mRNA_E-fasciculatus_F_contig15179.3663.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
|
Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: A0A6H5JII8_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII8_9PHAE) HSP 1 Score: 405 bits (1042), Expect = 2.020e-137 Identity = 204/224 (91.07%), Postives = 214/224 (95.54%), Query Frame = 1
Query: 4 FSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWGYMGALWYVALWQMLSLLAGLVYVRLAASARNHVGMEETGVEAGTGPKDSRVRSHLVALKRSTLSFWLVAVLHTLLIIAYHLFANYSGHFLVE 675
F +DPKLHFNETKYG+VMSAISIPNLFMPFFGGLFLDSKGHKQGII+FLSLEL+GH+IFTLAMGCGNFWMAVFGEAV+GLGSGAVVVAMRAVVSKFFLA ELTF +GITIAMACVSKTLAKASVAPVAERWGYMGALWYVALWQ+LSLLAGLVYVRLA SA NHVGMEE G EAG GP+D RVRS LVALKRSTLSFWLVA+LHTLLIIAYHLFANYSGHFLVE
Sbjct: 157 FLEDPKLHFNETKYGTVMSAISIPNLFMPFFGGLFLDSKGHKQGIIIFLSLELIGHVIFTLAMGCGNFWMAVFGEAVYGLGSGAVVVAMRAVVSKFFLAKELTFGMGITIAMACVSKTLAKASVAPVAERWGYMGALWYVALWQVLSLLAGLVYVRLATSAGNHVGMEEAGAEAGPGPRDRRVRSRLVALKRSTLSFWLVAILHTLLIIAYHLFANYSGHFLVE 380
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: D7FMB1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMB1_ECTSI) HSP 1 Score: 392 bits (1006), Expect = 8.860e-134 Identity = 198/222 (89.19%), Postives = 209/222 (94.14%), Query Frame = 1
Query: 10 QDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWGYMGALWYVALWQMLSLLAGLVYVRLAASARNHVGMEETGVEAGTGPKDSRVRSHLVALKRSTLSFWLVAVLHTLLIIAYHLFANYSGHFLVE 675
QDPKLHFNETKYG+VMSAI IPNLFMPFFGGLFLDSKGHKQGII+FLS+EL+GH+IFTLAM CGNFWMAVFGEAV+GLGSG VVVAMRAVVSKFFLA EL+F +GITIAMA VSKTLAKASVAPVAERWGYMGALWYVALWQ+LSLLAGLVYVRLA SA NHVGMEE G EAG GPKD RVRSHLVAL+RSTLSFWLVA+LHTLL IAYHLFANYSGHFLVE
Sbjct: 29 QDPKLHFNETKYGTVMSAIWIPNLFMPFFGGLFLDSKGHKQGIIMFLSVELIGHVIFTLAMSCGNFWMAVFGEAVYGLGSGVVVVAMRAVVSKFFLAKELSFGMGITIAMAGVSKTLAKASVAPVAERWGYMGALWYVALWQVLSLLAGLVYVRLATSAGNHVGMEEAGAEAGPGPKDRRVRSHLVALRRSTLSFWLVAILHTLLNIAYHLFANYSGHFLVE 250
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: A0A836CI63_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI63_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.930e-63 Identity = 116/226 (51.33%), Postives = 158/226 (69.91%), Query Frame = 1
Query: 4 FSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVYVRLAASARNHVGMEETGVEAGTGPKDSRVRSHLVALKRSTLSFWLVAVLHTLLIIAYHLFANYSGHFLVEV 678
F +PKL+F KYGS+MSA S+PN+ MPF GG+ LDSKG + GI FL++ L GHI FTLAMG GNF +A+ G + GLG+G +VVA RAVVS++F ELTFALG+T+A+ACV+K+ AKA+ A +AE +G YM ALW L +S AG VY +++ A + G+EE GV G + + L+RSTL+F + +LHT+ I+ YHLFAN+SGH+LV++
Sbjct: 168 FMDNPKLNFTGVKYGSIMSAQSLPNIVMPFLGGVILDSKGPRVGIKTFLAIALAGHIAFTLAMGAGNFPLAMGGSVIFGLGTGTLVVAQRAVVSQYFYDKELTFALGVTVAVACVAKSSAKAAAAAIAEAFGGYMAALWCGGLLLGMSFAAGAVYAKVSERAASRAGVEEHGV----GHVALTPAAVGLTLRRSTLAFLCLVILHTVFIMVYHLFANFSGHYLVQM 389
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: A0A2D4BWF3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWF3_PYTIN) HSP 1 Score: 143 bits (361), Expect = 9.470e-38 Identity = 91/248 (36.69%), Postives = 134/248 (54.03%), Query Frame = 1
Query: 1 LFSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVY----VRLAASARNHVGMEET---GVEAGTGPKDSRVRSHLVALKRSTLS---------------FWLVAVLHTLLIIAYHLFANYSGHFLVE 675
L +DP T YG+++SA+S+PN+F+P FGG LD GH+ I FL +G IF + M FW+A+FG G+G G+VVV R +++ +F ELTFA+G+ +A+ +SK +AKA+VAPVA +G Y+ ALWY L +S++ G++ RL V +E G+ DS+ R + L++ L+ FW +AVLH + I +HLF N S FL E
Sbjct: 84 LMLEDPDFPLTNTMYGALVSAVSVPNMFIPLFGGRLLDKSGHRS-IRFFLIWICIGQAIFAIGMELRQFWLALFGRVFFGVGEGSVVVGARVLIAYWFRNKELTFAMGVGVAITNISKMMAKATVAPVAIYFGGYVQALWYGVLICAISVVIGIIVCRFTTRLQQLVEERVNNDEPLDQGLHWLNDYADSKRRHRQLLLRQPHLANEQITCESVQDFSSMFWTLAVLHVVFITVFHLFQNVSSSFLKE 330
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: K8YXS2_NANGC (Major facilitator superfamily n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YXS2_NANGC) HSP 1 Score: 146 bits (369), Expect = 6.740e-37 Identity = 75/161 (46.58%), Postives = 116/161 (72.05%), Query Frame = 1
Query: 13 DPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLAN-ELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVYVRLAASAR 489
D +LH +ET+YG ++S S+PN F+PF GG+FLD +GH+ +LFL L LLG +FT+A+ G++ A+ G V GLG G+VVVA RAV+ F A ++TFA+G+++AMAC+SKTL++A+V P A+ G Y+G LWY + +LS LAG++++ ++ ++
Sbjct: 199 DARLHLSETRYGLLLSMSSLPNFFIPFLGGVFLDKRGHRFATLLFLFLVLLGQCLFTVAIQLGSYPWALVGRVVMGLGEGSVVVAQRAVICHVFKAQAQVTFAVGVSVAMACLSKTLSRATVVPAADLLGGYVGGLWYTVVVCLLSTLAGVLFLVISDESK 359
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: W7TQA4_9STRA (Major facilitator superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQA4_9STRA) HSP 1 Score: 146 bits (369), Expect = 1.110e-36 Identity = 75/161 (46.58%), Postives = 116/161 (72.05%), Query Frame = 1
Query: 13 DPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLAN-ELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVYVRLAASAR 489
D +LH +ET+YG ++S S+PN F+PF GG+FLD +GH+ +LFL L LLG +FT+A+ G++ A+ G V GLG G+VVVA RAV+ F A ++TFA+G+++AMAC+SKTL++A+V P A+ G Y+G LWY + +LS LAG++++ ++ ++
Sbjct: 347 DARLHLSETRYGLLLSMSSLPNFFIPFLGGVFLDKRGHRFATLLFLFLVLLGQCLFTVAIQLGSYPWALVGRVVMGLGEGSVVVAQRAVICHVFKAQAQVTFAVGVSVAMACLSKTLSRATVVPAADLLGGYVGGLWYTVVVCLLSTLAGVLFLVISDESK 507
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: A0A6G0WCM1_9STRA (MFS domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCM1_9STRA) HSP 1 Score: 140 bits (354), Expect = 2.190e-35 Identity = 88/243 (36.21%), Postives = 133/243 (54.73%), Query Frame = 1
Query: 13 DPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWGYMGALWYVALWQMLSLLAGLVYVRLAASARNHVGMEETGVEAGTGPKD--------------SRVRSH-------LVALKRSTLSFWLVAVLHTLLIIAYHLFANYSGHFLVEV 678
D T YG++ SA+SIPN+ +PFFGG +DS+GH I+ FL L LGH + T A+ FW+A G ++GLG G+V+V RA+VS +F ++E+TFA+G+ +A VSK LAKA+VAPV+ Y G+ Y L+ ++ L + +A H+ +T + GP D R+R+ L +LK + FW++ VLH + + +HLF N S +L +V
Sbjct: 81 DKSFPLTNTMYGALNSAVSIPNMIIPFFGGHIIDSRGHST-ILWFLLLMCLGHALVTFAISQEMFWLAFAGRILYGLGGGSVIVGGRAIVSYWFDSSEITFAVGVMVAFTSVSKMLAKATVAPVSL---YFGSYTYGLLYGLVVCLFSCIVALIAVQYIAHLNQLKTSYQDQRGPLDPQLPWLNKFISTQGKRLRTAAAHSVPTLSSLKDFSAMFWILVVLHVVYVNVFHLFLNISSSYLYQV 319
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: A0A8K1CGU8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGU8_PYTOL) HSP 1 Score: 139 bits (351), Expect = 6.120e-35 Identity = 88/246 (35.77%), Postives = 134/246 (54.47%), Query Frame = 1
Query: 1 LFSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVYVRLAASARNHVGMEETGVEAGTGPK----------DSRVRSHLVALKRSTLS----------FWLVAVLHTLLIIAYHLFANYSGHFLVE 675
L +DP T YG+++SA+S+PN+F+P +GG FLD GH+ I FL +G IF + M FW+A+FG G+G G+VVV R ++ +F ELTFA+G+ +A+ VSK LAK++VAPVA +G Y+ ALWY + ++S L G++ R + V E +A P+ + R R ++ + + +S FW +A+LH + + +HLF N S FL E
Sbjct: 74 LMLEDPDFPMTNTMYGALVSAVSVPNMFIPLYGGRFLDKSGHRS-IQFFLIWICIGQAIFAIGMELKLFWLALFGRVFFGVGEGSVVVGARVFIAYWFRNKELTFAMGVGVAITNVSKMLAKSTVAPVALYFGGYVQALWYGVVICVVSFLVGVLCCRYTNRLKKLV-TERVQQDAPLDPELHWLKDYADNERRQRQIVMNVNQEQVSCDSVEGFSQLFWTLAILHVIFVTLFHLFQNVSSSFLKE 317
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: K3WKH2_GLOUD (MFS domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKH2_GLOUD) HSP 1 Score: 140 bits (352), Expect = 6.970e-35 Identity = 91/254 (35.83%), Postives = 135/254 (53.15%), Query Frame = 1
Query: 1 LFSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVYVRLAASARNHVGMEETGVEAGTGPKDSRV-----------RSHLVALKRSTLS-----------------FWLVAVLHTLLIIAYHLFANYSGHFLVE 675
L DP + T YG+++SA+S+PN+F+P FGG LD GH+ II FL +G IF + M FW+A+FG G+G G+VVV R ++ +F ELTFA+G+ +A+ +SK LAKA+VAPVA +G Y+ ALWY +S++ G++ VR + V + VE+ P DS + R ++ + + LS FW +AVLH + I +HLF N S +L +
Sbjct: 86 LMLDDPTFPISNTMYGALISAVSVPNMFIPLFGGRLLDKSGHRS-IIFFLIWICVGQAIFAIGMELKLFWLALFGRVFFGVGEGSVVVGARVFIAYWFRNRELTFAMGVGVAVTNISKMLAKATVAPVAIHFGGYVQALWYGVFICSVSVVIGIIVVRYTTLLKRIV---KERVESDE-PLDSELYWLKDYAEQKRRKKIIKARMAHLSNNPHEVSCESVQQFSRMFWTIAVLHVMFINVFHLFQNVSSSYLYQ 334
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: A0A6G0WCA3_9STRA (MFS domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCA3_9STRA) HSP 1 Score: 138 bits (347), Expect = 1.350e-34 Identity = 93/253 (36.76%), Postives = 133/253 (52.57%), Query Frame = 1
Query: 1 LFSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVYVRLAASAR--------------------------NHVGMEETGVEAGTGPKDSRVRSHLVALKRSTLSFWLVAVLHTLLIIAYHLFANYSGHFLVEV 678
L DP + + T YG++ SA+SIPN+ +PFFGG LDSKGH I++FL + +G IFT AM FW+A+ G + GLG G+VV RA++S +F +ELT A+G+ IA +SK LAKA+VAP++ +G Y+ SL+ G+V V+ A N++ T +EA +D R L + +L FWLV LH + I A+HLF N S +L +V
Sbjct: 57 LLLDDPVVPVSNTMYGALNSAVSIPNMIVPFFGGHVLDSKGHDS-ILIFLVVMCIGQAIFTYAMDAHIFWLALVGRTIFGLGEGSVVAGARAIMSFWFDRSELTCAMGVMIATTNMSKMLAKATVAPLSLYFGGYIYXXXXXXXXXXXSLVFGIVVVKATARLNQLKQIVHAQQQQGKPLEMDSKLGWLANYLNQNSTDLEA---QQDVREHGMLRSFGEFSLVFWLVVALHVVFINAFHLFQNISSSYLYQV 305 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15179.3663.1 >prot_E-fasciculatus_F_contig15179.3663.1 ID=prot_E-fasciculatus_F_contig15179.3663.1|Name=mRNA_E-fasciculatus_F_contig15179.3663.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=234bp LFSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLback to top mRNA from alignment at E-fasciculatus_F_contig15179:7..2503+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15179.3663.1 ID=mRNA_E-fasciculatus_F_contig15179.3663.1|Name=mRNA_E-fasciculatus_F_contig15179.3663.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2497bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15179:7..2503+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15179:7..2503+ >mRNA_E-fasciculatus_F_contig15179.3663.1 ID=mRNA_E-fasciculatus_F_contig15179.3663.1|Name=mRNA_E-fasciculatus_F_contig15179.3663.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1404bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15179:7..2503+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |