mRNA_E-fasciculatus_F_contig15257.3710.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15257.3710.1 vs. uniprot
Match: D8LCV8_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCV8_ECTSI) HSP 1 Score: 314 bits (805), Expect = 2.060e-108 Identity = 150/153 (98.04%), Postives = 152/153 (99.35%), Query Frame = 1
Query: 1 ELNKNPPEGVSVGLTDDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVRKSQDAL 459
ELNKNPPEGVSVGL +DDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTF+SEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVRKSQDAL
Sbjct: 15 ELNKNPPEGVSVGLANDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFISEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVRKSQDAL 167
BLAST of mRNA_E-fasciculatus_F_contig15257.3710.1 vs. uniprot
Match: A0A836CP86_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP86_9STRA) HSP 1 Score: 262 bits (670), Expect = 7.850e-88 Identity = 121/153 (79.08%), Postives = 137/153 (89.54%), Query Frame = 1
Query: 1 ELNKNPPEGVSVGLTDDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVRKSQDAL 459
ELN+NPPEGVSVGL DD N++ WELLIVGP DTLYE G FKA LEFPKDFPN+PPTMTF S+M+HPNVY DGRVCISILHPPGED+FN+QETAEERWRPILGVE II+SV+SMLSDPNDESPANIDAAV WR++R+AFKK+ R VRKS + +
Sbjct: 15 ELNRNPPEGVSVGLVDDSNIYQWELLIVGPPDTLYEEGLFKATLEFPKDFPNSPPTMTFTSDMWHPNVYEDGRVCISILHPPGEDRFNDQETAEERWRPILGVESIIMSVISMLSDPNDESPANIDAAVQWRSERDAFKKRVRKCVRKSHEDM 167
BLAST of mRNA_E-fasciculatus_F_contig15257.3710.1 vs. uniprot
Match: A0A4D9D8W7_9STRA (UBC core domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8W7_9STRA) HSP 1 Score: 261 bits (667), Expect = 2.170e-87 Identity = 124/153 (81.05%), Postives = 137/153 (89.54%), Query Frame = 1
Query: 1 ELNKNPPEGVSVGLTDDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVRKSQDAL 459
ELNKNPPEGVSVGL DD ++F WELL+VGPADTLYEGGFFKA+L FP DFPN PPTMTF +EM+HPNVY DGRVCISILHPPGED+FN QE+A+ERWRPILGVE IIVSV+SMLSDPNDESPANIDAAV WRNDR FKK+ R +VRKSQ+ L
Sbjct: 15 ELNKNPPEGVSVGLVDD-SVFEWELLLVGPADTLYEGGFFKARLTFPSDFPNMPPTMTFQTEMWHPNVYEDGRVCISILHPPGEDRFNSQESADERWRPILGVEAIIVSVISMLSDPNDESPANIDAAVQWRNDRAGFKKRVRAVVRKSQEDL 166
BLAST of mRNA_E-fasciculatus_F_contig15257.3710.1 vs. uniprot
Match: A0A067CW50_SAPPC (UBC core domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CW50_SAPPC) HSP 1 Score: 257 bits (656), Expect = 1.030e-85 Identity = 115/153 (75.16%), Postives = 139/153 (90.85%), Query Frame = 1
Query: 1 ELNKNPPEGVSVGLTDDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVRKSQDAL 459
EL++NPPEGVSVGL DD+N+F WE+++VGP DTLYEGGFF+A+LEFPKDFPN PP MTF+S+M+HPNVYP G VCISILHPPGED+ N QE+A+ERWRPILGVE I+VSV+SMLSDPND+SPANIDAAV WRND++AFKK+ R +VRKSQ+ +
Sbjct: 14 ELSRNPPEGVSVGLGDDENIFHWEIMLVGPPDTLYEGGFFRARLEFPKDFPNMPPKMTFISDMWHPNVYPSGVVCISILHPPGEDQMNAQESADERWRPILGVESILVSVISMLSDPNDDSPANIDAAVEWRNDKDAFKKRCRRIVRKSQEDI 166
BLAST of mRNA_E-fasciculatus_F_contig15257.3710.1 vs. uniprot
Match: A0A024UPR9_9STRA (UBC core domain-containing protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UPR9_9STRA) HSP 1 Score: 254 bits (649), Expect = 1.200e-84 Identity = 116/153 (75.82%), Postives = 137/153 (89.54%), Query Frame = 1
Query: 1 ELNKNPPEGVSVGLTDDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVRKSQDAL 459
EL++NPPEGVSVGL DD+N+F WE+++VGP DTLYEG FFKA+LEFPKDFPN PP MTFVSEM+HPNVYP+G VCISILHPPGED+ N QE+A+ERWRPILGVE I+VSV+SMLSDPND+SPANIDAAV WR ++EAFKK R +VRKSQ+ +
Sbjct: 14 ELSRNPPEGVSVGLGDDENLFNWEIMLVGPPDTLYEGAFFKARLEFPKDFPNMPPKMTFVSEMWHPNVYPNGVVCISILHPPGEDRMNAQESADERWRPILGVEAILVSVISMLSDPNDDSPANIDAAVEWRTNKEAFKKHCRRIVRKSQEDI 166
BLAST of mRNA_E-fasciculatus_F_contig15257.3710.1 vs. uniprot
Match: A0A1Z5JLS8_FISSO (Ubiquitin-conjugating enzyme E2 G1 n=7 Tax=Bacillariophyta TaxID=2836 RepID=A0A1Z5JLS8_FISSO) HSP 1 Score: 252 bits (643), Expect = 1.020e-83 Identity = 119/151 (78.81%), Postives = 134/151 (88.74%), Query Frame = 1
Query: 1 ELNKNPPEGVSVGLTDDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVRKSQD 453
+L KNP + VSVGL DD N++ WE+LI+GP TLYEGGFFKAKL FP DFPN PPTMTF SEM+HPNVY DGRVCISILHPPGED+FN+QE+AEERWRPILGVE I+VSV+SMLSDPNDESPAN+DAAVMWRNDR AFKKK R +VRKSQ+
Sbjct: 15 DLAKNPIDLVSVGLVDDSNVYEWEILIMGPDGTLYEGGFFKAKLVFPPDFPNMPPTMTFTSEMWHPNVYTDGRVCISILHPPGEDEFNQQESAEERWRPILGVEQILVSVISMLSDPNDESPANLDAAVMWRNDRAAFKKKVRQVVRKSQE 165
BLAST of mRNA_E-fasciculatus_F_contig15257.3710.1 vs. uniprot
Match: A0A8K1CH94_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CH94_PYTOL) HSP 1 Score: 252 bits (643), Expect = 1.060e-83 Identity = 114/153 (74.51%), Postives = 135/153 (88.24%), Query Frame = 1
Query: 1 ELNKNPPEGVSVGLTDDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVRKSQDAL 459
E++KNPPEGVSVGL DD+N+F WE+L++GP DTLYEGGFFKA LEFP +FPN PP MTF SEM+HPNVYP+G VCISILHPPGED+ N+ ETA+ERWRPILGVE I+VSV+SMLSDPND+SPANIDAAV WRND++ FKK R +VRKSQ+ +
Sbjct: 16 EMSKNPPEGVSVGLGDDENIFRWEILLIGPPDTLYEGGFFKAVLEFPPNFPNMPPKMTFTSEMWHPNVYPNGIVCISILHPPGEDQLNQHETADERWRPILGVEAILVSVISMLSDPNDDSPANIDAAVEWRNDKDGFKKHCRRIVRKSQEDI 168
BLAST of mRNA_E-fasciculatus_F_contig15257.3710.1 vs. uniprot
Match: A0A7S2AVY1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AVY1_9STRA) HSP 1 Score: 252 bits (643), Expect = 1.430e-83 Identity = 116/153 (75.82%), Postives = 135/153 (88.24%), Query Frame = 1
Query: 1 ELNKNPPEGVSVGLTDDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVRKSQDAL 459
+LN+NPP+GVSVGL DDDN+ +WE++++GP++T+YEGGFFKA LEFP DFPN PP M FVSEM+HPNVY DGRVCISILHPPGEDK+N QETAEERWRPILGVE II+SV+SML DPNDESPANIDAAVM R DR AFKKK R VRKS++ +
Sbjct: 25 DLNRNPPDGVSVGLVDDDNIMIWEIMLIGPSETMYEGGFFKATLEFPPDFPNMPPEMRFVSEMWHPNVYADGRVCISILHPPGEDKYNAQETAEERWRPILGVEQIILSVMSMLGDPNDESPANIDAAVMLREDRPAFKKKVRQCVRKSEEDM 177
BLAST of mRNA_E-fasciculatus_F_contig15257.3710.1 vs. uniprot
Match: H3GA22_PHYRM (UBC core domain-containing protein n=21 Tax=Oomycota TaxID=4762 RepID=H3GA22_PHYRM) HSP 1 Score: 251 bits (640), Expect = 1.760e-83 Identity = 115/152 (75.66%), Postives = 134/152 (88.16%), Query Frame = 1
Query: 4 LNKNPPEGVSVGLTDDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVRKSQDAL 459
+++NPPEGVSVGL DD+N+F WE+L+VGP DTLYEGGFFKA LEFP DFPN PP MTF SEM+HPNVYP+G VCISILHPPGED N+QETA+ERWRPILGVE I+VSV+SMLSDPND+SPANIDAAV WR+D+E FKK R +VRKSQ+ +
Sbjct: 1 MSRNPPEGVSVGLGDDENIFNWEILLVGPPDTLYEGGFFKAGLEFPSDFPNMPPKMTFKSEMWHPNVYPNGVVCISILHPPGEDHLNQQETADERWRPILGVESILVSVISMLSDPNDDSPANIDAAVEWRSDKEGFKKHCRRIVRKSQEDI 152
BLAST of mRNA_E-fasciculatus_F_contig15257.3710.1 vs. uniprot
Match: A0A7S0XFZ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XFZ8_9STRA) HSP 1 Score: 245 bits (626), Expect = 3.970e-81 Identity = 112/147 (76.19%), Postives = 129/147 (87.76%), Query Frame = 1
Query: 1 ELNKNPPEGVSVGLTDDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFPNNPPTMTFVSEMFHPNVYPDGRVCISILHPPGEDKFNEQETAEERWRPILGVEGIIVSVVSMLSDPNDESPANIDAAVMWRNDREAFKKKSRLLVR 441
+L++NPP+GVSVGL +DDN+F WE++IVGP DTLYEGG FKA L+FP+DFPNNPP M F S M+HPNV+ DG+VCISILHPPG D FNEQETAEERWRPILGVE II+SV+SMLSDPND SPANIDAAVMWRND+ FKKK R +VR
Sbjct: 21 DLSRNPPDGVSVGLREDDNIFHWEVMIVGPPDTLYEGGLFKATLDFPEDFPNNPPVMAFTSAMWHPNVFADGKVCISILHPPGVDHFNEQETAEERWRPILGVESIILSVISMLSDPNDSSPANIDAAVMWRNDKNNFKKKVRDIVR 167 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15257.3710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15257.3710.1 >prot_E-fasciculatus_F_contig15257.3710.1 ID=prot_E-fasciculatus_F_contig15257.3710.1|Name=mRNA_E-fasciculatus_F_contig15257.3710.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=154bp ELNKNPPEGVSVGLTDDDNMFMWELLIVGPADTLYEGGFFKAKLEFPKDFback to top mRNA from alignment at E-fasciculatus_F_contig15257:460..2775- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15257.3710.1 ID=mRNA_E-fasciculatus_F_contig15257.3710.1|Name=mRNA_E-fasciculatus_F_contig15257.3710.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2316bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15257:460..2775- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15257:460..2775- >mRNA_E-fasciculatus_F_contig15257.3710.1 ID=mRNA_E-fasciculatus_F_contig15257.3710.1|Name=mRNA_E-fasciculatus_F_contig15257.3710.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=924bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15257:460..2775- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |