prot_E-fasciculatus_F_contig15558.3869.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15558.3869.1
Unique Nameprot_E-fasciculatus_F_contig15558.3869.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length158
Homology
BLAST of mRNA_E-fasciculatus_F_contig15558.3869.1 vs. uniprot
Match: D7G1G1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G1_ECTSI)

HSP 1 Score: 318 bits (815), Expect = 3.950e-105
Identity = 153/158 (96.84%), Postives = 154/158 (97.47%), Query Frame = 0
Query:    1 MRPGTTLLLHGDLGCEELRIASSSTNALHLNTFGGYISILNTKVTSWSISKGEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQ 158
            MRPGTTLLLH DLGC ELRIASSSTNALHLNTFGGYISILNTKVTSWS+S  EPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQ
Sbjct:  105 MRPGTTLLLHDDLGCTELRIASSSTNALHLNTFGGYISILNTKVTSWSVSNKEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQ 262          
BLAST of mRNA_E-fasciculatus_F_contig15558.3869.1 vs. uniprot
Match: A0A6H5L834_9PHAE (MEP8 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L834_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 2.470e-72
Identity = 104/110 (94.55%), Postives = 107/110 (97.27%), Query Frame = 0
Query:   43 KVTSWSISKGEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQ 152
            +VTSWS+S  EPDAGAYDGSNPRSY+SAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYC DESNPEVFDRVNVRGDIRFSDIHHNWFGQ
Sbjct:    8 QVTSWSVSDKEPDAGAYDGSNPRSYISAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCADESNPEVFDRVNVRGDIRFSDIHHNWFGQ 117          
BLAST of mRNA_E-fasciculatus_F_contig15558.3869.1 vs. uniprot
Match: D7G1G2_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G2_ECTSI)

HSP 1 Score: 212 bits (539), Expect = 3.190e-65
Identity = 104/152 (68.42%), Postives = 114/152 (75.00%), Query Frame = 0
Query:    1 MRPGTTLLLHGDLGCEELRIASSSTNALHLNTFGGYISILNTKVTSWSISKGEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQ 152
            M  GTTLLLH DLGC+                           +TSWS+    PD GAYDG N RS++SAVSEMTHPSDTCDGAADDDAGEAR+DIINS+V YLGYQA+ESYG++YKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQ
Sbjct:   12 MESGTTLLLHDDLGCD---------------------------LTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMDIINSEVAYLGYQASESYGISYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQ 136          
BLAST of mRNA_E-fasciculatus_F_contig15558.3869.1 vs. uniprot
Match: A0A6H5K9I9_9PHAE (MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I9_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 3.800e-45
Identity = 82/156 (52.56%), Postives = 112/156 (71.79%), Query Frame = 0
Query:    4 GTTLLLHGDLGCEELRIASSSTNALHLNTFGGYISILNTKVTSWSISKGEPDAGAYDGSNPRSYMSAVSE-MTHPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQ 158
            G  L LH + G   +R+ S S   + L   GG++S+LNT+++SW + + +    A + S PRSY++A+SE +  P  TC G A +DAGEAR DIINS+V +LG+   E+YG+T+KVRG+C D SN ++FDRVNVRGDIRFSDIHHN+FG Y+YGHQ
Sbjct:  115 GVKLELHAESGTTGMRLKSDS-KVIELRAHGGWLSLLNTELSSWDVDEADY---ASNYSAPRSYVTAISEVLDSPPQTCVGHAKNDAGEARFDIINSEVHHLGHYGTEAYGITWKVRGFCVDLSNEDLFDRVNVRGDIRFSDIHHNYFGMYTYGHQ 266          
BLAST of mRNA_E-fasciculatus_F_contig15558.3869.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 3.620e-44
Identity = 84/159 (52.83%), Postives = 108/159 (67.92%), Query Frame = 0
Query:    4 GTTLLLHGDLG---CEELRIASSSTNALHLNTFGGYISILNTKVTSWSISKGEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQ 158
            G TL +HG       +ELR+ S+S   +HL  +GG +  L+TKV +W  SK  PD    DG   RSY+SAVSE+ T    TC+G A ++ GEAR+DI NS++ YLGY   E+YGLT+KVRG+C D+ NPE+FD VNV G+I  SDIHHN FG Y+YGHQ
Sbjct:   85 GITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDG---RSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQ 240          
BLAST of mRNA_E-fasciculatus_F_contig15558.3869.1 vs. uniprot
Match: A0A6H5KKL2_9PHAE (MEP23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL2_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.610e-43
Identity = 72/95 (75.79%), Postives = 79/95 (83.16%), Query Frame = 0
Query:    1 MRPGTTLLLHGDLGCEELRIASSSTNALHLNTFGGYISILNTKVTSWSISKGEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLD 95
            M  GTTLLLH DLGC+ELRI SSSTNA HL  FG YIS+L TK+TSWS+    PD GAYDG N RS++SAVSEMTHPSDTCDGAADDDAGEAR+D
Sbjct:    7 MESGTTLLLHDDLGCDELRIISSSTNARHLRAFGAYISLLRTKLTSWSVGNRAPDNGAYDGLNARSFISAVSEMTHPSDTCDGAADDDAGEARMD 101          
BLAST of mRNA_E-fasciculatus_F_contig15558.3869.1 vs. uniprot
