Homology
BLAST of mRNA_E-fasciculatus_F_contig10024.40.1 vs. uniprot
Match: A0A6H5K946_9PHAE (Lipase_3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K946_9PHAE) HSP 1 Score: 106 bits (264), Expect = 3.630e-21 Identity = 47/52 (90.38%), Postives = 50/52 (96.15%), Query Frame = 1 Query: 1 GCLFDSPWLRLSHPNYTHRMNHYENDIADRLQHHLLHSGTPSGGSSSSPAIV 156
GCLFDSPWLRLSHPNYTHRM HYEN++ADRLQHHLLHSGTPS GSSSSPAI+
Sbjct: 388 GCLFDSPWLRLSHPNYTHRMIHYENEVADRLQHHLLHSGTPSSGSSSSPAII 439
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 93.2 |
| Seed ortholog evalue | 6e-17 |
| Seed eggNOG ortholog | 2880.D7FY67 |
| EggNOG free text desc. | phospholipase A1 activity |
| EggNOG OGs | KOG4569@1,KOG4569@2759 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| Hectar predicted targeting category | other localisation |
| Exons | 1 |
| Model size | 1445 |
| Cds size | 246 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig10024.40.1 >prot_E-fasciculatus_F_contig10024.40.1 ID=prot_E-fasciculatus_F_contig10024.40.1|Name=mRNA_E-fasciculatus_F_contig10024.40.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=82bp
MNHYENDIADRLQHHLLHSGTPSGGSSSSPAIVRSAGISASSSGGGSIIG
SERGAASEAVRRDSRPGAGEVAAGSVRCDVR* back to topmRNA from alignment at E-fasciculatus_F_contig10024:481..1925+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-fasciculatus_F_contig10024.40.1 ID=mRNA_E-fasciculatus_F_contig10024.40.1|Name=mRNA_E-fasciculatus_F_contig10024.40.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1445bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10024:481..1925+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GGTTGCCTTTTCGACAGCCCCTGGCTACGGCTGTCGCACCCCAACTACAC
GCACCGGATGAACCACTACGAGAACGACATCGCGGATCGCCTGCAGCACC
ACCTGCTCCACAGCGGCACCCCAAGCGGCGGGTCTTCCTCTTCTCCTGCT
ATCGTGAGAAGCGCGGGTATCAGTGCAAGCAGCAGCGGGGGCGGCAGCAT
CATCGGCAGTGAGAGGGGGGCGGCGTCAGAAGCTGTGCGGCGAGATTCTA
GGCCGGGAGCGGGGGAAGTGGCGGCGGGGAGCGTTCGGTGTGACGTGCGA
TGACACCCTGTGCTCTGGACCACGCCACGTGGCCCCCTCGGAACCGTGCT
ACAGCAGTATTGTAGTGGCCTGGATATATCGCGGTGCGGTTCCCGATAAA
ATCCCTTGGCACAAGCTGCAGCCTACTCGATGCCCCCGCTCTTCGCCGCA
GCAACCAACAGATCTTGATGGATGCTAGACTTATTCAGGGACCTTCCCCC
AAAGCGCGGGTCCCGATATAACGCGGTGACTTTTTCTGTCACTTCACCTC
GCTATAATCGGGACCATCACTGGTGCTGTGACTTACGTATGTAGTCTTGC
CCGGCAAAGGGACTGGCTTAGGTAAGGGAGCAAGCTGGTTGTCTACGCGC
CGGCGCCCCCGCTCGAAAGGGCATGCTTGCGCTTTCGTGTGTAGAGAGGG
AAGTAGAGACAGAGAGAGTGAGAGCGAGAGTGAGGGTGGAAGAGATTAAG
TGTGTGTGATTCAGAGAAAGAGAGAGGGAGAGAGAGAAAAAGAGAGAGGT
AGAGGCCATACAGACTGAGGCAGAGAGAGCGAGAAACATGACCACCCTAT
AGACAGGGCATGTTTTCTTGGTTGCACGCACCCGAGGGTGGATTACTCGC
GCCGTGGTTTCTAGTCGTACAGTAGCCTTGGGTAGAGTAGAAGTCCTGGT
GGAGATGATGTGGATGCAGTAGTGGAGTGTATACTGGTCAGCATGTAAGC
CCCCCTCTCCAGGGTGAAGTGAAGTGTCGTCATCCCCGCCCGGCCGTAGT
GTAATGGAAACAGGGGGCCGAAGGCAATTCGACCCTTGTTAGAACCCCCA
TCAAAGTGCATTGAAAGCTGTTATGCCTTGCCAAGTGTCGATATGGCGCA
TGTGCTAGCATCCTCGGCAAAACTGCTGTGGTATTGACGGGGACGGCCCA
TGCCACCAGTTCTTGGAAGAAAACTCGTGTTGGTGCGTGAATTGTTGGTA
CAGCGGTGGGGGTCTCGGTTGAGCGCCCCCCCCATTTAGCGACATGCCCT
ATTTAGCGACCACAAAACCCCGTGGCACCGCCGCACCCCGGTAGTTTGGT
TTAGCGACCTGCCCTGAATACTGGCCACATTTCGTCGTGACGGTCGCTAA
CCCGCCCCCCTCACTGTACATTGCCATGTGGGTTAAAGAGGTTCG back to topCoding sequence (CDS) from alignment at E-fasciculatus_F_contig10024:481..1925+ >mRNA_E-fasciculatus_F_contig10024.40.1 ID=mRNA_E-fasciculatus_F_contig10024.40.1|Name=mRNA_E-fasciculatus_F_contig10024.40.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=492bp|location=Sequence derived from alignment at E-fasciculatus_F_contig10024:481..1925+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
ATGAACCACTACGAGAACGACATCGCGGATCGCCTGCAGCACCACCTGCT
CCACAGCGGCACCCCAAGCGGCGGGTCTTCCTCTTCTCCTGCTATCGTGA
GAAGCGCGGGTATCAGTGCAAGCAGCAGCGGGGGCGGCAGCATCATCGGC
AGTGAGAGGGGGGCGGCGTCAGAAGCTGTGCGGCGAGATTCTAGGCCGGG
AGCGGGGGAAGTGGCGGCGGGGAGCGTTCGGTGTGACGTGCGATGAATGA
ACCACTACGAGAACGACATCGCGGATCGCCTGCAGCACCACCTGCTCCAC
AGCGGCACCCCAAGCGGCGGGTCTTCCTCTTCTCCTGCTATCGTGAGAAG
CGCGGGTATCAGTGCAAGCAGCAGCGGGGGCGGCAGCATCATCGGCAGTG
AGAGGGGGGCGGCGTCAGAAGCTGTGCGGCGAGATTCTAGGCCGGGAGCG
GGGGAAGTGGCGGCGGGGAGCGTTCGGTGTGACGTGCGATGA back to top
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