mRNA_E-fasciculatus_F_contig15114.3628.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15114.3628.1 vs. uniprot
Match: D8LFV7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFV7_ECTSI) HSP 1 Score: 110 bits (276), Expect = 1.130e-26 Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = 1
Query: 16 DRRDYDMHRLAREDKLKGKKLXXXXXXKEAAREKAPGQDFRVDVADERFAALLEGDTRFGIDRTDSSFK 222
DRRDYDMHRLARE+KLKGK XXXXXX AAREKAPGQDFRVDVADERFAALLEGDTRFGIDRTDSSFK
Sbjct: 766 DRRDYDMHRLAREEKLKGKXXXXXXXXXXAAREKAPGQDFRVDVADERFAALLEGDTRFGIDRTDSSFK 834
BLAST of mRNA_E-fasciculatus_F_contig15114.3628.1 vs. uniprot
Match: A0A835YR83_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR83_9STRA) HSP 1 Score: 74.3 bits (181), Expect = 8.010e-14 Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 1
Query: 10 EEDRRDYDMHRLAREDKLKGKKLXXXXXXKEAAREKAPGQDFRVDVADERFAALLEGDTRF 192
EED R++DM L RE+K+KGKKL KE AR++APGQ F VDV D+RFAA+LEGD+RF
Sbjct: 618 EEDERNFDMRALMREEKVKGKKLRGKRKRKEEARDRAPGQGFNVDVKDDRFAAVLEGDSRF 678
BLAST of mRNA_E-fasciculatus_F_contig15114.3628.1 vs. uniprot
Match: I2CPY8_NANGC (NUC153 domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPY8_NANGC) HSP 1 Score: 65.5 bits (158), Expect = 1.980e-11 Identity = 44/73 (60.27%), Postives = 50/73 (68.49%), Query Frame = 1
Query: 7 EEEDRRDYDMHRLAREDKLKGKKLXXXXXXKEAAREKA-PGQDFRVDVADERFAALLEGDTRFGIDRTDSSFK 222
EEE RRD+DM L R +KLKGK XXXXXX A PGQDFRVD +D RFAAL EGD R+GI+ T +K
Sbjct: 78 EEEGRRDFDMRALERTEKLKGKXXXXXXXXXXXXXXXAVPGQDFRVDTSDSRFAALFEGDARYGIETTSKEYK 150
BLAST of mRNA_E-fasciculatus_F_contig15114.3628.1 vs. uniprot
Match: A0A4D9D496_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D496_9STRA) HSP 1 Score: 66.6 bits (161), Expect = 4.080e-11 Identity = 44/73 (60.27%), Postives = 51/73 (69.86%), Query Frame = 1
Query: 7 EEEDRRDYDMHRLAREDKLKGKKLXXXXXXKEAAREKA-PGQDFRVDVADERFAALLEGDTRFGIDRTDSSFK 222
EEE RRD+DM L R ++LKGKK XXXXXX A PGQDFRVD +D RFAAL EGD R+GI+ T +K
Sbjct: 689 EEEGRRDFDMRALERTERLKGKKXXXXXXXXXXXXXXAVPGQDFRVDTSDSRFAALFEGDARYGIETTSKEYK 761
BLAST of mRNA_E-fasciculatus_F_contig15114.3628.1 vs. uniprot
Match: A0A1Z5KDP7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDP7_FISSO) HSP 1 Score: 62.4 bits (150), Expect = 1.260e-9 Identity = 38/69 (55.07%), Postives = 46/69 (66.67%), Query Frame = 1
Query: 22 RDYDMHRLAREDKLKGKKLXXXXXXKEAAREK-APGQDFRVDVADERFAALLEG-DTRFGIDRTDSSFK 222
+DY+M L R ++ KGKKL KE R K G DF+VDV DERF A+L+G D RFGIDRTD +FK
Sbjct: 643 KDYNMKDLERLERNKGKKLTGSRKRKEELRAKNTVGTDFKVDVEDERFKAVLDGQDGRFGIDRTDPNFK 711
BLAST of mRNA_E-fasciculatus_F_contig15114.3628.1 vs. uniprot
Match: A0A1E7F590_9STRA (NUC153 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F590_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 8.240e-9 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 1
Query: 7 EEEDRRDYDMHRLAREDKLKGKKLXXXXXXKEAA-REKAPGQDFRVDVADERFAALLEG-DTRFGIDRTDSSFK 222
E+E+ RDYD+ + R +K KGKKL KEA G F+VD D RF A+L+G D RFGID+TD SFK
Sbjct: 636 EDEEARDYDIRGIQRMEKNKGKKLTGSRKRKEAKIAADVSGSSFKVDTKDNRFQAVLDGSDARFGIDKTDPSFK 709
BLAST of mRNA_E-fasciculatus_F_contig15114.3628.1 vs. uniprot
Match: A0A7S1FMP2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMP2_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 1.620e-8 Identity = 43/77 (55.84%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 10 EEDRRDYDMHRLAREDK-----LKGKKLXXXXXXKEAAREKAPGQDFRVDVADERFAALLEG-DTRFGIDRTDSSFK 222
EED RDYDM L + ++ L+GK+LXXXXXX R G +F+VDVAD+RFAA+L+G D RFGI RTD +FK
Sbjct: 14 EEDARDYDMRGLRKAERDAAKALRGKRLXXXXXXXXEVR----GGEFQVDVADDRFAAVLDGEDARFGITRTDPAFK 86
BLAST of mRNA_E-fasciculatus_F_contig15114.3628.1 vs. uniprot
Match: B7GAK3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GAK3_PHATC) HSP 1 Score: 56.6 bits (135), Expect = 1.370e-7 Identity = 35/69 (50.72%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 22 RDYDMHRLAREDKLKGKKLXXXXXXKEAA-REKAPGQDFRVDVADERFAALLEG-DTRFGIDRTDSSFK 222
RDYDM L R +K K KK E A G +F VD +D+RF A+L+G D RFGIDRTD SFK
Sbjct: 566 RDYDMRGLQRLEKNKDKKFTGSRKRNEVALAANVTGTEFHVDTSDQRFKAVLDGTDDRFGIDRTDPSFK 634 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15114.3628.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15114.3628.1 >prot_E-fasciculatus_F_contig15114.3628.1 ID=prot_E-fasciculatus_F_contig15114.3628.1|Name=mRNA_E-fasciculatus_F_contig15114.3628.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=74bp QEEEEDRRDYDMHRLAREDKLKGKKLRGKRKRKEAAREKAPGQDFRVDVAback to top mRNA from alignment at E-fasciculatus_F_contig15114:179..400- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15114.3628.1 ID=mRNA_E-fasciculatus_F_contig15114.3628.1|Name=mRNA_E-fasciculatus_F_contig15114.3628.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=222bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15114:179..400- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15114:179..400- >mRNA_E-fasciculatus_F_contig15114.3628.1 ID=mRNA_E-fasciculatus_F_contig15114.3628.1|Name=mRNA_E-fasciculatus_F_contig15114.3628.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=444bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15114:179..400- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |