prot_E-fasciculatus_F_contig10021.39.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig10021.39.1
Unique Nameprot_E-fasciculatus_F_contig10021.39.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length189
Homology
BLAST of mRNA_E-fasciculatus_F_contig10021.39.1 vs. uniprot
Match: D8LDR0_ECTSI (COX11 homolog, cytochrome c oxidase assembly protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR0_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 2.060e-100
Identity = 167/192 (86.98%), Postives = 173/192 (90.10%), Query Frame = 0
Query:    1 MLRRAAGHATCKRLLGQPLTPRSAGSTRAISVLLAKQQQH--SVVMASLRRRSQHLQLGHSEWLRRTTGSTSRVAALGVPRSVSRSISAGRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKVGTTL-AGANF 189
            MLRRAAGH+TCKRLLGQP+ PRSAGSTRAISVLLAK  Q   +V+ ASLRRR QH Q GHS WLR TTGST RVA LG PR+ SRSISAGRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVK GTT+ AGA F
Sbjct:    1 MLRRAAGHSTCKRLLGQPVAPRSAGSTRAISVLLAKPPQXXXAVIRASLRRR-QHQQPGHSAWLRGTTGSTCRVAVLGAPRAASRSISAGRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKAGTTMFAGAIF 191          
BLAST of mRNA_E-fasciculatus_F_contig10021.39.1 vs. uniprot
Match: A0A6H5L0W6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W6_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 3.710e-95
Identity = 158/186 (84.95%), Postives = 166/186 (89.25%), Query Frame = 0
Query:    1 MLRRAAGHATCKRLLGQPLTPRSAGSTRAISVLLAKQ--QQHSVVMASLRRRSQHLQLGHSEWLRRTTGSTSRVAALGVPRSVSRSISA---GRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKVG 181
            ML+RAA H+TCKRLLGQP+ PRSAGSTRAISVLLA Q  QQH+V+ ASLRRR QH Q GHS WLR  TGSTSR++ LG PR+ SRSISA   GRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADA KALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVK G
Sbjct:    1 MLKRAASHSTCKRLLGQPVAPRSAGSTRAISVLLANQPKQQHAVIRASLRRR-QHQQPGHSAWLRGMTGSTSRISVLGAPRAASRSISAAAAGRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADAGKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKAG 185          
BLAST of mRNA_E-fasciculatus_F_contig10021.39.1 vs. uniprot
Match: A0A835ZEK6_9STRA (Cytochrome c oxidase assembly protein CtaG/Cox11-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEK6_9STRA)

HSP 1 Score: 115 bits (288), Expect = 4.230e-28
Identity = 58/88 (65.91%), Postives = 68/88 (77.27%), Query Frame = 0
Query:   93 LKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKV 180
            L+ RNRK+A+YM SVV  V GVSYAAVPLYK FCQ TGFGGTTQVA  +K  +M P+   R+I VTFDG  ADTMPW+FR +QS V+V
Sbjct:   44 LRERNRKIAMYMLSVVVGVGGVSYAAVPLYKAFCQATGFGGTTQVATREKTDRMVPLADSRLITVTFDGMVADTMPWRFRQSQSAVRV 131          
BLAST of mRNA_E-fasciculatus_F_contig10021.39.1 vs. uniprot
Match: A0A7R9U5I8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5I8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.030e-27
Identity = 52/88 (59.09%), Postives = 66/88 (75.00%), Query Frame = 0
Query:   93 LKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKV 180
            LK +N +VA+Y++SVV A +G+ YAAVPLYK FCQ+TGFGGTTQ  D   A K+ PVE GR++R+TF G TA T+PW F P Q  V+V
Sbjct:   20 LKRQNERVALYLSSVVIAFIGLGYAAVPLYKAFCQLTGFGGTTQRVDEKTAEKVKPVEDGRLLRITFAGNTASTLPWSFNPLQRSVRV 107          
BLAST of mRNA_E-fasciculatus_F_contig10021.39.1 vs. uniprot
Match: A0A482RTI3_9ARCH (Cytochrome c oxidase assembly protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTI3_9ARCH)

HSP 1 Score: 111 bits (277), Expect = 6.760e-27
Identity = 50/87 (57.47%), Postives = 66/87 (75.86%), Query Frame = 0
Query:   94 KARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKV 180
            K+ N+KVA Y+ +    V G+SYAAVPLYKVFCQ+TGFGGTTQVA+   A K+SP+E GR++++ F     DTMPW F+PTQ +V+V
Sbjct:   40 KSDNKKVAYYLGAATVLVFGLSYAAVPLYKVFCQMTGFGGTTQVAEESSAKKISPIENGRILKIYFTASVHDTMPWSFKPTQREVRV 126          
BLAST of mRNA_E-fasciculatus_F_contig10021.39.1 vs. uniprot
Match: A0A1V9YAD6_9STRA (Cytochrome c oxidase assembly protein COX11, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YAD6_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.860e-25
Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 0
Query:   93 LKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKV 180
            L  +N+++ +Y AS      G +YAAVPLYK+FCQ+TGFGGTTQ +D   A K+SPVEG + IRVTFDGG A +MPW FRP Q D+ +
Sbjct:   31 LDEKNKRILMYTASTALLFFGAAYAAVPLYKIFCQMTGFGGTTQRSDMLTAEKLSPVEGAKPIRVTFDGGVASSMPWSFRPIQRDLVI 118          
BLAST of mRNA_E-fasciculatus_F_contig10021.39.1 vs. uniprot
Match: F0XYP1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYP1_AURAN)

HSP 1 Score: 105 bits (263), Expect = 2.060e-25
Identity = 50/86 (58.14%), Postives = 67/86 (77.91%), Query Frame = 0
Query:   96 RNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKM-SPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKV 180
            RN +V +Y  SVV + LG+ YA+VPLYKVFCQ TGFGGTT+ AD ++A ++ +PVEGGRV+RVTFD   +D++PW F P Q DV++
Sbjct:    2 RNTRVLLYGCSVVVSTLGLCYASVPLYKVFCQTTGFGGTTKRADPEEAARLLAPVEGGRVLRVTFDAHVSDSLPWSFAPAQRDVRL 87          
BLAST of mRNA_E-fasciculatus_F_contig10021.39.1 vs. uniprot
Match: A0A067D8C3_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067D8C3_SAPPC)

HSP 1 Score: 105 bits (263), Expect = 5.180e-25
Identity = 50/88 (56.82%), Postives = 62/88 (70.45%), Query Frame = 0
Query:   93 LKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKV 180
            L  +N+++ +Y AS      G +YAAVPLYK+FCQ+TGFGGTTQ +D   A K+SPVEG   IRVTFDGG A  MPW FRP Q D+ +
Sbjct:   31 LDEKNKRIMLYTASTALLFFGAAYAAVPLYKIFCQMTGFGGTTQRSDILTAEKLSPVEGAHPIRVTFDGGVAGAMPWSFRPIQRDLVI 118          
BLAST of mRNA_E-fasciculatus_F_contig10021.39.1 vs. uniprot
Match: A0A6G0WXN5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXN5_9STRA)

HSP 1 Score: 105 bits (262), Expect = 7.830e-25
Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 0
Query:   92 ELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKV 180
            +LK +N+++  Y + V+    G +YAAVPLYKVFCQ+TGFGGTTQ +D  +A K+SPVEG   IR+TFDGG    MPW F+P Q D+ +
Sbjct:   33 QLKDKNKRILYYTSGVILMCFGAAYAAVPLYKVFCQMTGFGGTTQRSDILRAEKLSPVEGAHPIRITFDGGVGGAMPWAFKPVQRDLII 121          
BLAST of mRNA_E-fasciculatus_F_contig10021.39.1 vs. uniprot
Match: A0A024UCT1_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024UCT1_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.620e-24
Identity = 53/99 (53.54%), Postives = 67/99 (67.68%), Query Frame = 0
Query:   82 SRSISAGRAAELKARNRKVAIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVEGGRVIRVTFDGGTADTMPWKFRPTQSDVKV 180
            S S  A  A +L+ +NR++  Y + VV    G +YAAVPLYKVFCQ+TGFGGTTQ +D   A K+SPVEG   IR+TFDGG    MPW F+P Q D+ +
Sbjct:   25 SMSSKAAYAKQLQEKNRRILYYTSGVVILFFGGAYAAVPLYKVFCQMTGFGGTTQRSDILAAEKLSPVEGAHPIRITFDGGVGGAMPWTFKPVQRDLII 123          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig10021.39.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDR0_ECTSI2.060e-10086.98COX11 homolog, cytochrome c oxidase assembly prote... [more]
A0A6H5L0W6_9PHAE3.710e-9584.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZEK6_9STRA4.230e-2865.91Cytochrome c oxidase assembly protein CtaG/Cox11-d... [more]
A0A7R9U5I8_9STRA1.030e-2759.09Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A482RTI3_9ARCH6.760e-2757.47Cytochrome c oxidase assembly protein n=1 Tax=arch... [more]
A0A1V9YAD6_9STRA1.860e-2556.82Cytochrome c oxidase assembly protein COX11, mitoc... [more]
F0XYP1_AURAN2.060e-2558.14Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A067D8C3_SAPPC5.180e-2556.82Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A6G0WXN5_9STRA7.830e-2553.93Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024UCT1_9STRA1.620e-2453.54Uncharacterized protein n=6 Tax=Aphanomyces TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007533Cytochrome c oxidase assembly protein CtaG/Cox11PFAMPF04442CtaG_Cox11coord: 118..180
e-value: 2.0E-14
score: 53.9
NoneNo IPR availablePANTHERPTHR21320CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATEDcoord: 41..180
NoneNo IPR availablePANTHERPTHR21320:SF3CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11, MITOCHONDRIALcoord: 41..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..119
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
IPR023471Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamilySUPERFAMILY110111Ctag/Cox11coord: 147..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig10021contigE-fasciculatus_F_contig10021:2168..4365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig10021.39.1mRNA_E-fasciculatus_F_contig10021.39.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig10021 2168..4365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig10021.39.1 ID=prot_E-fasciculatus_F_contig10021.39.1|Name=mRNA_E-fasciculatus_F_contig10021.39.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=189bp
MLRRAAGHATCKRLLGQPLTPRSAGSTRAISVLLAKQQQHSVVMASLRRR
SQHLQLGHSEWLRRTTGSTSRVAALGVPRSVSRSISAGRAAELKARNRKV
AIYMASVVTAVLGVSYAAVPLYKVFCQVTGFGGTTQVADADKALKMSPVE
GGRVIRVTFDGGTADTMPWKFRPTQSDVKVGTTLAGANF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023471CtaG/Cox11_dom_sf
IPR007533Cyt_c_oxidase_assmbl_CtaG