Match: A0A6H5KES9_9PHAE (MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KES9_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.530e-42
Identity = 77/144 (53.47%), Postives = 102/144 (70.83%), Query Frame = 0
Query:   16 EELRIASSSTNALHLNTFGGYISILNTKVTSWSISKGEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQ 158
            +ELR+ S+S   ++L   GG +  ++TKV SW  S   PD    DG   RSY+SA+SE+ T   +TC+G A +  GEAR+DI +S++GYLGY  +ESYGLT+KVRG+C D+SNPEVFD VNV G++  SDIHH  FG Y+YGHQ
Sbjct:   23 DELRLLSTSETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDG---RSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQ 163          
BLAST of mRNA_E-fasciculatus_F_contig15558.3869.1 vs. uniprot
Match: D7FMJ0_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ0_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 2.300e-42
Identity = 84/159 (52.83%), Postives = 110/159 (69.18%), Query Frame = 0
Query:    4 GTTLLLHG-DLG--CEELRIASSSTNALHLNTFGGYISILNTKVTSWSISKGEPDAGAYDGSNPRSYMSAVSEMTH-PSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQ 158
            G  L +HG D G  C+ELR+ S  T  ++L   GG  S L TKV SW+  KG  D    DG   RSY+SAVSE+ + P+ TC+G A  + GEAR+D+I+S++ +LGY  +ESYGLT+KVRG+C D+SN +VFD VNV GD+  S+IH N+FG YSYGHQ
Sbjct:  422 GVILQVHGTDRGGDCDELRLLSDETTFINLRAHGGSFSFLGTKVVSWNEGKGTVDTNHEDG---RSYISAVSEVIYDPNQTCNGTAKSEMGEARMDVIDSEIAFLGYYESESYGLTWKVRGFCIDKSNLDVFDFVNVYGDMINSNIHDNYFGHYSYGHQ 577          
BLAST of mRNA_E-fasciculatus_F_contig15558.3869.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 7.390e-42
Identity = 84/159 (52.83%), Postives = 110/159 (69.18%), Query Frame = 0
Query:    4 GTTLLLHG-DLG--CEELRIASSSTNALHLNTFGGYISILNTKVTSWSISKGEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQ 158
            G TL ++G D G   +ELR+ S+S   ++L   GG +  + TKV SW  S   PD    DG   RSY+SAVSE+ T   +TC+G A +  GEAR+DI NS++GYLG+Q +ESYGLT+KVRG+C D+SNPE+FD VNV G++  SDIHH  FG Y+YGHQ
Sbjct:  118 GITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDG---RSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQ 273          
BLAST of mRNA_E-fasciculatus_F_contig15558.3869.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 8.910e-42
Identity = 83/159 (52.20%), Postives = 107/159 (67.30%), Query Frame = 0
Query:    4 GTTLLLHGDLG---CEELRIASSSTNALHLNTFGGYISILNTKVTSWSISKGEPDAGAYDGSNPRSYMSAVSEM-THPSDTCDGAADDDAGEARLDIINSDVGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWFGQYSYGHQ 158
            G TL +HG        ELR+ S+S + ++L   GG +  ++TKV +W  SK +      DGS  RSY+SAVSE+ T   + CDG A    GEAR+DI +S++ YLGYQ +ESYGLT+KVRG+C D SNPEVFD VNV G+I  SDIHHN FG Y+YGH+
Sbjct:  114 GITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRT---DGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHE 269          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15558.3869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1G1_ECTSI3.950e-10596.84Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5L834_9PHAE2.470e-7294.55MEP8 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G1G2_ECTSI3.190e-6568.42Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5K9I9_9PHAE3.800e-4552.56MEP6 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
Q7XAJ8_9PHAE3.620e-4452.83Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A0A6H5KKL2_9PHAE1.610e-4375.79MEP23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5KES9_9PHAE1.530e-4253.47MEP22b protein n=1 Tax=Ectocarpus sp. CCAP 1310/34... [more]
D7FMJ0_ECTSI2.300e-4252.83Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI7.390e-4252.83Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE8.910e-4252.20Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 1..158
e-value: 8.7E-33
score: 115.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15558contigE-fasciculatus_F_contig15558:122..2994 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15558.3869.1mRNA_E-fasciculatus_F_contig15558.3869.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15558 95..2994 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15558.3869.1 ID=prot_E-fasciculatus_F_contig15558.3869.1|Name=mRNA_E-fasciculatus_F_contig15558.3869.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=158bp
MRPGTTLLLHGDLGCEELRIASSSTNALHLNTFGGYISILNTKVTSWSIS
KGEPDAGAYDGSNPRSYMSAVSEMTHPSDTCDGAADDDAGEARLDIINSD
VGYLGYQAAESYGLTYKVRGYCTDESNPEVFDRVNVRGDIRFSDIHHNWF
GQYSYGHQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold