.51Uncharacterized protein n=4 Tax=Pycnococcus provas... [more]
A0A7C3N4E2_9ARCH4.730e-1929.47AAA family ATPase n=5 Tax=Candidatus Bathyarchaeot... [more]
I2CRR6_NANGC1.030e-1833.81AAA_lid_3 domain-containing protein n=1 Tax=Nannoc... [more]
V9EMF2_PHYPR3.430e-1830.34Uncharacterized protein (Fragment) n=18 Tax=Phytop... [more]
A0A6A4FQM9_9STRA3.480e-1831.62Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10500contigE-fasciculatus_F_contig10500:191..3227 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score454.5
Seed ortholog evalue4.7e-125
Seed eggNOG ortholog2880.D7FVM1
KEGG koko:K14571
KEGG Pathwayko03008,map03008
EggNOG free text desc.preribosome binding
EggNOG OGsCOG0464@1,KOG0733@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-01_009400.3
Exons4
Model size1631
Cds size1122
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10500.404.1prot_E-fasciculatus_F_contig10500.404.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig10500 293..2820 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927548.5345654-UTR-E-fasciculatus_F_contig10500:190..2921622927548.5345654-UTR-E-fasciculatus_F_contig10500:190..292Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10500 191..292 +
1695995589.7583013-UTR-E-fasciculatus_F_contig10500:190..2921695995589.7583013-UTR-E-fasciculatus_F_contig10500:190..292Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10500 191..292 +
1622927548.6076155-UTR-E-fasciculatus_F_contig10500:2820..32271622927548.6076155-UTR-E-fasciculatus_F_contig10500:2820..3227Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10500 2821..3227 +
1695995589.8175738-UTR-E-fasciculatus_F_contig10500:2820..32271695995589.8175738-UTR-E-fasciculatus_F_contig10500:2820..3227Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleUTRE-fasciculatus_F_contig10500 2821..3227 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927548.5469997-CDS-E-fasciculatus_F_contig10500:292..6271622927548.5469997-CDS-E-fasciculatus_F_contig10500:292..627Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10500 293..627 +
1695995589.7789955-CDS-E-fasciculatus_F_contig10500:292..6271695995589.7789955-CDS-E-fasciculatus_F_contig10500:292..627Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10500 293..627 +
1622927548.5630622-CDS-E-fasciculatus_F_contig10500:1089..13391622927548.5630622-CDS-E-fasciculatus_F_contig10500:1089..1339Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10500 1090..1339 +
1695995589.789924-CDS-E-fasciculatus_F_contig10500:1089..13391695995589.789924-CDS-E-fasciculatus_F_contig10500:1089..1339Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10500 1090..1339 +
1622927548.5779822-CDS-E-fasciculatus_F_contig10500:2154..22571622927548.5779822-CDS-E-fasciculatus_F_contig10500:2154..2257Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10500 2155..2257 +
1695995589.8009417-CDS-E-fasciculatus_F_contig10500:2154..22571695995589.8009417-CDS-E-fasciculatus_F_contig10500:2154..2257Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10500 2155..2257 +
1622927548.5923717-CDS-E-fasciculatus_F_contig10500:2386..28201622927548.5923717-CDS-E-fasciculatus_F_contig10500:2386..2820Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10500 2387..2820 +
1695995589.8094413-CDS-E-fasciculatus_F_contig10500:2386..28201695995589.8094413-CDS-E-fasciculatus_F_contig10500:2386..2820Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig10500 2387..2820 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig10500.404.1

>prot_E-fasciculatus_F_contig10500.404.1 ID=prot_E-fasciculatus_F_contig10500.404.1|Name=mRNA_E-fasciculatus_F_contig10500.404.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=374bp
MENMSSAPVHGLSQSEVDASLAHRPPRSSRRSGWKKKLRMVACFFFSSFV
QCSLVLTCDALAWLSGGHHHHDFYCQAVDQAFRTARELAPSIVFIDEFQA
LFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDN
DGPAPAVQGGGEGGGGGSANVMVLAATNAPEAVDAAFLRPGRFDEIVYAG
LPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPV
HPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLV
RNAAMVALREEWGGRRGALGPFVGGDRGVGRREGVLIITRKHFEAALAST
QPSSGTETAAKHERWARQWHVGS*
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mRNA from alignment at E-fasciculatus_F_contig10500:191..3227+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig10500.404.1 ID=mRNA_E-fasciculatus_F_contig10500.404.1|Name=mRNA_E-fasciculatus_F_contig10500.404.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3037bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10500:191..3227+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ACCACTTGTTTTTGCTGTTTCTTGTGTTGTTACCGTCTCTGACCCTCGTC ACCCCGGCGGTTCCCCCCGCGACGGCATGTTGTACCCGTGCTGATCCTCG AGATGGAGAACATGAGCTCCGCGCCAGTCCACGGGCTGAGCCAGAGTGAA GTGGATGCTTCTCTCGCACACCGTCCTCCTCGGAGCAGTAGGCGCTCAGG ATGGAAGAAAAAACTCAGGATGGTAGCTTGCTTTTTTTTCTCATCCTTTG TACAATGTTCTCTTGTTCTAACGTGTGACGCTCTTGCGTGGCTGAGTGGC GGACATCACCACCATGATTTTTACTGTCAGGCCGTCGACCAGGCATTTCG CACGGCGCGAGAGCTAGCACCGTCCATCGTATTCATCGACGAGTTTCAGG CGCTCTTCGCTTCCAGAGAGGCGGGGGGGGGGACAGGGTGAGGGCGATGC ACGAAACGTGCAAAAAACTGGAAGTTGGCTGCTGGTAGTTTTTTTTCGCG TCGTTTTGTATCGTCTCTGTGTGCTGTTAGTTGTTTTTCGGTTCTTTTAC GTCAATTGAGCATAAACTGCGGTGCTTTCGAAAGACGGGCATCACAGTGC AAAGTAGCATGGGGTAGGCACCGTGCGGGGTAGAAGTAGTCGCGGCATCA GGCAAACGTGGACTGAAGGGCACCAAGGGCACCAAGGGGAACATAGGCAG GGAGGCAAAGACTGCAGAGACAAACAGGACAGTTTCACACCTTTGGACAG AGCGACCTTTCCAAAGGAAGACGGGCGTATCTCCCGCAAGCTTACGGCGT TGGTCGAGCGTGAAGGAAATCGACAGCATGCACACCAATTGCCGTTCCGT ATGACGCGACACCCCCCCCGCCATGCCCCCCCGCGCGACGCACGAGCAGC TCGCGCCTCGCGTCCCAGCTGCTTGTGTGCATGGACGAGCTGGCTCGCTG GAGAGCCGCCGCTAGGCGGCGCGTTGCCGACACGGCCGATGGAAAAGATA GCACCGGCGACAACGACGGCCCCGCGCCGGCGGTGCAAGGCGGCGGGGAA GGGGGAGGGGGAGGCAGCGCGAACGTTATGGTGCTGGCTGCCACCAACGC CCCGGAGGCGGTCGACGCCGCGTTCTTGCGGCCGGGCCGTTTCGACGAGG TGAGGGACTGACTACACCTTGCGGCAGCTGTGTGTGCCGGGTCGTCGCAA TACGACGGGAGAGCTTATACGAACGTACCAATGAAAGCGCGACAGACGGC AAGCACGCGTTTTGCTTACACGGGGACGGGGCGGCGGTGGGGGGGGGAGT TGACTTTGCTCAAGGTAGACAAGGTGTTGCGGGGGAGGTTCAAGCCAAGG GCGTTGTCGATGTTAACGTGTTGCGTTTGCACGATTCAAGCCAAGGGCGT TGTCGATGTTACCGTGTTGCTTTTGCACGATGGCACACCGTGTGCGACGT ACCTCACCGCCCCCTCCGGAGCAGTCTCGAGACGAAGCTCGATGTTGCTC CAAACGACAAGAAAAGAGAGCGGACGTCAACGTCAGCCAATGATTATTAT TATTTGGACATCTCTTGGGGAGACTTTTGCGAAGCCACCCACGTTGGCGG CGACACCCTTCCTGTCGTGGAGCAATCGAGCTCATGGACATGGGTTTACT GCTGTAGTGTATTTGTGCGACGTAGTATGTCATAGCAGGTTCTAGGGAGA GCGGCGGACAAGCACGCCGAAGACGGTGTGCGGGGCTCCCATGTGCCGCT CGACTCCACCGCTTTCACGACCGAAAAAACGGAACCTCTAAATAGCCGTG CTCGTTGTCAACCGCCGTCTCTCCCCGGCGCATCAACGCCTACATTCCTC GTGTGAGCTCTAACGGACGCAGCATGCTAAAATTGTCCCTTCCTCGGTCG GAAAAACAAAACAACAACGTATGCCCGCTTCTGGTTGCTTTATGTCCACG TGCTTTTTTCACAGATCGTGTATGCAGGTCTCCCCGACGCCGACGGAAGG CAGCAGATTCTGGGGGCCTCCAAGGCCCGAATGGAAGGCCTGTCGACAAC GGCAGCGGCAGCAACAGGTGAGACGGCGGCGGTAGCCCCACCATCCACGC AGTTACCGCCTTCCGACGACTCCCACACAACAGCTCGTCTGTTGCTCGCG GCACAAGAGCTGAAAACAGTCCCTCCCGCCGTCGACTCCTTCGCAGGCGC TTCGACGGCAACAGCAGCGGTGCTAACCAAAGACGAACGAGGGAAGGCAT CACCAGTCCACCCCGATGGTAGCAGCAGCACCGGTGGCAGTGGGAGTCGT CCCGCCGGGGGCGGGGGCCGGGGCGGGAGGTGGGCGACCGACGTGGACTT GCTGTGGCTGGCGCGGCAGACCGAGGGCTACAGCGGGGCGGACCTGTCCA GCCTGGTCAGGAACGCGGCAATGGTCGCCCTTCGTGAGGAATGGGGCGGG AGGAGGGGCGCCTTGGGCCCGTTTGTCGGTGGCGATAGGGGGGTTGGTAG AAGGGAGGGGGTGTTGATCATAACGCGAAAACATTTCGAGGCAGCGCTGG CGAGCACCCAGCCTTCGTCTGGGACGGAAACGGCGGCGAAGCACGAGAGA TGGGCGCGGCAGTGGCATGTTGGGTCGTGAACAGCAAGCCCCCGCGATCG GCGGTGTGCCTGTGGGTCGCGTGTGTTGTGTGCAACGTGCTTTGAGATGC ACGGAGCGCTTCACGCCGCCGCAAACGGTTTTCGTGCCCCTTGTAGGCTC CTATGCGTAGATGCTGCTGATGTTGTGATGTTTTGTGTATCACCAGACAT TGCTCGTGGGGTGCAAAATCGAGTGTCGGGAAAGAAAAGAGAGAGGGACT GTAGGTGGCGGCTTGTCAAGCGAGACAAGGAACAGAGCTTTTTGACAAGG GATGGTTTCACTGAAAGATAAATGGCGTACACGTACGTTTGCTCTTGCGG ACAAATCTGACCAGCAGCCTCAGCGGTGGCAGCGACCCATGAAAAGGGAT TCTGATGGTGAGAAATGAACGAACTATGAGCGGCGCC
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10500:191..3227+

>mRNA_E-fasciculatus_F_contig10500.404.1 ID=mRNA_E-fasciculatus_F_contig10500.404.1|Name=mRNA_E-fasciculatus_F_contig10500.404.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2244bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10500:191..3227+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGGAGAACATGAGCTCCGCGCCAGTCCACGGGCTGAGCCAGAGTGAAGT
GGATGCTTCTCTCGCACACCGTCCTCCTCGGAGCAGTAGGCGCTCAGGAT
GGAAGAAAAAACTCAGGATGGTAGCTTGCTTTTTTTTCTCATCCTTTGTA
CAATGTTCTCTTGTTCTAACGTGTGACGCTCTTGCGTGGCTGAGTGGCGG
ACATCACCACCATGATTTTTACTGTCAGGCCGTCGACCAGGCATTTCGCA
CGGCGCGAGAGCTAGCACCGTCCATCGTATTCATCGACGAGTTTCAGGCG
CTCTTCGCTTCCAGAGAGGCGGGGGGGGGGACAGGATGGAGAACATGAGC
TCCGCGCCAGTCCACGGGCTGAGCCAGAGTGAAGTGGATGCTTCTCTCGC
ACACCGTCCTCCTCGGAGCAGTAGGCGCTCAGGATGGAAGAAAAAACTCA
GGATGGTAGCTTGCTTTTTTTTCTCATCCTTTGTACAATGTTCTCTTGTT
CTAACGTGTGACGCTCTTGCGTGGCTGAGTGGCGGACATCACCACCATGA
TTTTTACTGTCAGGCCGTCGACCAGGCATTTCGCACGGCGCGAGAGCTAG
CACCGTCCATCGTATTCATCGACGAGTTTCAGGCGCTCTTCGCTTCCAGA
GAGGCGGGGGGGGGGACAGGCTCGCGCCTCGCGTCCCAGCTGCTTGTGTG
CATGGACGAGCTGGCTCGCTGGAGAGCCGCCGCTAGGCGGCGCGTTGCCG
ACACGGCCGATGGAAAAGATAGCACCGGCGACAACGACGGCCCCGCGCCG
GCGGTGCAAGGCGGCGGGGAAGGGGGAGGGGGAGGCAGCGCGAACGTTAT
GGTGCTGGCTGCCACCAACGCCCCGGAGGCGGTCGACGCCGCGTTCTTGC
GGCCGGGCCGTTTCGACGAGCTCGCGCCTCGCGTCCCAGCTGCTTGTGTG
CATGGACGAGCTGGCTCGCTGGAGAGCCGCCGCTAGGCGGCGCGTTGCCG
ACACGGCCGATGGAAAAGATAGCACCGGCGACAACGACGGCCCCGCGCCG
GCGGTGCAAGGCGGCGGGGAAGGGGGAGGGGGAGGCAGCGCGAACGTTAT
GGTGCTGGCTGCCACCAACGCCCCGGAGGCGGTCGACGCCGCGTTCTTGC
GGCCGGGCCGTTTCGACGAGATCGTGTATGCAGGTCTCCCCGACGCCGAC
GGAAGGCAGCAGATTCTGGGGGCCTCCAAGGCCCGAATGGAAGGCCTGTC
GACAACGGCAGCGGCAGCAACAGATCGTGTATGCAGGTCTCCCCGACGCC
GACGGAAGGCAGCAGATTCTGGGGGCCTCCAAGGCCCGAATGGAAGGCCT
GTCGACAACGGCAGCGGCAGCAACAGGCGCTTCGACGGCAACAGCAGCGG
TGCTAACCAAAGACGAACGAGGGAAGGCATCACCAGTCCACCCCGATGGT
AGCAGCAGCACCGGTGGCAGTGGGAGTCGTCCCGCCGGGGGCGGGGGCCG
GGGCGGGAGGTGGGCGACCGACGTGGACTTGCTGTGGCTGGCGCGGCAGA
CCGAGGGCTACAGCGGGGCGGACCTGTCCAGCCTGGTCAGGAACGCGGCA
ATGGTCGCCCTTCGTGAGGAATGGGGCGGGAGGAGGGGCGCCTTGGGCCC
GTTTGTCGGTGGCGATAGGGGGGTTGGTAGAAGGGAGGGGGTGTTGATCA
TAACGCGAAAACATTTCGAGGCAGCGCTGGCGAGCACCCAGCCTTCGTCT
GGGACGGAAACGGCGGCGAAGCACGAGAGATGGGCGCGGCAGTGGCATGT
TGGGTCGTGAGCGCTTCGACGGCAACAGCAGCGGTGCTAACCAAAGACGA
ACGAGGGAAGGCATCACCAGTCCACCCCGATGGTAGCAGCAGCACCGGTG
GCAGTGGGAGTCGTCCCGCCGGGGGCGGGGGCCGGGGCGGGAGGTGGGCG
ACCGACGTGGACTTGCTGTGGCTGGCGCGGCAGACCGAGGGCTACAGCGG
GGCGGACCTGTCCAGCCTGGTCAGGAACGCGGCAATGGTCGCCCTTCGTG
AGGAATGGGGCGGGAGGAGGGGCGCCTTGGGCCCGTTTGTCGGTGGCGAT
AGGGGGGTTGGTAGAAGGGAGGGGGTGTTGATCATAACGCGAAAACATTT
CGAGGCAGCGCTGGCGAGCACCCAGCCTTCGTCTGGGACGGAAACGGCGG
CGAAGCACGAGAGATGGGCGCGGCAGTGGCATGTTGGGTCGTGA
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