mRNA_E-fasciculatus_F_contig1522.3692.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1522.3692.1 vs. uniprot
Match: D7G6T5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T5_ECTSI) HSP 1 Score: 207 bits (526), Expect = 5.040e-60 Identity = 114/197 (57.87%), Postives = 130/197 (65.99%), Query Frame = 1
Query: 13 IIPTALTVGMLKYRPCLKASYDPSLDCFRVWMHGIFPSFVLAVIVYTWHLTQPYYVSGATHFAWIFSEVLEPLAVVPQLLVSRGSTDAGQLGWTYVILMGIYPPLCVLSWVDTGRHYHFRAHYPFFYAAGIVQTGMYLMFLVTRRVRASPHSPPDETGPVDTMDSTSSARDRLLRDQDSDTDSSPNRERGLDGELRG 603
II TALT+GM KYRP LKASYD SL PY + +F W FSEVLEPLA+VPQLLV RGSTDAG+L WTYV LMG Y +L+WV + + H+P YAAGI+QTGMYLMFLV R VR SPH PPDETG VD M+ TSSAR+RLL DQD+DT+ S NRERGLDGE+ G
Sbjct: 33 IILTALTIGMFKYRPSLKASYDASL---------------------------PYSQTSLVNFLWTFSEVLEPLALVPQLLVFRGSTDAGRLAWTYVTLMGAYRAFYILNWVYRSHYEYGYIHHPLVYAAGIIQTGMYLMFLVDRGVRVSPHLPPDETGDVDIMEPTSSARERLLPDQDTDTEPSRNRERGLDGEVHG 202
BLAST of mRNA_E-fasciculatus_F_contig1522.3692.1 vs. uniprot
Match: D7FRR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR1_ECTSI) HSP 1 Score: 148 bits (374), Expect = 1.000e-38 Identity = 83/149 (55.70%), Postives = 92/149 (61.74%), Query Frame = 1
Query: 13 IIPTALTVGMLKYRPCLKASYDPSLDCFRVWMHGIFPSFVLAVIVYTWHLTQPYYVSGATHFAWIFSEVLEPLAVVPQLLVSRGSTDAGQLGWTYVILMGIYPPLCVLSWVDTGRHYHFRAHYPFFYAAGIVQTGMYLMFLVTRRVRAS 459
I T LT+GMLK RP LKASYD SL YY+ G FAW FSEVLEPLAVVPQLLV RGSTDAG+LGWTYV LMG Y L +L+WV + + H+P YAAGIVQTGMYLMFLV RRVR +
Sbjct: 69 IFLTGLTIGMLKSRPSLKASYDASLH---------------------------YYLPGVLRFAWNFSEVLEPLAVVPQLLVFRGSTDAGRLGWTYVTLMGAYRALYILNWVYLSYNDYAYRHHPLVYAAGIVQTGMYLMFLVDRRVRCA 190
BLAST of mRNA_E-fasciculatus_F_contig1522.3692.1 vs. uniprot
Match: D8LJM2_ECTSI (PGPS/D6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM2_ECTSI) HSP 1 Score: 90.5 bits (223), Expect = 3.820e-17 Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = 1
Query: 22 TALTVGMLKYRPCLKASYDPSLDCFRVWMHGIFPSFVLAVIVYTWH---LTQPYYVSGATHFAWIFSEVLEPLAVVPQLLVSRGSTDAGQLGWTYVILMGIYPPLCVLSWVDTGRHYHFRAHYPFFYAAGIVQTGMYLMF 432
T+L + M++ +KA+YD S D F W + P L +++++W ++ P+ S +F W FSEVLEP A+VPQL+V + + L YV L+G Y L +++WV + H+ Y AG+VQT +Y F
Sbjct: 71 TSLIIYMIREHIPIKATYDKSQDSFLHWQFAVAPCAALGLLIHSWSWWTVSMPF--SSLINFFWTFSEVLEPFAIVPQLMVLQRYREVENLTGHYVFLLGAYRSLYIVNWVYRAHYEAGYQHHVLVYIAGLVQTLLYADF 208
BLAST of mRNA_E-fasciculatus_F_contig1522.3692.1 vs. uniprot
Match: A0A7S2XZQ8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZQ8_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.690e-13 Identity = 49/140 (35.00%), Postives = 70/140 (50.00%), Query Frame = 1
Query: 13 IIPTALTVGMLKYRPCLKASYDPSLDCFRVWMHGIFPSFVLAVIVYTWHLTQPYYVSGATHFAWIFSEVLEPLAVVPQLLVSRGSTDAGQLGWTYVILMGIYPPLCVLSWVDTGRHYHFRAHYPFFYAAGIVQTGMYLMF 432
I T+ + M++ P KA+YD D F + P VLA+I +L Q + T WIFS LE A++PQL+V + + L YV L+G Y L +++WV H H YAAG+VQT +Y+ F
Sbjct: 70 ISSTSYIIYMMRMLPTYKATYDKDQDSFLHIYFAVVPCLVLALIT---NLVQGF---DFTEMLWIFSIYLEATAIIPQLVVLQRYREVENLTGNYVFLLGCYRALYIMNWVYRAYHEAHYRHSYVAYAAGVVQTALYVDF 203
BLAST of mRNA_E-fasciculatus_F_contig1522.3692.1 vs. uniprot
Match: A0A6A6E844_9PEZI (Uncharacterized protein n=1 Tax=Zopfia rhizophila CBS 207.26 TaxID=1314779 RepID=A0A6A6E844_9PEZI) HSP 1 Score: 59.7 bits (143), Expect = 4.570e-6 Identity = 35/115 (30.43%), Postives = 58/115 (50.43%), Query Frame = 1
Query: 97 RVWMHGIFPSFVLAVIVYTWHLTQPYYVSGATHFA---WIFSEVLEPLAVVPQLLVSRGSTDAGQLGWTYVILMGIYPPLCVLSWVDTGRHYHFRAHYPFFYAAGIVQTGMYLMF 432
+ W GI+ VI W+L +V G + F W+FSE+LE + V+PQLL+ R +T L Y++ +G Y L +L+W+ + + P + G +QT + + F
Sbjct: 100 KAWKFGIYCLLASVVIAPFWYLIFKKWVVGKSLFLKLLWVFSEILESVCVIPQLLLLRQTTVPTVLDSFYLVTLGTYRFLYILNWIVRSANEGSKYKDPTSWVWGTIQTALMIDF 214
BLAST of mRNA_E-fasciculatus_F_contig1522.3692.1 vs. uniprot
Match: A0A8E2JCD6_9PEZI (ER lumen protein retaining receptor n=1 Tax=Lepidopterella palustris CBS 459.81 TaxID=1314670 RepID=A0A8E2JCD6_9PEZI) HSP 1 Score: 58.5 bits (140), Expect = 1.030e-5 Identity = 36/117 (30.77%), Postives = 58/117 (49.57%), Query Frame = 1
Query: 97 RVWMHGIFPSFVLAVIVYTWHLTQPYYVSGATHFA---WIFSEVLEPLAVVPQLLVSRGSTDAGQLGWTYVILMGIYPPLCVLSWVDTGRHYHFRAHY--PFFYAAGIVQTGMYLMF 432
+ W GI+ + A++ W L Y+ G F W FSE+LE + V+PQLL+ R +T + Y++ +G Y L +L+W+ G HY P + G +QT + + F
Sbjct: 102 KAWKFGIYCAGGSAILAPFWFLIFKKYILGTNWFLQILWTFSEILESVCVIPQLLLLRQTTVPTVIDSFYLVTLGTYRFLYILNWIVRGAT---EKHYIDPTSWVFGTIQTALMIDF 215
BLAST of mRNA_E-fasciculatus_F_contig1522.3692.1 vs. uniprot
Match: A0A2G5B5G3_COERN (ER lumen protein retaining receptor n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5B5G3_COERN) HSP 1 Score: 57.0 bits (136), Expect = 1.060e-5 Identity = 44/129 (34.11%), Postives = 62/129 (48.06%), Query Frame = 1
Query: 43 LKYRPCLKASYDPSLDCFRVWMHGIFPSFVLAVIVYTWHLTQPYYVSGATHFAWIFSEVLEPLAVVPQLLVSRGSTDAGQLGWTYVILMGIYPPLCVLSWVDTGRHYHFRAHYPFF--YAAGIVQTGMY 423
L Y P LKASYD SLD FRV F + V + + + + W FS LE LA++PQL + +A + YV +G Y L +L+W Y+ +Y + + AGIVQT +Y
Sbjct: 77 LMYSP-LKASYDKSLDSFRVEYIIAFAAVVALAFPHKYSVVE---------VLWSFSIYLESLAIIPQLFQMTRTGEADNITSHYVFALGGYRALYMLNWF---YRYYTEDNYVDYISWIAGIVQTALY 192
BLAST of mRNA_E-fasciculatus_F_contig1522.3692.1 vs. uniprot
Match: A0A8E2EYT9_9PEZI (Uncharacterized protein n=1 Tax=Glonium stellatum TaxID=574774 RepID=A0A8E2EYT9_9PEZI) HSP 1 Score: 58.2 bits (139), Expect = 1.360e-5 Identity = 33/115 (28.70%), Postives = 58/115 (50.43%), Query Frame = 1
Query: 97 RVWMHGIFPSFVLAVIVYTWHLTQPYYVSGAT---HFAWIFSEVLEPLAVVPQLLVSRGSTDAGQLGWTYVILMGIYPPLCVLSWVDTGRHYHFRAHYPFFYAAGIVQTGMYLMF 432
+ W G++ A++ W+L YV+G + W+FSE+LE + V+PQLL+ R +T + Y++ +G Y L +L+W+ H P + G +QT + + F
Sbjct: 100 KAWKFGVYCFVGSAILTPIWYLIFKKYVTGISTTLKVLWVFSEILESVCVIPQLLLLRQTTVPTVIDSFYLVTLGTYRFLYILNWITRSATEHDYKD-PTSWTFGTIQTALIIDF 213
BLAST of mRNA_E-fasciculatus_F_contig1522.3692.1 vs. uniprot
Match: UPI001B3796ED (uncharacterized protein n=1 Tax=Cucurbitaria berberidis CBS 394.84 TaxID=1168544 RepID=UPI001B3796ED) HSP 1 Score: 58.2 bits (139), Expect = 1.420e-5 Identity = 35/115 (30.43%), Postives = 60/115 (52.17%), Query Frame = 1
Query: 97 RVWMHGIFPSFVLAVIVYTWHLTQPYYVSGATHFA---WIFSEVLEPLAVVPQLLVSRGSTDAGQLGWTYVILMGIYPPLCVLSWVDTGRHYHFRAHYPFFYAAGIVQTGMYLMF 432
+ W G++ V+ W+L ++V G + F W+FSE+LE + VVPQLL+ R +T + Y++ +G Y + VL+W+ G + A P + G +QT + + F
Sbjct: 97 KAWKFGMYGLLGSVVVAPFWYLLFKHWVIGHSTFLKMLWVFSEILESVCVVPQLLLLRQTTVPTVIDSFYLVTLGTYRFMYVLNWIVRGANEKSYAD-PTSWVWGSIQTALMIDF 210
BLAST of mRNA_E-fasciculatus_F_contig1522.3692.1 vs. uniprot
Match: A0A2T2NHL9_CORCC (ER lumen protein retaining receptor n=1 Tax=Corynespora cassiicola Philippines TaxID=1448308 RepID=A0A2T2NHL9_CORCC) HSP 1 Score: 57.8 bits (138), Expect = 1.850e-5 Identity = 35/115 (30.43%), Postives = 59/115 (51.30%), Query Frame = 1
Query: 97 RVWMHGIFPSFVLAVIVYTWHLTQPYYVSGATHFA---WIFSEVLEPLAVVPQLLVSRGSTDAGQLGWTYVILMGIYPPLCVLSWVDTGRHYHFRAHYPFFYAAGIVQTGMYLMF 432
+ W G++ V+ W+L +V G + F W+FSE+LE ++V+PQLL+ R +T L Y++ +G Y L +L+W+ G A P + G +QT + + F
Sbjct: 97 KAWKFGMYCLLGSIVLAPIWYLIFKKWVIGTSTFLMVLWVFSEILESVSVIPQLLLLRQTTVPTVLDSFYLVALGTYRFLYILNWITRGAKEKDYAD-PTSWVWGTIQTALMIDF 210 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1522.3692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1522.3692.1 >prot_E-fasciculatus_F_contig1522.3692.1 ID=prot_E-fasciculatus_F_contig1522.3692.1|Name=mRNA_E-fasciculatus_F_contig1522.3692.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=196bp MLKYRPCLKASYDPSLDCFRVWMHGIFPSFVLAVIVYTWHLTQPYYVSGAback to top mRNA from alignment at E-fasciculatus_F_contig1522:1786..6327- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1522.3692.1 ID=mRNA_E-fasciculatus_F_contig1522.3692.1|Name=mRNA_E-fasciculatus_F_contig1522.3692.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4542bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1522:1786..6327- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1522:1786..6327- >mRNA_E-fasciculatus_F_contig1522.3692.1 ID=mRNA_E-fasciculatus_F_contig1522.3692.1|Name=mRNA_E-fasciculatus_F_contig1522.3692.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1176bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1522:1786..6327- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |