mRNA_E-fasciculatus_F_contig15632.3908.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15632.3908.1 vs. uniprot
Match: D7FRT2_ECTSI (EsV-1-164 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT2_ECTSI) HSP 1 Score: 295 bits (756), Expect = 6.540e-93 Identity = 157/224 (70.09%), Postives = 169/224 (75.45%), Query Frame = 1
Query: 1 GSRDPSEVDGVDSAITGVHVQGMVLKNAGKECLRMRYFATNCVVQVNEIGPCGIEDFQQGSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGNVVMNNEIDTQACIPYLPGSEGVDIKEGSYGNVVYGNTISGQMDEETGGISLRGDANIVVDNNVIEGAGTCIRIGGFEEDGVQYGEDNEVYENTLDRCQNSAIKVNESPQLICDNTIDISENPNDDDLVRGE 672
GSRDPSEVDGVDS+ITGV+VQGMVLKNAGKECLR+RYFATNCVVQVNEIGPCGI+DFQQ SDGSNGEGVYIGTALNQIDEKNGDDVVDECTG VVMNNEIDTQ GSEGVDIKE G+GTCIR+GGFEEDGVQYGEDNEVYENTLD C NSA+KVNESPQLICDNT+ ++ +P DD+L GE
Sbjct: 153 GSRDPSEVDGVDSSITGVNVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIQDFQQDSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGIVVMNNEIDTQ-------GSEGVDIKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGTCIRVGGFEEDGVQYGEDNEVYENTLDGCLNSAVKVNESPQLICDNTVILAADPTDDELRGGE 369
BLAST of mRNA_E-fasciculatus_F_contig15632.3908.1 vs. uniprot
Match: A0A0G0AZ49_9BACT (Secreted protein n=1 Tax=Parcubacteria group bacterium GW2011_GWC2_32_10 TaxID=1618918 RepID=A0A0G0AZ49_9BACT) HSP 1 Score: 150 bits (380), Expect = 6.430e-39 Identity = 88/198 (44.44%), Postives = 118/198 (59.60%), Query Frame = 1
Query: 37 SAITGVHVQGMVLKNAGKECLRMRYFATNCVVQVNEIGPCGIEDFQQGSDGSNGEGVYIGTALNQIDEKNGDDVVDECTGNVVMNNEIDTQACIPYLPGSEGVDIKEGSYGNVVYGNTISGQMDEETGGISLRGDANIVVDNNVIEGAGTCIRIGGFEEDGVQYGEDNEVYENTLDRCQNSAIKVNESPQ-LICDNTI 627
+ +TG+ + M +KN+G EC+R++YFA N + N I CGI DF+ + G NGEG+YIGTA Q+ KN +D+ N + NN I T G+EGVDIKEGS GN+V N I GQ D E+GG+ RGD+NI N+V E G IR GG GVQYG++N Y N + + A K+ +PQ IC N +
Sbjct: 166 NGVTGLKITDMNIKNSGGECIRLKYFAQNNEIANNVIQNCGIYDFKFSAGGKNGEGIYIGTAPEQL-SKNPTLDIDKSNNNYIHNNSIQTN-------GNEGVDIKEGSTGNIVEYNIIRGQKDSESGGLDSRGDSNIFRYNDVAESLGAGIRFGGDNYKGVQYGKNNIAYGNKITNNKFGAFKIQATPQGNICGNIL 355
BLAST of mRNA_E-fasciculatus_F_contig15632.3908.1 vs. uniprot
Match: A0A1G2MDL9_9BACT (F5/8 type C domain-containing protein n=1 Tax=Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_49_25 TaxID=1802305 RepID=A0A1G2MDL9_9BACT) HSP 1 Score: 149 bits (375), Expect = 2.250e-38 Identity = 88/189 (46.56%), Postives = 115/189 (60.85%), Query Frame = 1
Query: 67 MVLKNAGKECLRMRYFATNCVVQVNEIGPCGIEDFQQGSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGNVVMNNEIDTQACIPYLPGSEGVDIKEGSYGNVVYGNTISGQMDEETGGISLRGDANIVVDNNVIEGAGTCIRIGGFEEDGVQYGEDNEVYENTLDRCQNSAIKVNESPQ-LICDNTI 627
