prot_E-fasciculatus_F_contig15366.3767.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15366.3767.1
Unique Nameprot_E-fasciculatus_F_contig15366.3767.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length217
Homology
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: D8LND0_ECTSI (Replication factor C subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LND0_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 7.550e-123
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0
Query:    5 GKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSSKMTYMNLKGGISAIEKDK 214
            GKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQ VLHALQMWSRKSSKMTYMNLKGGISAIEKDK
Sbjct:  488 GKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQ-VLHALQMWSRKSSKMTYMNLKGGISAIEKDK 696          
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A835YT94_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT94_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.930e-63
Identity = 119/219 (54.34%), Postives = 148/219 (67.58%), Query Frame = 0
Query:   12 RAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGG----------------IQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSSKMTYMNLKGGISAIEKDK 214
            RA L+SG PG+GK++ AT+VA+ +G+ V E NASDTRSK+S+ E L  V+ N VLSF +             K++++MDEVDGMGG DRGG                + ELI LI  ++VPII ICNDRQ  KIRSLVNHC D+RF RP K  IAKR+K VA+ EG+D+D NAAEML E+ GNDIRQ  LHA+QMWSR S  M YM +K G+ A+ KDK
Sbjct:  103 RAVLISGPPGIGKTTAATIVAKSLGFEVTEFNASDTRSKKSMEEGLKDVLSNTVLSFGSKAGSKPP------KRVIIMDEVDGMGGGDRGGRNVAEADVQMRLLARSMGELIKLIAITKVPIICICNDRQDTKIRSLVNHCIDMRFKRPVKTMIAKRMKEVAQKEGLDIDLNAAEMLSESVGNDIRQ-CLHAMQMWSRGSRTMAYMEVKDGLGAVSKDK 314          
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: F0XZ23_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ23_AURAN)

HSP 1 Score: 209 bits (532), Expect = 3.390e-60
Identity = 111/213 (52.11%), Postives = 147/213 (69.01%), Query Frame = 0
Query:    6 KDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSSKM---TYMNLKGGISAIEKDKV 215
            K+NPGA+AALLSG PG+GKSS A L+    G+ V+ELNASDTRS R++ E L   +G +V+S +              +++V+MDE+DG+ GSDRGG Q L+ LIK S  PII ICNDRQ  K+++L NHC+DLRF RP KVTIAKRV A+A  EG+ ++ NAAE+LVE+ GNDIRQ  L+ALQMW+    +    +Y  +K  +S I KD +
Sbjct:  170 KENPGAKAALLSGPPGIGKSSMAALLCAARGFDVVELNASDTRSARTVEETLGDALGCQVVSSSFAKKGAAPPSKKRLRRVVIMDEIDGLSGSDRGGSQALVKLIKSSSTPIICICNDRQSAKVKTLANHCFDLRFKRPMKVTIAKRVMAIAMKEGLTIEQNAAELLVESCGNDIRQ-CLNALQMWATSEGEAETCSYTAMKDRLSTISKDAI 381          
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A7S2PS30_9STRA (Replication factor C subunit 1 n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PS30_9STRA)

HSP 1 Score: 209 bits (532), Expect = 9.180e-59
Identity = 114/210 (54.29%), Postives = 148/210 (70.48%), Query Frame = 0
Query:   12 RAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSSK------MTYMNLKGGISAIEKDKV 215
            +AALLSG PG+GK++TATL+AR+ G  V+ELNASD RSK++L+E L  V G++VLSF              +K++++MDEVDGMG  DR G+ +LI +IK S+VPII ICNDRQ QK+RSLV +C DLR+ RP K TIA+R   + +MEGM V+ NAAE + E+ GNDIRQ VL+ LQMWS K +K      MTY +LK     I KD+V
Sbjct:  637 KAALLSGPPGIGKTTTATLIARQSGRDVLELNASDARSKKALTEALGDVTGSQVLSFANQSSKKHVQP---QKRVIIMDEVDGMGAGDRSGMAQLIQMIKNSKVPIICICNDRQSQKVRSLVQYCLDLRYQRPVKTTIARRAVEIGRMEGMVVEPNAAEAIAESCGNDIRQ-VLNCLQMWSCKKNKGGDSANMTYKDLKDRKGEINKDEV 842          
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A7S4IHD5_9STRA (Replication factor C subunit 1 (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IHD5_9STRA)

HSP 1 Score: 208 bits (529), Expect = 2.260e-58
Identity = 120/225 (53.33%), Postives = 153/225 (68.00%), Query Frame = 0
Query:   12 RAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSF--TANGXXXXXXXXGF--------RKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRK-----------SSKMTYMNLKGGISAIEKDKV 215
            +AALLSG PG+GK++TATLVARE G  V+ELNASD RSK+SL+E L  V G++VL+F  +A G      XX          +K++++MDEVDGMG  DR G+ ELI +IKKS+VPII ICNDRQ QK+RSLV HC DLR+ RP K  IA+R   V +MEGM V+ NAAE + E+ GND+RQ VL+ LQMWS K           ++ +TY  LK    AI KD++
Sbjct:  654 KAALLSGPPGIGKTTTATLVARESGRDVLELNASDARSKKSLTENLGDVTGSQVLNFAPSAKGGKGKGGXXXXXXXXPPRKQKRVIIMDEVDGMGAGDRSGMSELIAMIKKSKVPIICICNDRQSQKVRSLVAHCLDLRYRRPVKTVIARRAVEVGRMEGMHVEPNAAEAIAESCGNDVRQ-VLNCLQMWSSKKRDGNSDAAAGNNDLTYKGLKDRRDAISKDEM 877          
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: B8C9T1_THAPS (Replication factor C subunit 1 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9T1_THAPS)

HSP 1 Score: 207 bits (527), Expect = 4.570e-58
Identity = 115/211 (54.50%), Postives = 151/211 (71.56%), Query Frame = 0
Query:   12 RAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSF-TANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRK------SSKMTYMNLKGGISAIEKDKV 215
            +AALLSG PG+GK++TATLVARE G  ++ELNASD RSK+SLS+ L  V G++VL+F T +G          +K+ ++MDEVDGMG  DR G+ ELI +IK S+VPII ICNDR  QK++SLV +C DLRF RP K TI +R   + ++EGM+V++NAAE + E+ GNDIRQ VL+ +QMWS K      SS +TY +LK   S I KD+V
Sbjct:  686 KAALLSGPPGIGKTTTATLVARESGRDLLELNASDARSKKSLSQALGDVTGSQVLNFRTGDGKVKHVA----QKRCIIMDEVDGMGAGDRSGMSELIQMIKNSKVPIICICNDRSSQKMKSLVQYCMDLRFQRPNKKTIGRRAVEIGRVEGMEVEENAAEAMSESCGNDIRQ-VLNCMQMWSCKKNEAGQSSSVTYKDLKDRQSDINKDEV 891          
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A812KXV0_9DINO (Replication factor C subunit 1 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KXV0_9DINO)

HSP 1 Score: 204 bits (519), Expect = 1.880e-57
Identity = 119/215 (55.35%), Postives = 149/215 (69.30%), Query Frame = 0
Query:    8 NPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTAN----GXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRK----SSKMTYMNLKGGISAIEKDK 214
            NPGARA LLSG PG+GKS+ A LVAR +GY V E+NASDTRSKRSL E LA V+GN+ ++F A     GXXXXXXXX   +Q+V+MDEVDGM   DRGG  ELI +IK +R PII ICNDRQ   +RSL N C DL+F+RP K  +AKR+  +A  +G+  + NA E LVE +GNDIRQ V H LQMW+        ++T+  +K   +  +KDK
Sbjct:  347 NPGARAVLLSGPPGIGKSTAALLVARAVGYQVQEMNASDTRSKRSLKETLAEVVGNRAITFFARAPGGGXXXXXXXXXTARQVVIMDEVDGMSSGDRGGNAELIRIIKTTRRPIICICNDRQKSSVRSLANSCLDLKFSRPNKQQVAKRLALIAAEQGLAAEPNALEYLVETSGNDIRQTV-HMLQMWANSPHGADGRLTFAAMKAAEATSQKDK 560          
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A7S3JSX2_9STRA (Replication factor C subunit 1 (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSX2_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.270e-56
Identity = 109/191 (57.07%), Postives = 136/191 (71.20%), Query Frame = 0
Query:    6 KDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSS 196
            K+NP A+AALLSG PG+GK++ A L+A+E GY V+ELNASD RSK+SL+E+L   +    L F A             K+L++MDEVDG+ GSDRGG QELI LIK SRVPII ICNDRQ  K++ L N C+DLR  RP K TIAKR+  +A  EG+D++ NAAE+L E  GNDIRQ  L+ALQMWS + S
Sbjct:  298 KENPNAKAALLSGPPGIGKTTLAHLIAKEHGYDVLELNASDARSKKSLTEQLGGTLDCPTLKFGAINAKDMTT-----KRLLIMDEVDGLSGSDRGGSQELIRLIKISRVPIICICNDRQSNKVKGLANSCFDLRCKRPMKQTIAKRIVLIANKEGLDLEANAAELLAENCGNDIRQ-CLNALQMWSTELS 482          
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A7S3ZNL0_9STRA (Replication factor C subunit 1 n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNL0_9STRA)

HSP 1 Score: 201 bits (510), Expect = 3.990e-56
Identity = 113/210 (53.81%), Postives = 142/210 (67.62%), Query Frame = 0
Query:    8 NPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMW--SRKSSKMTYMNLKGGISAIEKDKV 215
            NP ARAALLSG PG+GKS+ A L+  + G+ V+E NASDTRSK+S+   LA  +G   L     G          R++ V+MDEVDG+  SDRGG   LI LIK +  PII ICNDRQ  K++SL NHCYDLR  RP K  +AKR+ AVA  EG+ ++ NAAE+LV++ GNDIRQ  L+ALQMW  S  S K TY ++KG ISAI KD++
Sbjct:  412 NPSARAALLSGPPGIGKSTMAALLCEQRGFEVVEYNASDTRSKKSIEGGLADALGCGSLFGKKGGQR--------RRRCVIMDEVDGLSASDRGGSAALIKLIKTTATPIICICNDRQSPKVKSLANHCYDLRCKRPMKQIVAKRLVAVAAAEGLTLEQNAAELLVDSCGNDIRQ-CLNALQMWTQSNASGKATYGDMKGRISAISKDEM 612          
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Match: A0A1Z5JWY4_FISSO (Replication factor C subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWY4_FISSO)

HSP 1 Score: 200 bits (509), Expect = 6.690e-56
Identity = 103/204 (50.49%), Postives = 141/204 (69.12%), Query Frame = 0
Query:   12 RAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSKRSLSEELASVIGNKVLSFTANGXXXXXXXXGFRKQLVVMDEVDGMGGSDRGGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIAKRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSSKMTYMNLKGGISAIEKDKV 215
            +AALLSG PG+GK++TATLVA+E G  V+E NASD RSK++L+     + G++ + FT             +K+ ++MDEVDGMG  DR G+ ELI +IKKS+VPI+ ICNDRQ QK++SL+ +C DLR+ RP K  IA R   V + EG++V+ NAAE L E+ GNDIRQ VL+ LQMWSRK + + + +LK   + I KD +
Sbjct:  415 KAALLSGPPGIGKTTTATLVAKEAGRDVLEFNASDVRSKKALTNVFGDITGSQTIDFTTQA----------KKRCIIMDEVDGMGAGDRSGMAELIQMIKKSKVPIVCICNDRQSQKLKSLIPYCLDLRYRRPTKNVIANRAVQVGQQEGLNVEQNAAEALAESCGNDIRQ-VLNCLQMWSRKGNSLKFKDLKERANDINKDDI 607          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15366.3767.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LND0_ECTSI7.550e-12399.52Replication factor C subunit 1 n=2 Tax=Ectocarpus ... [more]
A0A835YT94_9STRA1.930e-6354.34P-loop containing nucleoside triphosphate hydrolas... [more]
F0XZ23_AURAN3.390e-6052.11AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S2PS30_9STRA9.180e-5954.29Replication factor C subunit 1 n=1 Tax=Skeletonema... [more]
A0A7S4IHD5_9STRA2.260e-5853.33Replication factor C subunit 1 (Fragment) n=2 Tax=... [more]
B8C9T1_THAPS4.570e-5854.50Replication factor C subunit 1 n=1 Tax=Thalassiosi... [more]
A0A812KXV0_9DINO1.880e-5755.35Replication factor C subunit 1 n=1 Tax=Symbiodiniu... [more]
A0A7S3JSX2_9STRA1.270e-5657.07Replication factor C subunit 1 (Fragment) n=1 Tax=... [more]
A0A7S3ZNL0_9STRA3.990e-5653.81Replication factor C subunit 1 n=3 Tax=Pelagomonas... [more]
A0A1Z5JWY4_FISSO6.690e-5650.49Replication factor C subunit 1 n=2 Tax=Fistulifera... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 10..147
e-value: 1.0E-5
score: 35.0
NoneNo IPR availableGENE3D1.10.8.60coord: 144..215
e-value: 2.2E-16
score: 61.3
NoneNo IPR availableGENE3D3.40.50.300coord: 2..143
e-value: 4.1E-36
score: 126.7
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 7..203
NoneNo IPR availablePANTHERPTHR23389:SF6REPLICATION FACTOR C SUBUNIT 1coord: 7..203
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 15..137
e-value: 1.2E-10
score: 41.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15366contigE-fasciculatus_F_contig15366:6..2440 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15366.3767.1mRNA_E-fasciculatus_F_contig15366.3767.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15366 6..2440 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15366.3767.1 ID=prot_E-fasciculatus_F_contig15366.3767.1|Name=mRNA_E-fasciculatus_F_contig15366.3767.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=217bp
PAAQGKDNPGARAALLSGVPGVGKSSTATLVAREMGYHVMELNASDTRSK
RSLSEELASVIGNKVLSFTANGGGGGTTSGGFRKQLVVMDEVDGMGGSDR
GGIQELILLIKKSRVPIIAICNDRQHQKIRSLVNHCYDLRFARPQKVTIA
KRVKAVAKMEGMDVDDNAAEMLVEANGNDIRQQVLHALQMWSRKSSKMTY
MNLKGGISAIEKDKVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR003593AAA+_ATPase