prot_E-fasciculatus_F_contig10495.396.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10495.396.1
Unique Nameprot_E-fasciculatus_F_contig10495.396.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length138
Homology
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BLAST of mRNA_E-fasciculatus_F_contig10495.396.1 vs. uniprot
Match: D7G9G3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G3_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 2.650e-48
Identity = 89/116 (76.72%), Postives = 94/116 (81.03%), Query Frame = 0 
Query:    1 MATTLSGCWQWWPMRRARRSERETSRGVSHRVKSRFTTVRMPAQVPSAGPAGGGKPHSPSDGGGEEKRTSSASCVVEGAVAGLETVKDGEGATGKH-APQKDDGDSQPAAAVAVKV 115
            MATT SGCW WWPMRRARRSERE  RGVS +VKSRFTTVRMPAQV SAGPAGGGKPHSP  GG   +  SSAS    GAVAGLET +DGE + GKH + QKDDGDSQPAAAVAVKV
Sbjct:    1 MATTFSGCWPWWPMRRARRSEREAPRGVSRKVKSRFTTVRMPAQVSSAGPAGGGKPHSPCGGGSGGEEKSSASYAAVGAVAGLETGRDGESSGGKHPSQQKDDGDSQPAAAVAVKV 116
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BLAST of mRNA_E-fasciculatus_F_contig10495.396.1 vs. uniprot
Match: A0A6H5KGG6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGG6_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 1.710e-43
Identity = 93/119 (78.15%), Postives = 100/119 (84.03%), Query Frame = 0 
Query:    1 MATTLSGCWQWWPMRRARRSERETSRGVSHRVKSRFTTVRMPAQVPSAGPAGGGKPHSPSDGGGEEKRTSSASCVVEGAVAGLETVKDGE---GATGKH-APQKDDGDSQPAAAVAVKV 115
            MATTLSGCWQWWPMRRARRSERETSRGVS +VKSRFTT+RMPAQV SAGPAG G+PHSPSDGGG E+ TSS SC   GAVAGLET   GE   GA G+H + QK+DGDSQ AAAVAVKV
Sbjct:    1 MATTLSGCWQWWPMRRARRSERETSRGVSRKVKSRFTTIRMPAQVSSAGPAGRGRPHSPSDGGGGEE-TSSVSCAALGAVAGLETDIIGESSGGAIGRHPSQQKEDGDSQSAAAVAVKV 118
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10495.396.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G9G3_ECTSI2.650e-4876.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KGG6_9PHAE1.710e-4378.15RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10495contigE-fasciculatus_F_contig10495:4114..4704 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10495.396.1mRNA_E-fasciculatus_F_contig10495.396.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10495 3970..4757 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10495.396.1 ID=prot_E-fasciculatus_F_contig10495.396.1|Name=mRNA_E-fasciculatus_F_contig10495.396.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=138bp
MATTLSGCWQWWPMRRARRSERETSRGVSHRVKSRFTTVRMPAQVPSAGP
AGGGKPHSPSDGGGEEKRTSSASCVVEGAVAGLETVKDGEGATGKHAPQK
DDGDSQPAAAVAVKVCVRDRVTGHGRGVAVGSRRRAT*
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