mRNA_E-fasciculatus_F_contig15870.4028.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15870.4028.1 vs. uniprot
Match: D7G1T3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T3_ECTSI) HSP 1 Score: 244 bits (622), Expect = 1.610e-80 Identity = 127/153 (83.01%), Postives = 132/153 (86.27%), Query Frame = 1
Query: 1 MSGRISGPAGKQDAHGDAVPERGADGDGATAAGGGPPDGNSFVGLMGEDDSGTWIESQNVDGLEILVKDDLRLWPDRLWVNDRGFDREGNFVYGNQRDVPYKMRRVAAGGPLEWTLGARHRTKEAYAEKMSAIGVTPGQRLGPPVRRRPAAGT 459
M G ISGP GKQD G AVPERGA G AAGGG G SFVGLMGEDDSGTW+ESQNVDGLEILVKDDLRLWPDRLWVNDRGFDR+GNFVYGNQRDVPYKMRRV AGGPLEWTLGARHRT++ YAE+MSAIGVTPGQRLGPPVR AGT
Sbjct: 1 MPGGISGP-GKQDTDGGAVPERGA---GEDAAGGG---GKSFVGLMGEDDSGTWVESQNVDGLEILVKDDLRLWPDRLWVNDRGFDRQGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAERMSAIGVTPGQRLGPPVRIAAPAGT 146
BLAST of mRNA_E-fasciculatus_F_contig15870.4028.1 vs. uniprot
Match: A0A6H5K9Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Q8_9PHAE) HSP 1 Score: 239 bits (611), Expect = 3.130e-75 Identity = 130/163 (79.75%), Postives = 136/163 (83.44%), Query Frame = 1
Query: 1 MSGRISGPAGKQDAHGDAVPERGADGDGATAAGGGPPDGNSFVGLMGEDDSGTWIESQNVDGLEILVKDDLRLWPDRLWVNDRGFDREGNFVYGNQRDVPYKMRRVAAGGPLEWTLGARHRTKEAYAEKMSAIGVTPGQRLGPPVRRRPAAGTPAGTGSGGGG 489
M G ISGP GKQDA+G AVPERGA G AAGGG G SFVGLMG+DDSGTW+ESQNVDGLEILVKDDLRLWPD LWVNDRGFDR+GNFVYGNQRDVPYKMRRV AGGPLEWTLGARHRT++ YAEKMSAIGVT GQRL PPVR PAGTG GGG
Sbjct: 269 MPGGISGP-GKQDANGGAVPERGA---GEDAAGGG---GKSFVGLMGKDDSGTWVESQNVDGLEILVKDDLRLWPDSLWVNDRGFDRDGNFVYGNQRDVPYKMRRVTAGGPLEWTLGARHRTEKTYAEKMSAIGVTLGQRLRPPVR----VAAPAGTGGTGGG 420
BLAST of mRNA_E-fasciculatus_F_contig15870.4028.1 vs. uniprot
Match: A0A7S2A9U5_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A9U5_TRICV) HSP 1 Score: 87.8 bits (216), Expect = 1.730e-18 Identity = 45/103 (43.69%), Postives = 58/103 (56.31%), Query Frame = 1
Query: 163 IESQNVDGLEILVKDDLRLWPDRLWVNDRGFDREG-NFVYGNQRDVPYKMRRVAA----------------------GGPLEWTLGARHRTKEAYAEKMSAIG 402
+ S + G +I V+D+L LW LW+NDRG+D EG +FVYGNQR VPY+M RV G L+WTLG RHRT+ Y E++ AIG
Sbjct: 92 VPSLMIPGAKIRVRDELSLWDGALWINDRGYDPEGGDFVYGNQRGVPYEMGRVTTFLRGDGDGEGSPPLFATERTVVNGDLKWTLGPRHRTEGLYRERVEAIG 194
BLAST of mRNA_E-fasciculatus_F_contig15870.4028.1 vs. uniprot
Match: B7G7Q1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7Q1_PHATC) HSP 1 Score: 87.0 bits (214), Expect = 2.080e-17 Identity = 42/91 (46.15%), Postives = 56/91 (61.54%), Query Frame = 1
Query: 163 IESQNVDGLEILVKDDLRLWPDRLWVNDRGFDREG-NFVYGNQRDVPYKMRRVA----------AGGPLEWTLGARHRTKEAYAEKMSAIG 402
+ESQ + G +IL+KD L LWPD LW++DRGFD + F+YGNQR VPY++ RV L WTLG R++ Y +KM A+G
Sbjct: 218 VESQMMPGQKILIKDQLSLWPDELWIHDRGFDPDTMRFIYGNQRGVPYRLERVTDIALNNGRTIVQEDLAWTLGPDFRSEGEYQDKMVAVG 308
BLAST of mRNA_E-fasciculatus_F_contig15870.4028.1 vs. uniprot
Match: K0TER5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TER5_THAOC) HSP 1 Score: 84.3 bits (207), Expect = 3.870e-16 Identity = 46/119 (38.66%), Postives = 62/119 (52.10%), Query Frame = 1
Query: 121 SFVGLMGEDDSGTWIESQN-VDGLEILVKDDLRLWPDRLWVNDRGFDREGN-----------FVYGNQRDVPYKMRRVA--------------AGGPLEWTLGARHRTKEAYAEKMSAI 399
SF M SG ++S + + G IL+KD+L LW D+ W+NDRG+D +G FVYGN+R VPYK+ RV+ G L+WTLG +RT Y K+ AI
Sbjct: 271 SFHATMEAGSSGAIVDSISMIPGQRILIKDELSLWEDKFWINDRGYDPDGETDSMNENQDMPFVYGNRRGVPYKLERVSHIVSTAGAELQVAPVSGELQWTLGGSYRTPGEYEAKLKAI 389
BLAST of mRNA_E-fasciculatus_F_contig15870.4028.1 vs. uniprot
Match: A0A7S2SCY1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCY1_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 3.910e-15 Identity = 38/99 (38.38%), Postives = 56/99 (56.57%), Query Frame = 1
Query: 151 SGTWIESQNVDGLEILVKDDLRLWPDRLWVNDRGFDREG--NFVYGNQRDVPYKMRRVAAGG--------------PLEWTLGARHRTKEAYAEKMSAI 399
+GT + SQ + G+ I ++D+L LW + W+NDRG D + +F+YGNQR +PYK++RV L WTLG HRT+ Y + M+ I
Sbjct: 156 NGTTVASQVIPGMYINIRDELSLWKNEFWINDRGLDPQNVSSFIYGNQRGIPYKLKRVTQNNNIFRQWKPRMIHDPKLAWTLGPDHRTEFDYQQMMNEI 254
BLAST of mRNA_E-fasciculatus_F_contig15870.4028.1 vs. uniprot
Match: A0A7S4HD69_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4HD69_9EUKA) HSP 1 Score: 73.2 bits (178), Expect = 1.590e-13 Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 1
Query: 163 IESQNVDGLEILVKDDLRLWPDRLWVNDRGFDREGNFVYGNQRDVPYKMRR 315
+ES + G+ I+V+DD+ LW D LWVNDRG D EGN++YGN RDVPYKM R
Sbjct: 86 VESARM-GMPIVVRDDVTLWSDALWVNDRGADMEGNYLYGNVRDVPYKMDR 135
BLAST of mRNA_E-fasciculatus_F_contig15870.4028.1 vs. uniprot
Match: A0A5J4Z4Z5_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4Z5_PORPP) HSP 1 Score: 77.0 bits (188), Expect = 1.990e-13 Identity = 34/51 (66.67%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 193 ILVKDDLRLWPDRLWVNDRGFDREGNFVYGNQRDVPYKMRRVAAGGPLEWT 345
ILVKDDL L + LWVNDRGFD G+FVYGN+R VPYKM+R + LEWT
Sbjct: 428 ILVKDDLILTGNELWVNDRGFDENGHFVYGNRRGVPYKMKRTSCNPHLEWT 478
BLAST of mRNA_E-fasciculatus_F_contig15870.4028.1 vs. uniprot
Match: A0A7S2V3D9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V3D9_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.790e-12 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 1
Query: 163 IESQNVDGLEILVKDDLRLWPDRLWVNDRGFDREGN-FVYGNQRDVPYKMRRVAAGGPLEWTLGARHRTKEAYAEKMSAI 399
I+S+ V G+ + V DDL L RLWVNDRGFD++ +YGN R PY++ R L WTL +++KE K A+
Sbjct: 41 IDSEMVPGMRVKVLDDLWLDESRLWVNDRGFDKQTKCLLYGNHRGKPYQLERATHQNSLAWTLSENYQSKEKIRLKQLAL 120
BLAST of mRNA_E-fasciculatus_F_contig15870.4028.1 vs. uniprot
Match: A0A7R9ZKH3_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZKH3_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 3.350e-12 Identity = 42/106 (39.62%), Postives = 55/106 (51.89%), Query Frame = 1
Query: 163 IESQNVDGLEILVKDDLRLWPDRLWVNDRGFDREGN-FVYGNQRDVPYKMRRVAA--GGP-----------------------LEWTLGARHRTKEAYAEKMSAIG 402
+ESQ + G +I + D L L+ D ++NDRGF+ E N ++YGNQR VPY++ RVA GG L WTLG HRT E Y K+ IG
Sbjct: 252 VESQMMPGQKIKILDQLSLYDDVFYINDRGFNPETNEYIYGNQRSVPYRLERVAKWKGGDADEDNDADDSVVTMVGRDVVNESLAWTLGDAHRTPEEYKSKIDEIG 357 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15870.4028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 22
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15870.4028.1 >prot_E-fasciculatus_F_contig15870.4028.1 ID=prot_E-fasciculatus_F_contig15870.4028.1|Name=mRNA_E-fasciculatus_F_contig15870.4028.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=164bp MSGRISGPAGKQDAHGDAVPERGADGDGATAAGGGPPDGNSFVGLMGEDDback to top mRNA from alignment at E-fasciculatus_F_contig15870:1750..2241- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15870.4028.1 ID=mRNA_E-fasciculatus_F_contig15870.4028.1|Name=mRNA_E-fasciculatus_F_contig15870.4028.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=492bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15870:1750..2241- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15870:1750..2241- >mRNA_E-fasciculatus_F_contig15870.4028.1 ID=mRNA_E-fasciculatus_F_contig15870.4028.1|Name=mRNA_E-fasciculatus_F_contig15870.4028.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=984bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15870:1750..2241- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |