prot_E-fasciculatus_F_contig15073.3598.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig15073.3598.1
Unique Nameprot_E-fasciculatus_F_contig15073.3598.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length224
Homology
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BLAST of mRNA_E-fasciculatus_F_contig15073.3598.1 vs. uniprot
Match: D7G1V7_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V7_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 5.320e-16
Identity = 41/48 (85.42%), Postives = 43/48 (89.58%), Query Frame = 0 
Query:    9 APSAIGLEPGDGDQHGYDKWAMPPVPDSMRGSFGLPRGVGVSRGSGGG 56
            APSAIGLEPG+GDQ+GYDKWAMPPVPDSMRGSF LPRG G  RGSG G
Sbjct:  395 APSAIGLEPGEGDQNGYDKWAMPPVPDSMRGSFCLPRGGGGPRGSGSG 442
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15073.3598.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1V7_ECTSI5.320e-1685.42Myb-like DNA-binding domain containing protein n=1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig15073contigE-fasciculatus_F_contig15073:1477..2897 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig15073.3598.1mRNA_E-fasciculatus_F_contig15073.3598.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig15073 1477..2898 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig15073.3598.1 ID=prot_E-fasciculatus_F_contig15073.3598.1|Name=mRNA_E-fasciculatus_F_contig15073.3598.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=224bp
AAAEAAAAAPSAIGLEPGDGDQHGYDKWAMPPVPDSMRGSFGLPRGVGVS
RGSGGGTHWTTPPSPLGGGRGNSSGGGGGGSGAYSTLFNASSLANPPRSP
YSTNQPADSNGGGDSGKGAAERASTPTSSSAQAADASVPAVVTAATTAAS
AAAAAAAARGNKYPAHLSGARYPMPPPGYYLGPGAAGSGAGGGGGSGSSS
SGGGRVDDGAAPCHSPPPLGVGGG
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