M LKN+G ECLR+RYFAT + N I CG DF + G NGEG+YIGT+ Q D KN + DE N+V +N IDTQ G+E +DIKEG+ N++ NT GQ D E+GG RGD NI N+V G IR+GG +G+QYG++N+VYENT+ +N I+ +PQ IC NT+
Sbjct: 1 MTLKNSGGECLRLRYFATKSEIAYNTIANCGAYDFLFNAGGKNGEGIYIGTSNKQWGDGKNPTNDPDETKDNLVHHNYIDTQ-------GNECIDIKEGATANIIEYNTCRGQKDSESGGFDSRGDGNIFRYNDVRGSVGGGIRLGGASVNGIQYGKNNDVYENTIVDNKNGGIRFQTTPQGKICGNTM 182
BLAST of mRNA_E-fasciculatus_F_contig15632.3908.1 vs. uniprot
Match: A0A0G1XWI5_9BACT (Beta_helix domain-containing protein n=3 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G1XWI5_9BACT) HSP 1 Score: 145 bits (365), Expect = 5.360e-38 Identity = 93/202 (46.04%), Postives = 116/202 (57.43%), Query Frame = 1
Query: 28 GVDSAITGVHVQGMVLKNAGKECLRMRYFATNCVVQVNEIGPCGIEDFQQGSDGSNGEGVYIGTALNQIDE-KNGDDVVDECTGNVVMNNEIDTQACIPYLPGSEGVDIKEGSYGNVVYGNTISGQMDEETGGISLRGDANIVVDNNVIEGAGTCIRIGGFEEDGVQYGEDNEVYENTLDRCQNSAIKVNESPQ-LICDNTI 627
G +TG+ V M LKNAG EC+R+RYFA + N I CG DF G NGEG+YIGTA Q D+ KN D D GN V N IDTQ G+E VD+KEGS GN+V N +GQ D E+GG+ RG+ NI +N V AG IR+GG E+D G++N+VY NT+ + IKV PQ IC N +
Sbjct: 173 GDGKGVTGLKVLKMSLKNAGGECVRLRYFAQKNEIADNTITGCGAYDFLLDGKGKNGEGIYIGTAPEQTDDGKNPTDERDHSNGNWVHGNTIDTQ-------GNECVDVKEGSSGNLVENNVCTGQKDSESGGLDSRGNGNIFRNNLVYGNAGAGIRLGGDEDDD---GKNNDVYLNTIRDNEGVGIKVQRYPQGKICGNVL 364
BLAST of mRNA_E-fasciculatus_F_contig15632.3908.1 vs. uniprot
Match: A0A0G0APH1_9BACT (Beta_helix domain-containing protein n=2 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G0APH1_9BACT) HSP 1 Score: 144 bits (364), Expect = 1.140e-37 Identity = 86/199 (43.22%), Postives = 118/199 (59.30%), Query Frame = 1
Query: 37 SAITGVHVQGMVLKNAGKECLRMRYFATNCVVQVNEIGPCGIEDFQQGSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGNVVMNNEIDTQACIPYLPGSEGVDIKEGSYGNVVYGNTISGQMDEETGGISLRGDANIVVDNNVIEGAGTCIRIGGFEE-DGVQYGEDNEVYENTLDRCQNSAIKVNESPQLICDNTI 627
+ +TG+ ++ M +KNAG EC+R+RYFAT + N I CG+EDF+ DG NGEG+Y+GTA Q+ D KN D+ N + +N IDTQ G+E VDIKE S GN+V N +GQ D E+ G+ RG N +N + G +R+GG E+ DGV N V +N + +N +KV SPQ+IC NTI
Sbjct: 197 NGVTGLRIKNMNIKNAGGECIRLRYFATKNEIVNNLIENCGVEDFKFDGDGKNGEGIYVGTAPEQLKDGKNPTQDPDQSNENWIHDNVIDTQ-------GNECVDIKEASSGNIVEKNKCTGQKDPESAGLDARGSGNTFRNNQIFGCLGAGVRLGGDEKTDGVN----NVVSDNNIYNNKNGGVKVMRSPQVICGNTI 384
BLAST of mRNA_E-fasciculatus_F_contig15632.3908.1 vs. uniprot
Match: A0A1F7IHP9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_35_13 TaxID=1802055 RepID=A0A1F7IHP9_9BACT) HSP 1 Score: 143 bits (361), Expect = 2.320e-37 Identity = 87/199 (43.72%), Postives = 118/199 (59.30%), Query Frame = 1
Query: 43 ITGVHVQGMVLKNAGKECLRMRYFATNCVVQVNEIGPCGIEDFQQGSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGNVVMNNEIDTQACIPYLPGSEGVDIKEGSYGNVVYGNTISGQMDEETGGISLRGDANIVVDNNVIEGAGTCIRIGGFEE-DGVQYGEDNEVYENTLDRCQNSAIKVNESPQ-LICDNTID 630
