prot_E-fasciculatus_F_contig1507.3594.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1507.3594.1
Unique Nameprot_E-fasciculatus_F_contig1507.3594.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length286
Homology
[Close]
BLAST of mRNA_E-fasciculatus_F_contig1507.3594.1 vs. uniprot
Match: D7FLR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR8_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 3.420e-57
Identity = 102/141 (72.34%), Postives = 115/141 (81.56%), Query Frame = 0 
Query:  145 AMDGDKSGEHYDNFDDEDKEEEYAYNDGTCDDRSCTFCCGRENGQSNYSTSCRLDGDEEERRGGPGVSWGGASSSVGTASTGTMSWYTQDRSHYQESQVVSEGKEQEEEVAGEGRRWRGEGEYDDNDVEMARRLLCAALGS 285
            AM+GD+SG+H +NFDDE+         GTC DR CTFC GRE+GQ NYSTSC+LDGDE++R GGPG S GG SSSV TASTGTMSWYTQ+R +YQE QV+SEG+EQEEEV  EG   RGEGEYDDNDVEMARRLLCAALGS
Sbjct:    6 AMNGDRSGDHCENFDDENNXXXXXXX-GTCGDRYCTFCSGREHGQRNYSTSCQLDGDEDDR-GGPGASLGGVSSSVCTASTGTMSWYTQNRGYYQEGQVLSEGEEQEEEVVREGGLGRGEGEYDDNDVEMARRLLCAALGS 144
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1507.3594.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLR8_ECTSI3.420e-5772.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..74
NoneNo IPR availableCOILSCoilCoilcoord: 96..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1507contigE-fasciculatus_F_contig1507:12263..15869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1507.3594.1mRNA_E-fasciculatus_F_contig1507.3594.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1507 12263..15869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1507.3594.1 ID=prot_E-fasciculatus_F_contig1507.3594.1|Name=mRNA_E-fasciculatus_F_contig1507.3594.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=286bp
LSAKIEGQATRGSIAIMTWPQDEHYAGKRCVNEQCMARGVAQGHCRVCQC
QQQLEQREYHEEEEERQYQQLLEQQYHSSLSRQHQQQYQHHQQQRGQELL
RRHQQQQQQRQRQEQEQEQELLRRHHQQQQQQQQQQQQQQLMMMAMDGDK
SGEHYDNFDDEDKEEEYAYNDGTCDDRSCTFCCGRENGQSNYSTSCRLDG
DEEERRGGPGVSWGGASSSVGTASTGTMSWYTQDRSHYQESQVVSEGKEQ
EEEVAGEGRRWRGEGEYDDNDVEMARRLLCAALGS*
back to top