mRNA_E-fasciculatus_F_contig15179.3663.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig15179.3663.1
Unique NamemRNA_E-fasciculatus_F_contig15179.3663.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: A0A6H5JII8_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII8_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 2.020e-137
Identity = 204/224 (91.07%), Postives = 214/224 (95.54%), Query Frame = 1
Query:    4 FSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWGYMGALWYVALWQMLSLLAGLVYVRLAASARNHVGMEETGVEAGTGPKDSRVRSHLVALKRSTLSFWLVAVLHTLLIIAYHLFANYSGHFLVE 675
            F +DPKLHFNETKYG+VMSAISIPNLFMPFFGGLFLDSKGHKQGII+FLSLEL+GH+IFTLAMGCGNFWMAVFGEAV+GLGSGAVVVAMRAVVSKFFLA ELTF +GITIAMACVSKTLAKASVAPVAERWGYMGALWYVALWQ+LSLLAGLVYVRLA SA NHVGMEE G EAG GP+D RVRS LVALKRSTLSFWLVA+LHTLLIIAYHLFANYSGHFLVE
Sbjct:  157 FLEDPKLHFNETKYGTVMSAISIPNLFMPFFGGLFLDSKGHKQGIIIFLSLELIGHVIFTLAMGCGNFWMAVFGEAVYGLGSGAVVVAMRAVVSKFFLAKELTFGMGITIAMACVSKTLAKASVAPVAERWGYMGALWYVALWQVLSLLAGLVYVRLATSAGNHVGMEEAGAEAGPGPRDRRVRSRLVALKRSTLSFWLVAILHTLLIIAYHLFANYSGHFLVE 380          
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: D7FMB1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMB1_ECTSI)

HSP 1 Score: 392 bits (1006), Expect = 8.860e-134
Identity = 198/222 (89.19%), Postives = 209/222 (94.14%), Query Frame = 1
Query:   10 QDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWGYMGALWYVALWQMLSLLAGLVYVRLAASARNHVGMEETGVEAGTGPKDSRVRSHLVALKRSTLSFWLVAVLHTLLIIAYHLFANYSGHFLVE 675
            QDPKLHFNETKYG+VMSAI IPNLFMPFFGGLFLDSKGHKQGII+FLS+EL+GH+IFTLAM CGNFWMAVFGEAV+GLGSG VVVAMRAVVSKFFLA EL+F +GITIAMA VSKTLAKASVAPVAERWGYMGALWYVALWQ+LSLLAGLVYVRLA SA NHVGMEE G EAG GPKD RVRSHLVAL+RSTLSFWLVA+LHTLL IAYHLFANYSGHFLVE
Sbjct:   29 QDPKLHFNETKYGTVMSAIWIPNLFMPFFGGLFLDSKGHKQGIIMFLSVELIGHVIFTLAMSCGNFWMAVFGEAVYGLGSGVVVVAMRAVVSKFFLAKELSFGMGITIAMAGVSKTLAKASVAPVAERWGYMGALWYVALWQVLSLLAGLVYVRLATSAGNHVGMEEAGAEAGPGPKDRRVRSHLVALRRSTLSFWLVAILHTLLNIAYHLFANYSGHFLVE 250          
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: A0A836CI63_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI63_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.930e-63
Identity = 116/226 (51.33%), Postives = 158/226 (69.91%), Query Frame = 1
Query:    4 FSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVYVRLAASARNHVGMEETGVEAGTGPKDSRVRSHLVALKRSTLSFWLVAVLHTLLIIAYHLFANYSGHFLVEV 678
            F  +PKL+F   KYGS+MSA S+PN+ MPF GG+ LDSKG + GI  FL++ L GHI FTLAMG GNF +A+ G  + GLG+G +VVA RAVVS++F   ELTFALG+T+A+ACV+K+ AKA+ A +AE +G YM ALW   L   +S  AG VY +++  A +  G+EE GV    G       +  + L+RSTL+F  + +LHT+ I+ YHLFAN+SGH+LV++
Sbjct:  168 FMDNPKLNFTGVKYGSIMSAQSLPNIVMPFLGGVILDSKGPRVGIKTFLAIALAGHIAFTLAMGAGNFPLAMGGSVIFGLGTGTLVVAQRAVVSQYFYDKELTFALGVTVAVACVAKSSAKAAAAAIAEAFGGYMAALWCGGLLLGMSFAAGAVYAKVSERAASRAGVEEHGV----GHVALTPAAVGLTLRRSTLAFLCLVILHTVFIMVYHLFANFSGHYLVQM 389          
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: A0A2D4BWF3_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWF3_PYTIN)

HSP 1 Score: 143 bits (361), Expect = 9.470e-38
Identity = 91/248 (36.69%), Postives = 134/248 (54.03%), Query Frame = 1
Query:    1 LFSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVY----VRLAASARNHVGMEET---GVEAGTGPKDSRVRSHLVALKRSTLS---------------FWLVAVLHTLLIIAYHLFANYSGHFLVE 675
            L  +DP      T YG+++SA+S+PN+F+P FGG  LD  GH+  I  FL    +G  IF + M    FW+A+FG    G+G G+VVV  R +++ +F   ELTFA+G+ +A+  +SK +AKA+VAPVA  +G Y+ ALWY  L   +S++ G++      RL       V  +E    G+       DS+ R   + L++  L+               FW +AVLH + I  +HLF N S  FL E
Sbjct:   84 LMLEDPDFPLTNTMYGALVSAVSVPNMFIPLFGGRLLDKSGHRS-IRFFLIWICIGQAIFAIGMELRQFWLALFGRVFFGVGEGSVVVGARVLIAYWFRNKELTFAMGVGVAITNISKMMAKATVAPVAIYFGGYVQALWYGVLICAISVVIGIIVCRFTTRLQQLVEERVNNDEPLDQGLHWLNDYADSKRRHRQLLLRQPHLANEQITCESVQDFSSMFWTLAVLHVVFITVFHLFQNVSSSFLKE 330          
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: K8YXS2_NANGC (Major facilitator superfamily n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YXS2_NANGC)

HSP 1 Score: 146 bits (369), Expect = 6.740e-37
Identity = 75/161 (46.58%), Postives = 116/161 (72.05%), Query Frame = 1
Query:   13 DPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLAN-ELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVYVRLAASAR 489
            D +LH +ET+YG ++S  S+PN F+PF GG+FLD +GH+   +LFL L LLG  +FT+A+  G++  A+ G  V GLG G+VVVA RAV+   F A  ++TFA+G+++AMAC+SKTL++A+V P A+  G Y+G LWY  +  +LS LAG++++ ++  ++
Sbjct:  199 DARLHLSETRYGLLLSMSSLPNFFIPFLGGVFLDKRGHRFATLLFLFLVLLGQCLFTVAIQLGSYPWALVGRVVMGLGEGSVVVAQRAVICHVFKAQAQVTFAVGVSVAMACLSKTLSRATVVPAADLLGGYVGGLWYTVVVCLLSTLAGVLFLVISDESK 359          
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: W7TQA4_9STRA (Major facilitator superfamily n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQA4_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.110e-36
Identity = 75/161 (46.58%), Postives = 116/161 (72.05%), Query Frame = 1
Query:   13 DPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLAN-ELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVYVRLAASAR 489
            D +LH +ET+YG ++S  S+PN F+PF GG+FLD +GH+   +LFL L LLG  +FT+A+  G++  A+ G  V GLG G+VVVA RAV+   F A  ++TFA+G+++AMAC+SKTL++A+V P A+  G Y+G LWY  +  +LS LAG++++ ++  ++
Sbjct:  347 DARLHLSETRYGLLLSMSSLPNFFIPFLGGVFLDKRGHRFATLLFLFLVLLGQCLFTVAIQLGSYPWALVGRVVMGLGEGSVVVAQRAVICHVFKAQAQVTFAVGVSVAMACLSKTLSRATVVPAADLLGGYVGGLWYTVVVCLLSTLAGVLFLVISDESK 507          
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: A0A6G0WCM1_9STRA (MFS domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCM1_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.190e-35
Identity = 88/243 (36.21%), Postives = 133/243 (54.73%), Query Frame = 1
Query:   13 DPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWGYMGALWYVALWQMLSLLAGLVYVRLAASARNHVGMEETGVEAGTGPKD--------------SRVRSH-------LVALKRSTLSFWLVAVLHTLLIIAYHLFANYSGHFLVEV 678
            D       T YG++ SA+SIPN+ +PFFGG  +DS+GH   I+ FL L  LGH + T A+    FW+A  G  ++GLG G+V+V  RA+VS +F ++E+TFA+G+ +A   VSK LAKA+VAPV+    Y G+  Y  L+ ++  L   +   +A     H+   +T  +   GP D               R+R+        L +LK  +  FW++ VLH + +  +HLF N S  +L +V
Sbjct:   81 DKSFPLTNTMYGALNSAVSIPNMIIPFFGGHIIDSRGHST-ILWFLLLMCLGHALVTFAISQEMFWLAFAGRILYGLGGGSVIVGGRAIVSYWFDSSEITFAVGVMVAFTSVSKMLAKATVAPVSL---YFGSYTYGLLYGLVVCLFSCIVALIAVQYIAHLNQLKTSYQDQRGPLDPQLPWLNKFISTQGKRLRTAAAHSVPTLSSLKDFSAMFWILVVLHVVYVNVFHLFLNISSSYLYQV 319          
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: A0A8K1CGU8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGU8_PYTOL)

HSP 1 Score: 139 bits (351), Expect = 6.120e-35
Identity = 88/246 (35.77%), Postives = 134/246 (54.47%), Query Frame = 1
Query:    1 LFSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVYVRLAASARNHVGMEETGVEAGTGPK----------DSRVRSHLVALKRSTLS----------FWLVAVLHTLLIIAYHLFANYSGHFLVE 675
            L  +DP      T YG+++SA+S+PN+F+P +GG FLD  GH+  I  FL    +G  IF + M    FW+A+FG    G+G G+VVV  R  ++ +F   ELTFA+G+ +A+  VSK LAK++VAPVA  +G Y+ ALWY  +  ++S L G++  R     +  V  E    +A   P+          + R R  ++ + +  +S          FW +A+LH + +  +HLF N S  FL E
Sbjct:   74 LMLEDPDFPMTNTMYGALVSAVSVPNMFIPLYGGRFLDKSGHRS-IQFFLIWICIGQAIFAIGMELKLFWLALFGRVFFGVGEGSVVVGARVFIAYWFRNKELTFAMGVGVAITNVSKMLAKSTVAPVALYFGGYVQALWYGVVICVVSFLVGVLCCRYTNRLKKLV-TERVQQDAPLDPELHWLKDYADNERRQRQIVMNVNQEQVSCDSVEGFSQLFWTLAILHVIFVTLFHLFQNVSSSFLKE 317          
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: K3WKH2_GLOUD (MFS domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKH2_GLOUD)

HSP 1 Score: 140 bits (352), Expect = 6.970e-35
Identity = 91/254 (35.83%), Postives = 135/254 (53.15%), Query Frame = 1
Query:    1 LFSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVYVRLAASARNHVGMEETGVEAGTGPKDSRV-----------RSHLVALKRSTLS-----------------FWLVAVLHTLLIIAYHLFANYSGHFLVE 675
            L   DP    + T YG+++SA+S+PN+F+P FGG  LD  GH+  II FL    +G  IF + M    FW+A+FG    G+G G+VVV  R  ++ +F   ELTFA+G+ +A+  +SK LAKA+VAPVA  +G Y+ ALWY      +S++ G++ VR     +  V   +  VE+   P DS +           R  ++  + + LS                 FW +AVLH + I  +HLF N S  +L +
Sbjct:   86 LMLDDPTFPISNTMYGALISAVSVPNMFIPLFGGRLLDKSGHRS-IIFFLIWICVGQAIFAIGMELKLFWLALFGRVFFGVGEGSVVVGARVFIAYWFRNRELTFAMGVGVAVTNISKMLAKATVAPVAIHFGGYVQALWYGVFICSVSVVIGIIVVRYTTLLKRIV---KERVESDE-PLDSELYWLKDYAEQKRRKKIIKARMAHLSNNPHEVSCESVQQFSRMFWTIAVLHVMFINVFHLFQNVSSSYLYQ 334          
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Match: A0A6G0WCA3_9STRA (MFS domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCA3_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.350e-34
Identity = 93/253 (36.76%), Postives = 133/253 (52.57%), Query Frame = 1
Query:    1 LFSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFLSLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLANELTFALGITIAMACVSKTLAKASVAPVAERWG-YMGALWYVALWQMLSLLAGLVYVRLAASAR--------------------------NHVGMEETGVEAGTGPKDSRVRSHLVALKRSTLSFWLVAVLHTLLIIAYHLFANYSGHFLVEV 678
            L   DP +  + T YG++ SA+SIPN+ +PFFGG  LDSKGH   I++FL +  +G  IFT AM    FW+A+ G  + GLG G+VV   RA++S +F  +ELT A+G+ IA   +SK LAKA+VAP++  +G Y+            SL+ G+V V+  A                             N++    T +EA    +D R    L +    +L FWLV  LH + I A+HLF N S  +L +V
Sbjct:   57 LLLDDPVVPVSNTMYGALNSAVSIPNMIVPFFGGHVLDSKGHDS-ILIFLVVMCIGQAIFTYAMDAHIFWLALVGRTIFGLGEGSVVAGARAIMSFWFDRSELTCAMGVMIATTNMSKMLAKATVAPLSLYFGGYIYXXXXXXXXXXXSLVFGIVVVKATARLNQLKQIVHAQQQQGKPLEMDSKLGWLANYLNQNSTDLEA---QQDVREHGMLRSFGEFSLVFWLVVALHVVFINAFHLFQNISSSYLYQV 305          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15179.3663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JII8_9PHAE2.020e-13791.07MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FMB1_ECTSI8.860e-13489.19MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CI63_9STRA1.930e-6351.33Major facilitator superfamily domain-containing pr... [more]
A0A2D4BWF3_PYTIN9.470e-3836.69Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
K8YXS2_NANGC6.740e-3746.58Major facilitator superfamily n=1 Tax=Nannochlorop... [more]
W7TQA4_9STRA1.110e-3646.58Major facilitator superfamily n=2 Tax=Monodopsidac... [more]
A0A6G0WCM1_9STRA2.190e-3536.21MFS domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A8K1CGU8_PYTOL6.120e-3535.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WKH2_GLOUD6.970e-3535.83MFS domain-containing protein n=1 Tax=Globisporang... [more]
A0A6G0WCA3_9STRA1.350e-3436.76MFS domain-containing protein n=1 Tax=Aphanomyces ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15179contigE-fasciculatus_F_contig15179:7..2503 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score389.0
Seed ortholog evalue1.5e-105
Seed eggNOG ortholog2880.D7FMB1
Preferred nameim:7160594
EggNOG free text desc.transmembrane transport
EggNOG OGsCOG0477@1,KOG4686@2759
Ec32 ortholog descriptionMajor facilitator superfamily
Ec32 orthologEc-17_003610.1
COG Functional cat.EGP
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons4
Model size702
Cds size702
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15179.3663.1prot_E-fasciculatus_F_contig15179.3663.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig15179 7..2503 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927997.207822-CDS-E-fasciculatus_F_contig15179:6..1721622927997.207822-CDS-E-fasciculatus_F_contig15179:6..172Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15179 7..172 +
1695995782.8099384-CDS-E-fasciculatus_F_contig15179:6..1721695995782.8099384-CDS-E-fasciculatus_F_contig15179:6..172Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15179 7..172 +
1622927997.2221293-CDS-E-fasciculatus_F_contig15179:731..8861622927997.2221293-CDS-E-fasciculatus_F_contig15179:731..886Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15179 732..886 +
1695995782.8248885-CDS-E-fasciculatus_F_contig15179:731..8861695995782.8248885-CDS-E-fasciculatus_F_contig15179:731..886Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15179 732..886 +
1622927997.232678-CDS-E-fasciculatus_F_contig15179:1432..15811622927997.232678-CDS-E-fasciculatus_F_contig15179:1432..1581Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15179 1433..1581 +
1695995782.83433-CDS-E-fasciculatus_F_contig15179:1432..15811695995782.83433-CDS-E-fasciculatus_F_contig15179:1432..1581Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15179 1433..1581 +
1622927997.245992-CDS-E-fasciculatus_F_contig15179:2271..25031622927997.245992-CDS-E-fasciculatus_F_contig15179:2271..2503Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15179 2272..2503 +
1695995782.8426738-CDS-E-fasciculatus_F_contig15179:2271..25031695995782.8426738-CDS-E-fasciculatus_F_contig15179:2271..2503Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig15179 2272..2503 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig15179.3663.1

>prot_E-fasciculatus_F_contig15179.3663.1 ID=prot_E-fasciculatus_F_contig15179.3663.1|Name=mRNA_E-fasciculatus_F_contig15179.3663.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=234bp
LFSQDPKLHFNETKYGSVMSAISIPNLFMPFFGGLFLDSKGHKQGIILFL
SLELLGHIIFTLAMGCGNFWMAVFGEAVHGLGSGAVVVAMRAVVSKFFLA
NELTFALGITIAMACVSKTLAKASVAPVAERWGYMGALWYVALWQMLSLL
AGLVYVRLAASARNHVGMEETGVEAGTGPKDSRVRSHLVALKRSTLSFWL
VAVLHTLLIIAYHLFANYSGHFLVEVREGQQQQ*
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mRNA from alignment at E-fasciculatus_F_contig15179:7..2503+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig15179.3663.1 ID=mRNA_E-fasciculatus_F_contig15179.3663.1|Name=mRNA_E-fasciculatus_F_contig15179.3663.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2497bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15179:7..2503+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTTTTCTCGCAGGATCCTAAGCTACACTTCAACGAGACCAAGTACGGGTC GGTGATGTCCGCGATTTCTATACCTAACCTCTTCATGCCCTTCTTCGGAG GGCTGTTTCTCGACTCCAAGGGCCACAAGCAGGGCATCATCCTCTTCCTC AGCCTCGAGCTCCTAGGTGCGTCTTTCTACACAATGCACGGCCCGAGCTG GTGGTGTAGTATACGCTGACGATGCCTGCATGCCTTACCGTTACAGCTCT CTCTTTGAAGGCACCGCCGCCGCCGCTGCTATTGCTGCCGCTGCTGCCAC TGCTGCCACGTTTGTTCAACCTTGGATGTTGTGATTCCTGCAAGCCTTTC CGCGTTCTCTTTTATGCCAGCTCAGTTGCAGCTGCTGCTACTGCTGCCGC TTTTGTTCAACCGTTGCTGGTGCTTATGTTGACGTTGTTGCTGCCTTTGT TACTGCTGCCGCCTCCGTACAATCGTGGCTGGTGCTTGTTCACCTTGTTG CTGCTTCTGTTACTGCTGCCGCTTCCGTGCAATCGTAGCTGGTGCTCATG TTCACCTTGTTGCCGCTGCTGCTGCTGCCGCCGCTTTCGTGCAACCGTTG CTGCTGGTGCTCATATTCACCTTGTTGCCGCTGCTGTTCCTGCTGCCCCT TTCGTGCAACCGTGACTGCTGGTGCTCATGTTCACCTCGCTTGTTGCTAC TTGTTTCTCCTTCGACCAAGCACAGGCCACATCATCTTCACGCTGGCGAT GGGCTGCGGCAACTTCTGGATGGCCGTTTTCGGGGAGGCGGTGCACGGGC TAGGTTCTGGCGCCGTTGTGGTGGCGATGCGGGCCGTCGTCTCCAAGTTT TTCCTCGCGAACGAGCTAACCTTCGCCTTGGTGAGAAGAGAAAACGAACG CCCCGTGGTGTGTAAGACTGCTGTGTGTGCAGGTTGGTGAACTTTTTCTT TGTGGTGCGGTGAGGTTCGCTGGGCTCTTCGAGTCAAAAACAAGCCAGCT GTGTGAGCTGTTCGAGCTTGGGAAGCGTCGCTGATGGCAGCTGGCAGCTG ATTCACACCAACACATGCCTTGTTTTCATCTTGCATCACCCCTTGATGAC ACGACTGCATACTATGCTCTGATTTAGCCCACTCAGGAGGCGCATCTTGT GTGTCCTTGTCATTTGGTGCCATCATTCAAAGAACATGTTTTGTTCCAAC GAGTCGTTGCACATGAAGAGGTCGTCGTACACACCGGAGTGATGTCAACG CAAGGGGTGTGATAAAAGTTCGACGCCGATTTTGATGCAGAATCAATCAC ACACGGGTGCGGCGGCTTTGGAACGTCTCGCTGTTGTACGTATATCATCT CTCCCTCTAACCGCCCCCCTCTCTCTCTCCACCACCCCCCCCCCTCCTCC TCTCTCTCTTGTGAACAATTAACCAGGGCATCACGATCGCCATGGCATGC GTGTCTAAGACTCTGGCAAAGGCGTCGGTGGCTCCGGTCGCTGAGAGGTG GGGGTACATGGGGGCGCTCTGGTACGTGGCACTGTGGCAGATGCTTTCCC TTTTGGCGGGGCTTGTCTACGTCAGGTGAGAGACCCTTAAGCTTCATTTT GGTTCGTTCGGTGCAAGCTCCTGTAGTAGCTTTTCACGCATACTGTTGTC GTTGCTGTTGTTGTTGTTGTTGACGTTGATGTCTTCATAGTATAAACTTC CGGTCTCTCATCACTGGCCCAAATGACGGACGCGAAGCAATAAAGTGAAA ATTCTAATTCTTCGTGTGTGGCCTTCCTCTTGAGTAACCTCGGCTGGTGC GTTCAAAACACATTCCGAAAGATGTCCTCGTTGACGTTTCAGCATAAATG GGACGAAAAGCACACAAACAAGTTACGTTCAGGTCATGAGCGTCCGGACG GTCTTTCGATATTTCGTTTCGTGCGTTTTTTTTTTTTGTCGAGATATGTT GTTCGTTGGTGGCTTCTTGAGGTTCTCTGTACACAGCCGCTCCTTCCTGT TGCTAGTAGTTTTAAGAGAACATACGAACGTTTACAGACAAGCTTGTACC TGTTTGAGACTTTGCCTCCTCATCGAAGACATGTGTTGAAAGTCTACACC TTTTTGATTGATTTGGGAGAAATCTGCGAGATACTTGTGGGGTAATTTTG AAGAAACAGACATCCTTCGCCTGGATATTGTACTTGGTTTTTCTACACAC TCCCCCCTCCTCCCCCCTCCTGGTATTTAGCTTCACATTTTCCCCCCGTG CTGGATGCTGGATAGATTGGCGGCCTCCGCGCGCAACCATGTCGGCATGG AGGAGACGGGAGTGGAAGCGGGCACGGGGCCAAAGGACAGCCGTGTTCGG TCGCACCTGGTGGCGTTGAAGCGGTCGACGCTGTCCTTCTGGCTGGTGGC GGTCTTGCACACCCTGCTCATCATAGCCTACCACCTCTTCGCGAACTACT CGGGCCACTTCTTGGTGGAGGTAAGAGAGGGGCAGCAACAGCAGTAG
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Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15179:7..2503+

>mRNA_E-fasciculatus_F_contig15179.3663.1 ID=mRNA_E-fasciculatus_F_contig15179.3663.1|Name=mRNA_E-fasciculatus_F_contig15179.3663.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1404bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15179:7..2503+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
CTTTTCTCGCAGGATCCTAAGCTACACTTCAACGAGACCAAGTACGGGTC
GGTGATGTCCGCGATTTCTATACCTAACCTCTTCATGCCCTTCTTCGGAG
GGCTGTTTCTCGACTCCAAGGGCCACAAGCAGGGCATCATCCTCTTCCTC
AGCCTCGAGCTCCTAGCTTTTCTCGCAGGATCCTAAGCTACACTTCAACG
AGACCAAGTACGGGTCGGTGATGTCCGCGATTTCTATACCTAACCTCTTC
ATGCCCTTCTTCGGAGGGCTGTTTCTCGACTCCAAGGGCCACAAGCAGGG
CATCATCCTCTTCCTCAGCCTCGAGCTCCTAGGCCACATCATCTTCACGC
TGGCGATGGGCTGCGGCAACTTCTGGATGGCCGTTTTCGGGGAGGCGGTG
CACGGGCTAGGTTCTGGCGCCGTTGTGGTGGCGATGCGGGCCGTCGTCTC
CAAGTTTTTCCTCGCGAACGAGCTAACCTTCGCCTTGGCCACATCATCTT
CACGCTGGCGATGGGCTGCGGCAACTTCTGGATGGCCGTTTTCGGGGAGG
CGGTGCACGGGCTAGGTTCTGGCGCCGTTGTGGTGGCGATGCGGGCCGTC
GTCTCCAAGTTTTTCCTCGCGAACGAGCTAACCTTCGCCTTGGGCATCAC
GATCGCCATGGCATGCGTGTCTAAGACTCTGGCAAAGGCGTCGGTGGCTC
CGGTCGCTGAGAGGTGGGGGTACATGGGGGCGCTCTGGTACGTGGCACTG
TGGCAGATGCTTTCCCTTTTGGCGGGGCTTGTCTACGTCAGGGCATCACG
ATCGCCATGGCATGCGTGTCTAAGACTCTGGCAAAGGCGTCGGTGGCTCC
GGTCGCTGAGAGGTGGGGGTACATGGGGGCGCTCTGGTACGTGGCACTGT
GGCAGATGCTTTCCCTTTTGGCGGGGCTTGTCTACGTCAGATTGGCGGCC
TCCGCGCGCAACCATGTCGGCATGGAGGAGACGGGAGTGGAAGCGGGCAC
GGGGCCAAAGGACAGCCGTGTTCGGTCGCACCTGGTGGCGTTGAAGCGGT
CGACGCTGTCCTTCTGGCTGGTGGCGGTCTTGCACACCCTGCTCATCATA
GCCTACCACCTCTTCGCGAACTACTCGGGCCACTTCTTGGTGGAGGTAAG
AGAGGGGCAGCAACAGCAGTAGATTGGCGGCCTCCGCGCGCAACCATGTC
GGCATGGAGGAGACGGGAGTGGAAGCGGGCACGGGGCCAAAGGACAGCCG
TGTTCGGTCGCACCTGGTGGCGTTGAAGCGGTCGACGCTGTCCTTCTGGC
TGGTGGCGGTCTTGCACACCCTGCTCATCATAGCCTACCACCTCTTCGCG
AACTACTCGGGCCACTTCTTGGTGGAGGTAAGAGAGGGGCAGCAACAGCA
GTAG
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