+TG+ + M +KNAG EC+R+RYFA N + N I CGI DF+ G NGEG+YIGTA Q+ D KN +DE N++ +N I+TQ G+E VDIKEGS GN+V N +GQ D+E+ G+ RG NI N V G +R+GG E+ DG+ N+VYENT+ + IK +PQ IC N ++
Sbjct: 183 VTGLKILSMNIKNAGGECVRLRYFAQNNEIAYNSINRCGIVDFEFKGGGKNGEGIYIGTAPEQLKDGKNPTSDIDESNNNLIHHNTINTQ-------GNECVDIKEGSSGNIVEYNNCTGQKDKESAGLDSRGSKNIFRYNEVYGNLGAGVRLGGDEDNDGIN----NDVYENTIKNNVSGGIKFQRAPQGKICGNKME 370
BLAST of mRNA_E-fasciculatus_F_contig15632.3908.1 vs. uniprot
Match: A0A1F7I8U6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_37_12 TaxID=1802056 RepID=A0A1F7I8U6_9BACT) HSP 1 Score: 141 bits (355), Expect = 3.010e-37 Identity = 87/199 (43.72%), Postives = 117/199 (58.79%), Query Frame = 1
Query: 43 ITGVHVQGMVLKNAGKECLRMRYFATNCVVQVNEIGPCGIEDFQQGSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGNVVMNNEIDTQACIPYLPGSEGVDIKEGSYGNVVYGNTISGQMDEETGGISLRGDANIVVDNNVIEGAGTCIRIGGFEE-DGVQYGEDNEVYENTLDRCQNSAIKVNESPQ-LICDNTID 630
+TG+ + M +KNAG EC+R+RYFA + N I CG+ DF G NGEGVYIGTA Q+ D KN DE N++ +N I+T G+E VDIKEGS+GN+V N +GQ D+E+GG+ RG+ NI N V +G +R+GG E DG+ N+VYENT+ + IK SPQ IC N ++
Sbjct: 99 VTGLKIMSMSIKNAGGECIRLRYFAQRNEIAYNTIIRCGVSDFSFSGGGKNGEGVYIGTAPEQLKDGKNPTKDRDESNNNLIHHNTINTL-------GNECVDIKEGSWGNIVEYNNCTGQKDKESGGMDSRGNRNIFRFNEVYGNSGAGVRLGGDENSDGIN----NDVYENTIRNNASGGIKFQRSPQGKICGNKME 286
BLAST of mRNA_E-fasciculatus_F_contig15632.3908.1 vs. uniprot
Match: D8LJ29_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ29_ECTSI) HSP 1 Score: 133 bits (335), Expect = 2.630e-34 Identity = 86/202 (42.57%), Postives = 114/202 (56.44%), Query Frame = 1
Query: 31 VDSAITGVHVQGMVLKNAGKECLRMRYFATNCVVQVNEIGPCGIEDFQQGSDGSNGEGVYIGTALNQIDEKNGDDVVDECTG---NVVMNNEIDTQACIPYLPGSEGVDIKEGSYGNVVYGNTISGQMDEETGGISLRGDANIVVDNNVIEGAGTCIRIGGFEEDGVQYGEDNEVYENTLDRCQNSAIKVNESPQ-LICDNT 624
V+SA+ G + G+ ++N G EC+RMR F TN V+Q N+I CGI DF+ DG GE +YIGT+ NQ ++ GD V + G N+V NE+ +P G+E VDIKEG+ NVV N Q D E+G RG+ N N I+ G IR+GG DG YG DN VY N + +IK PQ +ICDN+
Sbjct: 9 VESALIGTVIDGLKIQNCGMECIRMRNFVTNAVIQNNDIENCGIYDFRFQFDGKIGEAIYIGTSSNQWEDGTGDRVTNGPDGSNYNLVTGNEL-----VPR--GNECVDIKEGATMNVVEYNECEDQRDAESGCYDSRGNENTFRYNTAIQCLGAGIRLGGHTIDGFVYGVDNHVYGNEFLETEAGSIKSRVEPQGVICDNS 203
BLAST of mRNA_E-fasciculatus_F_contig15632.3908.1 vs. uniprot
Match: A0A1F7IR59_9BACT (Uncharacterized protein n=1 Tax=Candidatus Roizmanbacteria bacterium RIFCSPLOWO2_01_FULL_38_12 TaxID=1802061 RepID=A0A1F7IR59_9BACT) HSP 1 Score: 132 bits (333), Expect = 3.700e-34 Identity = 85/200 (42.50%), Postives = 112/200 (56.00%), Query Frame = 1
Query: 28 GVDSAITGVHVQGMVLKNAGKECLRMRYFATNCVVQVNEIGPCGIEDFQQGSDGSNGEGVYIGTALNQIDE-KNGDDVVDECTGNVVMNNEIDTQACIPYLPGSEGVDIKEGSYGNVVYGNTISGQMDEETGGISLRGDANIVVDNNVIEGAGTCIRIGGFEEDGVQYGEDNEVYENTLDRCQNSAIKVNESPQ-LICDN 621
G + G+ + M +KNAG EC+R+RY+A N + N I CG D++ G NGEGVYIGTA Q D+ KN + DE GN + +N DTQ G+E VDIKE S N+V N +GQ D E+GG+ RG NI NN+ +G IR+GG D V NEVYEN + + IK+ +PQ +CDN
Sbjct: 78 GQHDGVNGLKILNMTIKNAGGECVRLRYYAQNNEIAYNTITSCGRHDYKFDDGGKNGEGVYIGTAPEQRDDGKNPTNDNDESNGNWIHHNFFDTQ-------GNECVDIKENSKYNIVENNECTGQKDPESGGLDSRGGYNIFRYNNIYGNSGAGIRLGG---DTVDENIMNEVYENIIVNNKKGGIKIMTAPQGKMCDN 267
BLAST of mRNA_E-fasciculatus_F_contig15632.3908.1 vs. uniprot
Match: A0A350ALB2_9CHLR (DUF1565 domain-containing protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A350ALB2_9CHLR) HSP 1 Score: 133 bits (335), Expect = 4.800e-34 Identity = 81/197 (41.12%), Postives = 114/197 (57.87%), Query Frame = 1
Query: 43 ITGVHVQGMVLKNAGKECLRMRYFATNCVVQVNEIGPCGIEDFQQGSDGSNGEGVYIGTALNQI-DEKNGDDVVDECTGNVVMNNEIDTQACIPYLPGSEGVDIKEGSYGNVVYGNTISGQMDEETGGISLRGDANIVVDNNVIEGAGTCIRIGGFEEDGVQYGEDNEVYENTLDRCQNSAIKVNESPQ-LICDNTI 627
+T + + M+LKN+G+E +R+RYFA + + N I CG+ DF+ G NGEG+YIGTA NQ+ D +N + +D+ N + +N IDTQ G+E VDIKEGS GN+V NT SGQ + T G+ RG N+ +N + AG IR+G D G +N+VYEN + + IK PQ +C N I
Sbjct: 124 VTDLRILNMILKNSGEEAVRLRYFAHDNEIAWNTITNCGVYDFKFGGGADNGEGIYIGTAPNQLNDGRNSTNDLDQSDNNWIHHNTIDTQ-------GAECVDIKEGSSGNIVEYNTCSGQQNPNTAGLQSRGTFNVFRNNTIFGNAGAGIRLG---SDMATEGINNDVYENDIHDNNSGGIKFMSQPQGKVCSNRI 310 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15632.3908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15632.3908.1 >prot_E-fasciculatus_F_contig15632.3908.1 ID=prot_E-fasciculatus_F_contig15632.3908.1|Name=mRNA_E-fasciculatus_F_contig15632.3908.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=224bp GSRDPSEVDGVDSAITGVHVQGMVLKNAGKECLRMRYFATNCVVQVNEIGback to top mRNA from alignment at E-fasciculatus_F_contig15632:50..2943- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15632.3908.1 ID=mRNA_E-fasciculatus_F_contig15632.3908.1|Name=mRNA_E-fasciculatus_F_contig15632.3908.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2894bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15632:50..2943- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15632:50..2943- >mRNA_E-fasciculatus_F_contig15632.3908.1 ID=mRNA_E-fasciculatus_F_contig15632.3908.1|Name=mRNA_E-fasciculatus_F_contig15632.3908.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1344bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15632:50..2943- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |