mRNA_E-fasciculatus_F_contig15129.3637.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15129.3637.1 vs. uniprot
Match: A0A6H5KV36_9PHAE (Aminotran_1_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV36_9PHAE) HSP 1 Score: 188 bits (477), Expect = 8.290e-55 Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 1
Query: 22 AQSQYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDMDDLERVLK 318
A +YGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDM DLERVLK
Sbjct: 228 ALDKYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDMADLERVLK 326
BLAST of mRNA_E-fasciculatus_F_contig15129.3637.1 vs. uniprot
Match: A0A835Z5A0_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5A0_9STRA) HSP 1 Score: 150 bits (378), Expect = 8.880e-41 Identity = 74/99 (74.75%), Postives = 82/99 (82.83%), Query Frame = 1
Query: 19 AAQSQYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDMDDLERVL 315
AA +YGCGSCGPRGFYGTID H K+ED+ AAFM TE AISYSDSA T+SS I AFAK+GDL + D GV E VQTG++LSRSTVR FKHNDMDDL RVL
Sbjct: 152 AAMEKYGCGSCGPRGFYGTIDAHLKLEDQAAAFMRTEAAISYSDSAATVSSCIAAFAKRGDLILADMGVHEAVQTGLDLSRSTVRFFKHNDMDDLLRVL 250
BLAST of mRNA_E-fasciculatus_F_contig15129.3637.1 vs. uniprot
Match: A0A4D9CT10_9STRA (Aminotran_1_2 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT10_9STRA) HSP 1 Score: 147 bits (371), Expect = 9.790e-40 Identity = 69/100 (69.00%), Postives = 86/100 (86.00%), Query Frame = 1
Query: 19 AAQSQYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDMDDLERVLK 318
AA ++YGCGSCGPRGFYG+IDVH E +AAF+G EEAISYSD+A+++SST+PAFAKKGDL + D+GV E +QT INLSR+ VR F+HNDM+DLERVL+
Sbjct: 162 AALNKYGCGSCGPRGFYGSIDVHVMAEQAMAAFLGAEEAISYSDAASSVSSTLPAFAKKGDLLIADEGVYEPIQTAINLSRAQVRYFRHNDMEDLERVLR 261
BLAST of mRNA_E-fasciculatus_F_contig15129.3637.1 vs. uniprot
Match: A0A7S0PWX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PWX5_9STRA) HSP 1 Score: 137 bits (346), Expect = 5.530e-39 Identity = 64/99 (64.65%), Postives = 82/99 (82.83%), Query Frame = 1
Query: 19 AAQSQYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDMDDLERVL 315
AA S+YGCGSCGPRGFYGTIDVH ++E+ +A F G+++AI YSD A+ +SSTI AFAK+GDL VVD+GV E + TG+ LSR+ V+ F+HNDM+DL RVL
Sbjct: 19 AAMSKYGCGSCGPRGFYGTIDVHLQLEESIAKFTGSDQAILYSDGASAVSSTIAAFAKRGDLLVVDEGVYEPLVTGVTLSRANVKWFRHNDMEDLRRVL 117
BLAST of mRNA_E-fasciculatus_F_contig15129.3637.1 vs. uniprot
Match: A0A1E7EQ19_9STRA (PLP-dependent transferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EQ19_9STRA) HSP 1 Score: 134 bits (338), Expect = 9.510e-36 Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 1
Query: 22 AQSQYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDMDDLERVLK 318
A ++YGCGSCGPRGFYGTID H +IE+E++ F T++AI YSD A+T SSTI AFAK+GD+ VVD+GV E + TG+ LSR+ V F+HND+DDLERVLK
Sbjct: 37 ALNKYGCGSCGPRGFYGTIDAHLQIEEEISKFCHTDQAILYSDGASTCSSTIAAFAKRGDVLVVDEGVYEPLSTGVYLSRANVHWFRHNDVDDLERVLK 135
BLAST of mRNA_E-fasciculatus_F_contig15129.3637.1 vs. uniprot
Match: A0A448Z2M4_9STRA (Aminotran_1_2 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z2M4_9STRA) HSP 1 Score: 135 bits (340), Expect = 6.440e-35 Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 1
Query: 22 AQSQYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDMDDLERVLK 318
A ++YGCGSCGPRGFYGTIDVH +IE+E++ F T++AI YSD A+ SST+ AFAK+GDL VVD+GV E + TG+ LSR+ V F+HNDM+DLERVLK
Sbjct: 268 ALNKYGCGSCGPRGFYGTIDVHLQIEEEISRFCXTDQAILYSDGASACSSTVAAFAKRGDLLVVDEGVYEPLSTGVYLSRANVHWFRHNDMEDLERVLK 366
BLAST of mRNA_E-fasciculatus_F_contig15129.3637.1 vs. uniprot
Match: UPI0010AADFE3 (long chain base biosynthesis protein 1-like isoform X1 n=3 Tax=Malus domestica TaxID=3750 RepID=UPI0010AADFE3) HSP 1 Score: 130 bits (327), Expect = 6.550e-35 Identity = 61/105 (58.10%), Postives = 80/105 (76.19%), Query Frame = 1
Query: 4 VSSCFAAQSQYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDMDDLERVLK 318
+ SC +A +YG GSCGPRGFYGTIDVH E +A F+GT ++I YS +T+ S IPAFAKKGD+ VVD+GV +Q G++LSRST++ FKHNDM+DL ++LK
Sbjct: 129 LESCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIANFLGTPDSILYSYGLSTMFSAIPAFAKKGDIIVVDEGVHWGIQNGLHLSRSTIKYFKHNDMEDLRKILK 233
BLAST of mRNA_E-fasciculatus_F_contig15129.3637.1 vs. uniprot
Match: A0A1Z5JIT6_FISSO (Serine palmitoyltransferase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JIT6_FISSO) HSP 1 Score: 134 bits (336), Expect = 1.460e-34 Identity = 60/98 (61.22%), Postives = 81/98 (82.65%), Query Frame = 1
Query: 22 AQSQYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDMDDLERVL 315
A +YGCGSCGPRGFYGT+DVH ++E +A F+GT++AI YSD A+T+SST+ AFAK+GDL V D+G+ E + TG++LSR+ V+ FKHNDM DL++VL
Sbjct: 210 ALDKYGCGSCGPRGFYGTVDVHLELESAMAKFIGTDDAILYSDGASTVSSTVAAFAKRGDLIVADEGIYEPLMTGVSLSRANVKWFKHNDMADLQKVL 307
BLAST of mRNA_E-fasciculatus_F_contig15129.3637.1 vs. uniprot
Match: A0A1V9YDK3_9STRA (Serine palmitoyltransferase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YDK3_9STRA) HSP 1 Score: 132 bits (331), Expect = 4.570e-34 Identity = 61/99 (61.62%), Postives = 78/99 (78.79%), Query Frame = 1
Query: 22 AQSQYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDMDDLERVLK 318
A ++YGCGSCGPRGFYGTID H +E ++A F+GT ++I++SD T SS +PAFAK+GDL VVD GV +++ TG+NL+R T FKHNDM DLERVLK
Sbjct: 156 ALTKYGCGSCGPRGFYGTIDTHELLEKDIAKFIGTTDSITFSDIEATASSVLPAFAKRGDLIVVDDGVNDSILTGVNLARCTTLYFKHNDMGDLERVLK 254
BLAST of mRNA_E-fasciculatus_F_contig15129.3637.1 vs. uniprot
Match: A0A067CM92_SAPPC (Aminotran_1_2 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CM92_SAPPC) HSP 1 Score: 132 bits (331), Expect = 4.800e-34 Identity = 61/99 (61.62%), Postives = 79/99 (79.80%), Query Frame = 1
Query: 22 AQSQYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDSATTISSTIPAFAKKGDLTVVDQGVEENVQTGINLSRSTVRTFKHNDMDDLERVLK 318
A ++YGCGSCGPRGFYGTID H +E ++A F+GT ++I++SD T SS +PAFAK+GDL VVD GV ++++TG+NL+R T FKHNDM DLERVLK
Sbjct: 162 ALTKYGCGSCGPRGFYGTIDTHEILEKDIAHFIGTTDSITFSDIEATASSVLPAFAKRGDLIVVDDGVNDSIRTGVNLARCTTLYFKHNDMADLERVLK 260 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15129.3637.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15129.3637.1 >prot_E-fasciculatus_F_contig15129.3637.1 ID=prot_E-fasciculatus_F_contig15129.3637.1|Name=mRNA_E-fasciculatus_F_contig15129.3637.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=106bp FVSSCFAAQSQYGCGSCGPRGFYGTIDVHTKIEDEVAAFMGTEEAISYSDback to top mRNA from alignment at E-fasciculatus_F_contig15129:1774..2681- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15129.3637.1 ID=mRNA_E-fasciculatus_F_contig15129.3637.1|Name=mRNA_E-fasciculatus_F_contig15129.3637.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=908bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15129:1774..2681- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15129:1774..2681- >mRNA_E-fasciculatus_F_contig15129.3637.1 ID=mRNA_E-fasciculatus_F_contig15129.3637.1|Name=mRNA_E-fasciculatus_F_contig15129.3637.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=636bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15129:1774..2681- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |