prot_E-fasciculatus_F_contig15366.3767.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: D8LND0_ECTSI (Replication factor C subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LND0_ECTSI) HSP 1 Score: 380 bits (975), Expect = 7.550e-123 Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0
Query: 5 GKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSSKMTYMNLKGGISAIEKDK 214
GKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQ VLHALQMWSRKSSKMTYMNLKGGISAIEKDK
Sbjct: 488 GKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQ-VLHALQMWSRKSSKMTYMNLKGGISAIEKDK 696
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A835YT94_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT94_9STRA) HSP 1 Score: 218 bits (554), Expect = 1.930e-63 Identity = 119/219 (54.34%), Postives = 148/219 (67.58%), Query Frame = 0
Query: 12 RAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGG----------------IQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSSKMTYMNLKGGISAIEKDK 214
RA L+SG PG+GK++ AT+VA+ +G+ V E NASDTRSK+S+ E L V+ N VLSF + K++++MDEVDGMGG DRGG + ELI LI ++VPII ICNDRQ KIRSLVNHC D+RF RP K IAKR+K VA+ EG+D+D NAAEML E+ GNDIRQ LHA+QMWSR S M YM +K G+ A+ KDK
Sbjct: 103 RAVLISGPPGIGKTTAATIVAKSLGFEVTEFNASDTRSKKSMEEGLKDVLSNTVLSFGSKAGSKPP------KRVIIMDEVDGMGGGDRGGRNVAEADVQMRLLARSMGELIKLIAITKVPIICICNDRQDTKIRSLVNHCIDMRFKRPVKTMIAKRMKEVAQKEGLDIDLNAAEMLSESVGNDIRQ-CLHAMQMWSRGSRTMAYMEVKDGLGAVSKDK 314
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: F0XZ23_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ23_AURAN) HSP 1 Score: 209 bits (532), Expect = 3.390e-60 Identity = 111/213 (52.11%), Postives = 147/213 (69.01%), Query Frame = 0
Query: 6 KDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSSKM---TYMNLKGGISAIEKDKV 215
K+NPGA+AALLSG PG+GKSS A L+ G+ V+ELNASDTRS R++ E L +G +V+S + +++V+MDE+DG+ GSDRGG Q L+ LIK S PII ICNDRQ K+++L NHC+DLRF RP KVTIAKRV A+A EG+ ++ NAAE+LVE+ GNDIRQ L+ALQMW+ + +Y +K +S I KD +
Sbjct: 170 KENPGAKAALLSGPPGIGKSSMAALLCAARGFDVVELNASDTRSARTVEETLGDALGCQVVSSSFAKKGAAPPSKKRLRRVVIMDEIDGLSGSDRGGSQALVKLIKSSSTPIICICNDRQSAKVKTLANHCFDLRFKRPMKVTIAKRVMAIAMKEGLTIEQNAAELLVESCGNDIRQ-CLNALQMWATSEGEAETCSYTAMKDRLSTISKDAI 381
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A7S2PS30_9STRA (Replication factor C subunit 1 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PS30_9STRA) HSP 1 Score: 209 bits (532), Expect = 9.180e-59 Identity = 114/210 (54.29%), Postives = 148/210 (70.48%), Query Frame = 0
Query: 12 RAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSSK------MTYMNLKGGISAIEKDKV 215
+AALLSG PG+GK++TATL+AR+ G V+ELNASD RSK++L+E L V G++VLSF +K++++MDEVDGMG DR G+ +LI +IK S+VPII ICNDRQ QK+RSLV +C DLR+ RP K TIA+R + +MEGM V+ NAAE + E+ GNDIRQ VL+ LQMWS K +K MTY +LK I KD+V
Sbjct: 637 KAALLSGPPGIGKTTTATLIARQSGRDVLELNASDARSKKALTEALGDVTGSQVLSFANQSSKKHVQP---QKRVIIMDEVDGMGAGDRSGMAQLIQMIKNSKVPIICICNDRQSQKVRSLVQYCLDLRYQRPVKTTIARRAVEIGRMEGMVVEPNAAEAIAESCGNDIRQ-VLNCLQMWSCKKNKGGDSANMTYKDLKDRKGEINKDEV 842
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A7S4IHD5_9STRA (Replication factor C subunit 1 (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IHD5_9STRA) HSP 1 Score: 208 bits (529), Expect = 2.260e-58 Identity = 120/225 (53.33%), Postives = 153/225 (68.00%), Query Frame = 0
Query: 12 RAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSF--TANGXXXXXXXXGF--------RKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRK-----------SSKMTYMNLKGGISAIEKDKV 215
+AALLSG PG+GK++TATLVARE G V+ELNASD RSK+SL+E L V G++VL+F +A G XX +K++++MDEVDGMG DR G+ ELI +IKKS+VPII ICNDRQ QK+RSLV HC DLR+ RP K IA+R V +MEGM V+ NAAE + E+ GND+RQ VL+ LQMWS K ++ +TY LK AI KD++
Sbjct: 654 KAALLSGPPGIGKTTTATLVARESGRDVLELNASDARSKKSLTENLGDVTGSQVLNFAPSAKGGKGKGGXXXXXXXXPPRKQKRVIIMDEVDGMGAGDRSGMSELIAMIKKSKVPIICICNDRQSQKVRSLVAHCLDLRYRRPVKTVIARRAVEVGRMEGMHVEPNAAEAIAESCGNDVRQ-VLNCLQMWSSKKRDGNSDAAAGNNDLTYKGLKDRRDAISKDEM 877
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: B8C9T1_THAPS (Replication factor C subunit 1 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9T1_THAPS) HSP 1 Score: 207 bits (527), Expect = 4.570e-58 Identity = 115/211 (54.50%), Postives = 151/211 (71.56%), Query Frame = 0
Query: 12 RAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSF-TANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRK------SSKMTYMNLKGGISAIEKDKV 215
+AALLSG PG+GK++TATLVARE G ++ELNASD RSK+SLS+ L V G++VL+F T +G +K+ ++MDEVDGMG DR G+ ELI +IK S+VPII ICNDR QK++SLV +C DLRF RP K TI +R + ++EGM+V++NAAE + E+ GNDIRQ VL+ +QMWS K SS +TY +LK S I KD+V
Sbjct: 686 KAALLSGPPGIGKTTTATLVARESGRDLLELNASDARSKKSLSQALGDVTGSQVLNFRTGDGKVKHVA----QKRCIIMDEVDGMGAGDRSGMSELIQMIKNSKVPIICICNDRSSQKMKSLVQYCMDLRFQRPNKKTIGRRAVEIGRVEGMEVEENAAEAMSESCGNDIRQ-VLNCMQMWSCKKNEAGQSSSVTYKDLKDRQSDINKDEV 891
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A812KXV0_9DINO (Replication factor C subunit 1 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KXV0_9DINO) HSP 1 Score: 204 bits (519), Expect = 1.880e-57 Identity = 119/215 (55.35%), Postives = 149/215 (69.30%), Query Frame = 0
Query: 8 NPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTAN----GXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRK----SSKMTYMNLKGGISAIEKDK 214
NPGARA LLSG PG+GKS+ A LVAR +GY V E+NASDTRSKRSL E LA V+GN+ ++F A GXXXXXXXX +Q+V+MDEVDGM DRGG ELI +IK +R PII ICNDRQ +RSL N C DL+F+RP K +AKR+ +A +G+ + NA E LVE +GNDIRQ V H LQMW+ ++T+ +K + +KDK
Sbjct: 347 NPGARAVLLSGPPGIGKSTAALLVARAVGYQVQEMNASDTRSKRSLKETLAEVVGNRAITFFARAPGGGXXXXXXXXXTARQVVIMDEVDGMSSGDRGGNAELIRIIKTTRRPIICICNDRQKSSVRSLANSCLDLKFSRPNKQQVAKRLALIAAEQGLAAEPNALEYLVETSGNDIRQTV-HMLQMWANSPHGADGRLTFAAMKAAEATSQKDK 560
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A7S3JSX2_9STRA (Replication factor C subunit 1 (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSX2_9STRA) HSP 1 Score: 201 bits (511), Expect = 1.270e-56 Identity = 109/191 (57.07%), Postives = 136/191 (71.20%), Query Frame = 0
Query: 6 KDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSS 196
K+NP A+AALLSG PG+GK++ A L+A+E GY V+ELNASD RSK+SL+E+L + L F A K+L++MDEVDG+ GSDRGG QELI LIK SRVPII ICNDRQ K++ L N C+DLR RP K TIAKR+ +A EG+D++ NAAE+L E GNDIRQ L+ALQMWS + S
Sbjct: 298 KENPNAKAALLSGPPGIGKTTLAHLIAKEHGYDVLELNASDARSKKSLTEQLGGTLDCPTLKFGAINAKDMTT-----KRLLIMDEVDGLSGSDRGGSQELIRLIKISRVPIICICNDRQSNKVKGLANSCFDLRCKRPMKQTIAKRIVLIANKEGLDLEANAAELLAENCGNDIRQ-CLNALQMWSTELS 482
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A7S3ZNL0_9STRA (Replication factor C subunit 1 n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNL0_9STRA) HSP 1 Score: 201 bits (510), Expect = 3.990e-56 Identity = 113/210 (53.81%), Postives = 142/210 (67.62%), Query Frame = 0
Query: 8 NPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMW--SRKSSKMTYMNLKGGISAIEKDKV 215
NP ARAALLSG PG+GKS+ A L+ + G+ V+E NASDTRSK+S+ LA +G L G R++ V+MDEVDG+ SDRGG LI LIK + PII ICNDRQ K++SL NHCYDLR RP K +AKR+ AVA EG+ ++ NAAE+LV++ GNDIRQ L+ALQMW S S K TY ++KG ISAI KD++
Sbjct: 412 NPSARAALLSGPPGIGKSTMAALLCEQRGFEVVEYNASDTRSKKSIEGGLADALGCGSLFGKKGGQR--------RRRCVIMDEVDGLSASDRGGSAALIKLIKTTATPIICICNDRQSPKVKSLANHCYDLRCKRPMKQIVAKRLVAVAAAEGLTLEQNAAELLVDSCGNDIRQ-CLNALQMWTQSNASGKATYGDMKGRISAISKDEM 612
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A1Z5JWY4_FISSO (Replication factor C subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWY4_FISSO) HSP 1 Score: 200 bits (509), Expect = 6.690e-56 Identity = 103/204 (50.49%), Postives = 141/204 (69.12%), Query Frame = 0
Query: 12 RAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSSKMTYMNLKGGISAIEKDKV 215
+AALLSG PG+GK++TATLVA+E G V+E NASD RSK++L+ + G++ + FT +K+ ++MDEVDGMG DR G+ ELI +IKKS+VPI+ ICNDRQ QK++SL+ +C DLR+ RP K IA R V + EG++V+ NAAE L E+ GNDIRQ VL+ LQMWSRK + + + +LK + I KD +
Sbjct: 415 KAALLSGPPGIGKTTTATLVAKEAGRDVLEFNASDVRSKKALTNVFGDITGSQTIDFTTQA----------KKRCIIMDEVDGMGAGDRSGMAELIQMIKKSKVPIVCICNDRQSQKLKSLIPYCLDLRYRRPTKNVIANRAVQVGQQEGLNVEQNAAEALAESCGNDIRQ-VLNCLQMWSRKGNSLKFKDLKERANDINKDDI 607 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-fasciculatus_F_contig15366.3767.1 ID=prot_E-fasciculatus_F_contig15366.3767.1|Name=mRNA_E-fasciculatus_F_contig15366.3767.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=217bpback to top |