prot_E-fasciculatus_F_contig15352.3762.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15352.3762.1
Unique Nameprot_E-fasciculatus_F_contig15352.3762.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length303
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15352.3762.1 vs. uniprot
Match: D8LGV6_ECTSI (Glycosyl transferase family 2 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV6_ECTSI)

HSP 1 Score: 434 bits (1117), Expect = 2.450e-143
Identity = 255/305 (83.61%), Postives = 267/305 (87.54%), Query Frame = 0 
Query:    1 LCRVATATGVEGVFGVRGWQRTQDAPRPKRQRRGLLVEAGNVVGGEPRRGVPEPAQP-AQPESAQPEPGGRRRSLLKAFQRTGRDE-PWQFVGGAGAGAGGDDGAGLVEVDALTDALFVRGAHLRHACALLRNAGTSGRATSRRLPMSYAGDGSKDGTRSDFVDGQREEXXXXXXXXXXXXXXXXEISPDRHRRRRATTMAKTTGNEAAAANSAMSFMKLPAVSYVLRKTLGVRSYASSELLPWGGPDGGKVRWSWGGGKGDDNLGNFEASVPGSQFLPWECLSRSGLEPVLLSVTDLRDLRAIK 303
            L R A ATGVEGVFGVRGWQRTQDAPRPKRQRRGLLV++G VVGGEPRR  PEPAQP  +PE      GG RRSLLKAF+RTGRDE PWQFVGGAGAGA  + GAGLVEVDALTDALFVRG HLRHACALLRNAGTSGRA  RRL +S AGDG ++ T SDFVDGQR+ XXXXXXXXXXXXX    ISPDR RRR   TMAKTTGNEAA  NSA+SFMKLPAVSYVLRKTLGVRSYASSELLPWGGPDGGKVRWSWGGGKGDDNLG+FEASVPGS+FLPWECLSRSGLEPVLLSVTDLRDLRAIK
Sbjct:  335 LSRAAAATGVEGVFGVRGWQRTQDAPRPKRQRRGLLVQSGGVVGGEPRRDAPEPAQPDGEPEGETA--GGGRRSLLKAFKRTGRDEKPWQFVGGAGAGA--ETGAGLVEVDALTDALFVRGTHLRHACALLRNAGTSGRAAGRRLGVSSAGDGGEEET-SDFVDGQRQXXXXXXXXXXXXXXG---ISPDRRRRR--ATMAKTTGNEAA--NSAISFMKLPAVSYVLRKTLGVRSYASSELLPWGGPDGGKVRWSWGGGKGDDNLGSFEASVPGSEFLPWECLSRSGLEPVLLSVTDLRDLRAIK 627
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BLAST of mRNA_E-fasciculatus_F_contig15352.3762.1 vs. uniprot
Match: A0A6H5KY98_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY98_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 4.100e-123
Identity = 239/327 (73.09%), Postives = 254/327 (77.68%), Query Frame = 0 
Query:    1 LCRVATATGVEGVFGVRGWQRTQDAPRPKRQRRGLLVEAGNVVGGEPRRGVPEPAQP-AQPESAQPEPGGRRRSLLKAFQRTGRDE-PWQFVGGAGAGAGGDDGAGLVEVDALTDALFVRGAHLRHACALLRNAGTSGRATSRRLPMSYAGDGSKDGTRSDFVDGQREEXXXXXXXXXXXXXXXXEISPDRHRRRRA----------------------TTMAKTTGNEAAAANSAMSFMKLPAVSYVLRKTLGVRSYASSELLPWGGPDGGKVRWSWGGGKGDDNLGNFEASVPGSQFLPWECLSRSGLEPVLLSVTDLRDLRAIK 303
            L R A+ATGV GVFGVRGWQRTQDAPRPKRQRRGLL+++G  VGGEPR  VPEPAQP  +PE      GGR R LLKAF+RT RDE PW FVGGA AGA  D  A LVEVDALTDALFVRGAHLRHACALLR+AGTSGRAT RRL +S AGDG ++ TR  +VDGQ + XXXXXXXXXXXXXXXX                                   TMAKTTGNEAA  NSAMSFMKLPAVSYVLRKTLGVRSYASSELLPWGGPDGGKVRWSWGGGKGD+NLG+FEASVPGS FLPWECLSRSGLEPVLLSVTDL+DLRAIK
Sbjct:  314 LYRAASATGVGGVFGVRGWQRTQDAPRPKRQRRGLLIQSGGGVGGEPRSDVPEPAQPDGEPEGETA--GGRGRRLLKAFKRTRRDENPWHFVGGASAGAKAD--ASLVEVDALTDALFVRGAHLRHACALLRSAGTSGRATGRRLRVSSAGDGGEEETRG-YVDGQSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATMAKTTGNEAA--NSAMSFMKLPAVSYVLRKTLGVRSYASSELLPWGGPDGGKVRWSWGGGKGDENLGSFEASVPGSGFLPWECLSRSGLEPVLLSVTDLKDLRAIK 633
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15352.3762.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGV6_ECTSI2.450e-14383.61Glycosyl transferase family 2 protein n=1 Tax=Ecto... [more]
A0A6H5KY98_9PHAE4.100e-12373.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 161..181

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15352contigE-fasciculatus_F_contig15352:147..3024 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15352.3762.1mRNA_E-fasciculatus_F_contig15352.3762.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15352 147..3024 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15352.3762.1 ID=prot_E-fasciculatus_F_contig15352.3762.1|Name=mRNA_E-fasciculatus_F_contig15352.3762.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=303bp
LCRVATATGVEGVFGVRGWQRTQDAPRPKRQRRGLLVEAGNVVGGEPRRG
VPEPAQPAQPESAQPEPGGRRRSLLKAFQRTGRDEPWQFVGGAGAGAGGD
DGAGLVEVDALTDALFVRGAHLRHACALLRNAGTSGRATSRRLPMSYAGD
GSKDGTRSDFVDGQREEEEEEEDEIKQEQEQEGEISPDRHRRRRATTMAK
TTGNEAAAANSAMSFMKLPAVSYVLRKTLGVRSYASSELLPWGGPDGGKV
RWSWGGGKGDDNLGNFEASVPGSQFLPWECLSRSGLEPVLLSVTDLRDLR
AIK
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