mRNA_E-fasciculatus_F_contig15797.3986.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15797.3986.1 vs. uniprot
Match: D8LGE8_ECTSI (EDR2_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGE8_ECTSI) HSP 1 Score: 201 bits (512), Expect = 1.990e-62 Identity = 96/105 (91.43%), Postives = 99/105 (94.29%), Query Frame = 1
Query: 31 MEVGATVPQADCPSTDGAGMPPHSWSQVDAEKFMVRHGPNYSKSKRKGRNAGGSFYEARAMDWYHCTRKLDGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLPME 345
MEV ATVPQ DCPS DGAGMPPHSWSQ+DAEKFMVRHGPNYSK+KRKGRNAGGSFYEARAMDWY T K+DGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLPME
Sbjct: 1 MEVRATVPQVDCPSADGAGMPPHSWSQLDAEKFMVRHGPNYSKNKRKGRNAGGSFYEARAMDWYRGTGKVDGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLPME 105
BLAST of mRNA_E-fasciculatus_F_contig15797.3986.1 vs. uniprot
Match: A0A835ZBF7_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBF7_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.690e-14 Identity = 42/103 (40.78%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 40 GATVPQADCPSTDGAGMPPHSWSQVDAEKFMVRHGPNYSKSKRKGRNAGGSFYEARAMDWYHCT-RKLDGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLPME 345
GA++PQ + G H W+ A FMVRHGPNY + K +A + YE A+DW+ C RK D V P A HPS+PS+++VN QLP+E
Sbjct: 170 GASLPQLAAAAAHGEHPLTHCWAPTKASSFMVRHGPNYKRRGLKVPSA-PALYEVVAVDWFTCAGRKADNVGARVLLPAPPHAS-PHPSIPSIIIVNAQLPLE 270
BLAST of mRNA_E-fasciculatus_F_contig15797.3986.1 vs. uniprot
Match: A0A7S3BXI5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BXI5_9EUKA) HSP 1 Score: 58.5 bits (140), Expect = 3.230e-8 Identity = 31/80 (38.75%), Postives = 44/80 (55.00%), Query Frame = 1
Query: 100 SWSQVDAEKFMVRHGPNYSKSKRKGRNAGGSFYEARAMDWYHCTRKLDGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLP 339
+W+ FMVRHGPNYSK+ RK +A S Y+ A+D + C KL +L + PE +PS LV+++ LP
Sbjct: 60 AWTPCPGPAFMVRHGPNYSKTGRKQPSA-SSLYDVYAVDLFRCPEKLHDPGRLLSLP--PEDTMDKHGIPSNLVLSLLLP 136
BLAST of mRNA_E-fasciculatus_F_contig15797.3986.1 vs. uniprot
Match: UPI001CC4CE6E (uncharacterized protein LOC122638277 n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC4CE6E) HSP 1 Score: 58.9 bits (141), Expect = 1.030e-7 Identity = 36/91 (39.56%), Postives = 49/91 (53.85%), Query Frame = 1
Query: 67 PSTDGAGMPPHSWSQVDAEKFMVRHGPNYSKSKRKGRNAGGSFYEARAMDWYHCTRKLDGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLP 339
PS+ G P WS V F +R G NY + KRK + S Y +D + C RK+D +A+ LP K +H VPSLL++N+QLP
Sbjct: 305 PSSIGEKPTPGHWSSVSPSIFKLR-GENYFRDKRKSPASNYSPYTPIGVDLFVCPRKIDHIAQHLE---LPTVK-THEKVPSLLIINIQLP 390
BLAST of mRNA_E-fasciculatus_F_contig15797.3986.1 vs. uniprot
Match: UPI001C4ED429 (uncharacterized protein LOC122075251 isoform X2 n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4ED429) HSP 1 Score: 58.5 bits (140), Expect = 1.390e-7 Identity = 35/91 (38.46%), Postives = 48/91 (52.75%), Query Frame = 1
Query: 67 PSTDGAGMPPHSWSQVDAEKFMVRHGPNYSKSKRKGRNAGGSFYEARAMDWYHCTRKLDGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLP 339
P + G P WS + F +R G NY K KRK S Y A+D + C RK++ +A+ LP K +H VPSLL++N+QLP
Sbjct: 273 PCSTGEKPTPGCWSSISPSVFKLR-GENYFKDKRKSPAPDCSPYTLIAVDLFVCARKINHIAQHVE---LPSVK-AHEKVPSLLIINIQLP 358
BLAST of mRNA_E-fasciculatus_F_contig15797.3986.1 vs. uniprot
Match: A0A0L9TC24_PHAAN (EDR2_C domain-containing protein n=6 Tax=Vigna TaxID=3913 RepID=A0A0L9TC24_PHAAN) HSP 1 Score: 57.0 bits (136), Expect = 4.700e-7 Identity = 34/82 (41.46%), Postives = 45/82 (54.88%), Query Frame = 1
Query: 94 PHSWSQVDAEKFMVRHGPNYSKSKRKGRNAGGSFYEARAMDWYHCTRKLDGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLP 339
P SWS V F +R G N+ + K+K S YE +D + C RK+D +AK L E H +VPSLL+VN+QLP
Sbjct: 190 PGSWSVVSPSVFSLR-GENFFRDKQKCPAPDFSPYEPIGVDLFACPRKIDHIAKHLELPPLKE----HENVPSLLIVNIQLP 266
BLAST of mRNA_E-fasciculatus_F_contig15797.3986.1 vs. uniprot
Match: A0A2P6R2N7_ROSCH (EDR2_C domain-containing protein n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6R2N7_ROSCH) HSP 1 Score: 56.2 bits (134), Expect = 8.880e-7 Identity = 34/82 (41.46%), Postives = 44/82 (53.66%), Query Frame = 1
Query: 94 PHSWSQVDAEKFMVRHGPNYSKSKRKGRNAGGSFYEARAMDWYHCTRKLDGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLP 339
P SWS++ F +R G NY K K+K S Y +D + C RK D +A+ LP K H VPSLL+VN+QLP
Sbjct: 239 PGSWSEISPSIFKLR-GENYFKDKQKYPAPNCSSYVPIGIDMFICPRKRDHIAQYLE---LPSVK-PHDKVPSLLIVNIQLP 315
BLAST of mRNA_E-fasciculatus_F_contig15797.3986.1 vs. uniprot
Match: A0A7N2R002_QUELO (EDR2_C domain-containing protein n=3 Tax=Fagaceae TaxID=3503 RepID=A0A7N2R002_QUELO) HSP 1 Score: 55.8 bits (133), Expect = 1.230e-6 Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = 1
Query: 67 PSTDGAGMPPHSWSQVDAEKFMVRHGPNYSKSKRKGRNAGGSFYEARAMDWYHCTRKLDGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLP 339
P G + P WS++ F +R G +Y K KRK S Y +D + C +K+D +A+ LP K ++ VPSLL+VN+QLP
Sbjct: 287 PRCTGEKLTPGCWSEIPPSTFKLR-GESYFKDKRKSPAPNNSPYTPIGVDLFVCPKKIDHIAQHIE---LPNVK-ANDKVPSLLIVNIQLP 372
BLAST of mRNA_E-fasciculatus_F_contig15797.3986.1 vs. uniprot
Match: A0A835Z8Q7_9STRA (EDR2_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q7_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 1.700e-6 Identity = 37/106 (34.91%), Postives = 53/106 (50.00%), Query Frame = 1
Query: 37 VGATVPQADCPSTDGAGMPPHSWSQVDAEKFMVRHGPNYSKSKRKGRNAGGSFYEARAMDWYHCTRKLDGVAKL-----AAAEGLPEAKFSHPSVPSLLVVNVQLP 339
VGA+ + D P P + WS DA F VR Y KS+ KG + + Y+ +AMD YH +++ + A G+P HP +PSL ++NVQLP
Sbjct: 212 VGASYARNDAPEQ----APCNRWSPGDATGFCVRT-KGYCKSREKGPSL-AALYDLKAMDCYHSPYRINDIKSHVRGLDALLAGVPPT--GHPDIPSLFIINVQLP 309
BLAST of mRNA_E-fasciculatus_F_contig15797.3986.1 vs. uniprot
Match: UPI000CE26EE9 (uncharacterized protein LOC111993041 n=1 Tax=Quercus suber TaxID=58331 RepID=UPI000CE26EE9) HSP 1 Score: 55.1 bits (131), Expect = 2.110e-6 Identity = 33/91 (36.26%), Postives = 48/91 (52.75%), Query Frame = 1
Query: 67 PSTDGAGMPPHSWSQVDAEKFMVRHGPNYSKSKRKGRNAGGSFYEARAMDWYHCTRKLDGVAKLAAAEGLPEAKFSHPSVPSLLVVNVQLP 339
P G + P WS++ F +R G +Y K KRK S Y +D + C +K+D +A+ LP K ++ VPSLL+VN+QLP
Sbjct: 91 PRCMGEKLTPGCWSEIPPSTFKLR-GESYFKDKRKSPAPNNSPYTPIGVDLFVCPKKIDHIAQHIE---LPNVK-ANDKVPSLLIVNIQLP 176 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15797.3986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15797.3986.1 >prot_E-fasciculatus_F_contig15797.3986.1 ID=prot_E-fasciculatus_F_contig15797.3986.1|Name=mRNA_E-fasciculatus_F_contig15797.3986.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=108bp MEVGATVPQADCPSTDGAGMPPHSWSQVDAEKFMVRHGPNYSKSKRKGRNback to top mRNA from alignment at E-fasciculatus_F_contig15797:521..874- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15797.3986.1 ID=mRNA_E-fasciculatus_F_contig15797.3986.1|Name=mRNA_E-fasciculatus_F_contig15797.3986.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=354bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15797:521..874- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15797:521..874- >mRNA_E-fasciculatus_F_contig15797.3986.1 ID=mRNA_E-fasciculatus_F_contig15797.3986.1|Name=mRNA_E-fasciculatus_F_contig15797.3986.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=648bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15797:521..874- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |