mRNA_E-fasciculatus_F_contig10500.404.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: D7FVM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM1_ECTSI) HSP 1 Score: 453 bits (1166), Expect = 6.900e-150 Identity = 258/304 (84.87%), Postives = 265/304 (87.17%), Query Frame = 1
Query: 328 QAVDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKA-SPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALREEWGG-----RRGALGPFVGGDRGVGRREGVLIITRKHFEAALASTQPSSGTETAAKHERWARQWHVGS 1221
+AVDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARR VADTADGKDS GDNDGPAP QGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGR+QIL ASK+RMEGLSTTAAAA SPVHPD SSSTGGSGSRP GGG RGGRWA+DVDLLWL+RQT+GYSGADLSSLVRNAAMVALREE GG RRGAL FVGG RG GR+EGVLIITRKHFEAALASTQPSSGTET AKHERWARQWHVGS
Sbjct: 344 KAVDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRSVADTADGKDSAGDNDGPAPVAQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRRQILRASKSRMEGLSTTAAAAXXXXXXXXXXXXXXXXXXXXSPVHPDRSSSTGGSGSRPVGGGSRGGRWASDVDLLWLSRQTKGYSGADLSSLVRNAAMVALREEGGGXXXXXRRGALSSFVGGGRGTGRKEGVLIITRKHFEAALASTQPSSGTETEAKHERWARQWHVGS 647
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: A0A6H5JGW6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW6_9PHAE) HSP 1 Score: 452 bits (1162), Expect = 7.190e-142 Identity = 262/345 (75.94%), Postives = 270/345 (78.26%), Query Frame = 1
Query: 328 QAVDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTA------------------------------------------TAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALREEWGGR-----RGALGPFVGGDRGVGRREGVLIITRKHFEAALASTQPSSGTETAAKHERWARQWHVGS 1221
+ +DQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARR VADTADGKDS GDN+GP A QGXXXXXXXX ANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGR+QILGASKARMEGLSTTAAAATGA A TAAV T DERG SP HPD SSSTGGSGSRP GGG RGGRWA+DVDLLWL+RQT+GYSGADLSSLVRNAAMVA REE G GA FVGG RG GR+EGVLIITRKHFEAALAST PSSGTETAAKHERWARQWHVGS
Sbjct: 1013 KVIDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRSVADTADGKDSAGDNNGPTRAAQGXXXXXXXXSANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRRQILGASKARMEGLSTTAAAATGAMVAEAPPSTQLSPPDDFDTRVLVAAQEVKTSPPTVDSSAGASTATTAAVPTNDERGSGSPAHPDRSSSTGGSGSRPVGGGSRGGRWASDVDLLWLSRQTKGYSGADLSSLVRNAAMVAFREEGGXXCRXXXXGASSSFVGGGRGTGRKEGVLIITRKHFEAALASTHPSSGTETAAKHERWARQWHVGS 1357
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: W7T2R5_9STRA (Cell division control protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2R5_9STRA) HSP 1 Score: 120 bits (302), Expect = 4.080e-25 Identity = 101/301 (33.55%), Postives = 133/301 (44.19%), Query Frame = 1
Query: 340 QAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALREE----W---GGRRGALGPFVGGDRGVGRREGVLIITRKHFEAALASTQPSSGTETAAKHERWARQWHVGS 1221
+AFR A+E P ++FIDEFQALF++R RLASQLL+ MD L R V + A G V VLAATNAPEA+D+AFLRPGRFD +VY GLPD R IL + RM RWA D+ + LA QTEG+SGADL++L+R AA+ AL W GGR G + V + +I R+ +AAL + + ++ E+ +K E + R+ H GS
Sbjct: 577 EAFRVAQENRPVVIFIDEFQALFSAR-GXXXXXXRLASQLLLSMDALRR-EHGREGEVGEEAAGF--------------------------VSVLAATNAPEAIDSAFLRPGRFDRLVYVGLPDQQDRADILDRWRERM-------------------------------------------------------RWAEDMGVTELAEQTEGFSGADLANLMRRAALHALAAHKSPPWPDGGGRDGRASQGGSSEAAVP----LPLIRREDVQAALRTCRATTSPESLSKFEAY-RRLHGGS 789
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: A0A835ZEI6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI6_9STRA) HSP 1 Score: 114 bits (286), Expect = 4.200e-23 Identity = 92/260 (35.38%), Postives = 112/260 (43.08%), Query Frame = 1
Query: 328 QAVDQAFRTARELAPSIVFIDEFQ------------------------ALFASREAG--GGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALR 1029
+AV +AF ARELAP+IVFIDEF+ ALFA R AG G GSRLASQLL+ MDELA WRA LAATN+PE++D AFLRPGRFDE++YAGLP A R+ +L A++A AAAA GA W VD +AR+ G+SGAD++ LVR AA L+
Sbjct: 483 RAVARAFAAARELAPAIVFIDEFESFTARERALVLRGASAHVARPAPPALFADRAAGDGGAVGSRLASQLLLSMDELAAWRARRGXXXXXXX----------------------------XXXXLAATNSPESIDPAFLRPGRFDEVIYAGLPTAAARRAMLEAARA--------AAAAAGAP------------------------------------------WHGGVDAAAVARRAHGFSGADVAGLVRGAAAATLQ 664
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: A0A7S2A2S2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A2S2_TRICV) HSP 1 Score: 96.7 bits (239), Expect = 3.180e-20 Identity = 61/134 (45.52%), Postives = 70/134 (52.24%), Query Frame = 1
Query: 355 ARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARM 756
AR APS+VFIDEFQALF R G G RLAS LL C+D+ ARWR A A G G V+VL ATNAP VD AFLRPGRFD +V+ GLP R+ +L +RM
Sbjct: 1 ARRNAPSVVFIDEFQALFTERGRGSG---RLASVLLQCLDDAARWREADAGAGASGKGGGRKNGSE------------------RRVVVLGATNAPWMVDRAFLRPGRFDRVVHVGLPTEGEREAVLSVHTSRM 113
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: A0A830HVK1_9CHLO (Uncharacterized protein n=4 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HVK1_9CHLO) HSP 1 Score: 102 bits (255), Expect = 1.940e-19 Identity = 92/292 (31.51%), Postives = 117/292 (40.07%), Query Frame = 1
Query: 343 AFRTARELAPSIVFIDEFQAL--FASREAGGG----TGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALREEWGGRRGALGPFVGGDRGVGRREGVLIITRKHFEAALASTQPSSGTETAAKHERWA 1200
AFR ARE AP I+ IDE A+ A ++GGG G RL + LL MD L + A +VLA TN P+AVDAA LR GR DE+VY GLPD +GR Q L A A V DG DVD+ +A ++EG++GAD++SLVR AAM AL + + V+ + KHF ALA T+PS E A++ERWA
Sbjct: 403 AFRRAREAAPCILLIDEIDAVGGAARTKSGGGGAPGAGERLLTTLLAEMDGLGQHEGA---------------------------------------IVLACTNRPDAVDAALLRAGRCDEVVYVGLPDQEGRLQALLAHTAN--------------------------------VAIDG-----------------------DVDMRDVASRSEGFTGADIASLVRQAAMCALDDA---------------------DEVVAVNCKHFHKALALTRPSVDDEDIARYERWA 579
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: A0A7C3N4E2_9ARCH (AAA family ATPase n=5 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7C3N4E2_9ARCH) HSP 1 Score: 102 bits (253), Expect = 4.730e-19 Identity = 84/285 (29.47%), Postives = 118/285 (41.40%), Query Frame = 1
Query: 328 QAVDQAFRTARELAPSIVFIDEFQALFASREAG---GGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALREEWGGRRGALGPFVGGDRGVGRREGVLIITRKHFEAALASTQPSSGTE 1173
+A+ + FR A++ APSI+F DE A+ R G G R+ SQLL MD + R V+V+AATN P+ VD A LRPGRFD+++Y LPD D R++IL K + +P A D+D+ LAR+TEGY+GADL+++ A M+A+RE G +GA D+ G + L + R+HFE AL +P S E
Sbjct: 535 RAIREVFRRAKQAAPSIIFFDEIDAIAPIRGGGYGDSGVTERVISQLLTEMDGIEELRG---------------------------------------VVVIAATNRPDIVDPALLRPGRFDKLLYVPLPDFDARKEIL---KIHLR-------------------------------------------KKPL---------AEDIDVDELARRTEGYTGADLAAICNTAVMLAIREHIMGNKGA-------DK-TGEKLRELKVYRRHFEEALKKVKPMSQRE 717
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: I2CRR6_NANGC (AAA_lid_3 domain-containing protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CRR6_NANGC) HSP 1 Score: 94.0 bits (232), Expect = 1.030e-18 Identity = 71/210 (33.81%), Postives = 95/210 (45.24%), Query Frame = 1
Query: 613 VMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALREE----W---GGRRGALGPFVGGDRGVGRREGVLIITRKHFEAALASTQPSSGTETAAKHERWARQWHVGS 1221
V VLAATNAPEA+D+AFLRPGRFD +VY GLPD R IL + RM RWA D+ + LA QTEG+SGADL++L+R AA+ AL W GGR G + V + +I R+ +AAL + + ++ E+ +K E + R+ H GS
Sbjct: 22 VSVLAATNAPEAIDSAFLRPGRFDRLVYVGLPDQQDRADILDRWRERM-------------------------------------------------------RWAEDMGVAELAEQTEGFSGADLANLMRRAALHALAAHKSPPWPDGGGRDGRASQGGSSEAAVP----LPLIRREDVQAALRTCRATTSPESLSKFEAY-RRLHGGS 171
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: V9EMF2_PHYPR (Uncharacterized protein (Fragment) n=18 Tax=Phytophthora TaxID=4783 RepID=V9EMF2_PHYPR) HSP 1 Score: 99.4 bits (246), Expect = 3.430e-18 Identity = 71/234 (30.34%), Postives = 103/234 (44.02%), Query Frame = 1
Query: 328 QAVDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALR 1029
+A+ +AF TAR L+P ++FIDEFQ+LF SR G T SR+ SQLL+ +D L ++ +D A G+ + VLAATNA A+D AFL+PGRF+ +VY GLP+A+ R IL +M W+ DV+L L +TEG + A L +L ++AA+ A++
Sbjct: 541 KAITRAFDTARALSPCMIFIDEFQSLFGSRSTAGQTTSRMISQLLMELDALKAVSDDSKAHASDVAAGR--------------------------IFVLAATNALSAIDPAFLQPGRFENVVYVGLPNANERNAILEIQCNKMP-------------------------------------------------------WSQDVELTKLVLETEGANAASLIALCQSAAIQAMQ 693
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Match: A0A6A4FQM9_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4FQM9_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 3.480e-18 Identity = 74/234 (31.62%), Postives = 106/234 (45.30%), Query Frame = 1
Query: 328 QAVDQAFRTARELAPSIVFIDEFQALFASREAGGGTGSRLASQLLVCMDELARWRAAARRRVADTADGKDSTGDNDGPAPAVQGXXXXXXXXXANVMVLAATNAPEAVDAAFLRPGRFDEIVYAGLPDADGRQQILGASKARMEGLSTTAAAATGASTATAAVLTKDERGKASPVHPDGSSSTGGSGSRPAGGGGRGGRWATDVDLLWLARQTEGYSGADLSSLVRNAAMVALR 1029
+A+ +AF TAR L+P ++FIDEFQ+LF +R G T SR+ SQLL+ +D L + V+D DS D A + G + VLAATNA A+D AFL+PGRF+ +VY GLP+A+ R+ IL + +M W DVDL L +T G + A L +L ++AA+ A++
Sbjct: 544 KAITRAFDTARALSPCMIFIDEFQSLFGNRSTAGQTTSRMISQLLMELDAL--------KAVSD-----DSEVYGDAAASSTVGNISTG-----RIFVLAATNALSAIDPAFLQPGRFENVVYVGLPNANERKSILEIQRRKMP-------------------------------------------------------WNQDVDLARLVEETNGANAASLIALCQSAAIQAMQ 704 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10500.404.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10500.404.1 >prot_E-fasciculatus_F_contig10500.404.1 ID=prot_E-fasciculatus_F_contig10500.404.1|Name=mRNA_E-fasciculatus_F_contig10500.404.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=374bp MENMSSAPVHGLSQSEVDASLAHRPPRSSRRSGWKKKLRMVACFFFSSFVback to top mRNA from alignment at E-fasciculatus_F_contig10500:191..3227+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig10500.404.1 ID=mRNA_E-fasciculatus_F_contig10500.404.1|Name=mRNA_E-fasciculatus_F_contig10500.404.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=3037bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10500:191..3227+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig10500:191..3227+ >mRNA_E-fasciculatus_F_contig10500.404.1 ID=mRNA_E-fasciculatus_F_contig10500.404.1|Name=mRNA_E-fasciculatus_F_contig10500.404.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=2244bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10500:191..3227+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |