mRNA_E-fasciculatus_F_contig15059.3585.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15059.3585.1 vs. uniprot
Match: D7FT77_ECTSI (Aspartate--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT77_ECTSI) HSP 1 Score: 208 bits (530), Expect = 3.030e-62 Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 1
Query: 1 GDLPLVQSSEMTGKTFCPVGDLTSAKAGEEIWLRARVHTSRW--KGVFLVLRQALYTVQATVFVGGNVGRPMVQYAEDMSKESVIDVRGTLVVTPSPVSGCTQKEVELKIEE 330
GDLP+VQSSEMTGKTFCPVGDLTSAKAGEEIWLRARVHTSR KGVFLVLRQALYTVQATVFVGGNVGRPMVQYAED+SKESVIDVRGTLVVTPSPVSGCTQKEVELKIEE
Sbjct: 135 GDLPMVQSSEMTGKTFCPVGDLTSAKAGEEIWLRARVHTSRSIKKGVFLVLRQALYTVQATVFVGGNVGRPMVQYAEDVSKESVIDVRGTLVVTPSPVSGCTQKEVELKIEE 246
BLAST of mRNA_E-fasciculatus_F_contig15059.3585.1 vs. uniprot
Match: A0A7S3XT61_HETAK (Aspartate--tRNA ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT61_HETAK) HSP 1 Score: 122 bits (305), Expect = 3.920e-30 Identity = 59/112 (52.68%), Postives = 81/112 (72.32%), Query Frame = 1
Query: 1 GDLPLVQSSEMTGKTFCPVGDLTSAKAGEEIWLRARVHTSRW--KGVFLVLRQALYTVQATVFVGGNVGRPMVQYAEDMSKESVIDVRGTLVVTPSPVSGCTQKEVELKIEE 330
GD PL+ SS +TG+ F + + ++A +E+W+RARVHTSR KG FL+LRQ LYTVQ T+F G V + MV+YA + +ES+ID+RG +VV PSP+ TQK+VEL+I E
Sbjct: 109 GDYPLINSSGLTGRVFLRIHQIDKSRADQEVWVRARVHTSRGVGKGCFLLLRQTLYTVQCTMFQGEGVSKGMVKYATALPRESIIDIRGKVVVAPSPIDSATQKDVELQILE 220
BLAST of mRNA_E-fasciculatus_F_contig15059.3585.1 vs. uniprot
Match: A0A1I8BCL8_MELHA (Aspartyl-tRNA synthetase n=1 Tax=Meloidogyne hapla TaxID=6305 RepID=A0A1I8BCL8_MELHA) HSP 1 Score: 103 bits (258), Expect = 2.230e-25 Identity = 50/112 (44.64%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 1 GDLPLVQSSEMTGKT-FCPVGDLTSAKAGEEIWLRARVHTSRWKG--VFLVLRQALYTVQATVFVGGNVGRPMVQYAEDMSKESVIDVRGTLVVTPSPVSGCTQKEVELKIE 327
G+ P++QS E F + ++ + G+E+WLRAR+H SR KG F+ LRQ +Y+VQ +FVGG + + V++A+++SKES++D+ G + TPSPVS CTQ +VE+KI+
Sbjct: 9 GNYPIIQSKEKHEDIEFINIQNIGAELDGKEVWLRARIHDSRGKGKNCFICLRQRIYSVQGVLFVGGEITKEFVKFAQNISKESLVDIFGQISKTPSPVSSCTQSDVEIKIQ 120
BLAST of mRNA_E-fasciculatus_F_contig15059.3585.1 vs. uniprot
Match: A0A6V7W8Z8_9BILA (Aspartate--tRNA ligase, cytoplasmic n=2 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7W8Z8_9BILA) HSP 1 Score: 106 bits (265), Expect = 8.740e-25 Identity = 53/112 (47.32%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 1 GDLPLVQSSEMTGKT-FCPVGDLTSAKAGEEIWLRARVHTSRWKG--VFLVLRQALYTVQATVFVGGNVGRPMVQYAEDMSKESVIDVRGTLVVTPSPVSGCTQKEVELKIE 327
G+ P++QS E F + D+ + G+EIWLRAR+H SR KG F+ LRQ +Y+VQ +FVGG + + V++A+++SKES++DV G + TPSPVS CTQ +VE+KI+
Sbjct: 13 GNYPIMQSKEKHEDIKFINIQDIGAELDGKEIWLRARIHDSRGKGKNCFICLRQRIYSVQGVLFVGGEITKEFVKFAQNISKESLVDVFGQITKTPSPVSSCTQSDVEIKIQ 124
BLAST of mRNA_E-fasciculatus_F_contig15059.3585.1 vs. uniprot
Match: A0A812VS85_9DINO (Aspartate--tRNA ligase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VS85_9DINO) HSP 1 Score: 105 bits (263), Expect = 2.230e-24 Identity = 50/110 (45.45%), Postives = 78/110 (70.91%), Query Frame = 1
Query: 1 GDLPLVQSSEMTGKTFCPVGDLTSAKAGEEIWLRARVHTSRWKG--VFLVLRQALYTVQATVFVGGNVGRPMVQYAEDMSKESVIDVRGTLVVTPSPVSGCTQKEVELKI 324
GD P++QS E++G+T+ +G++T A G+ I +RARVHT R KG VFLVLRQ ++TVQA +F G + + M++Y +S+ESV+DV T+ P P++ C+ K +EL++
Sbjct: 88 GDTPVIQSREISGRTWTRLGEVTDAHVGQTILVRARVHTLRAKGKAVFLVLRQGVHTVQAVLFQGKDTPKEMIKYVSGISRESVVDVSATVSAVPEPIAACSIKSLELQV 197
BLAST of mRNA_E-fasciculatus_F_contig15059.3585.1 vs. uniprot
Match: A0A7S3BRT7_9VIRI (Aspartyl-tRNA synthetase (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BRT7_9VIRI) HSP 1 Score: 99.8 bits (247), Expect = 5.780e-24 Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = 1
Query: 1 GDLPLVQSSEMTGKTFCPVGDLTSAKAGEEIWLRARVHTSRWKG--VFLVLRQALYTVQATVFVGG-NVGRPMVQYAEDMSKESVIDVRGTLVVTPSPVSGCTQKEVELKI 324
G LPL+ SS TG+T+ V D+ S+ AG I +RARVH R KG FLVLRQ TVQ +F G ++ +PMV++A +++KESV+DV +V SPV+GC+Q +VEL +
Sbjct: 77 GKLPLMNSSVKTGRTWTNVCDVGSSMAGTRILVRARVHAVRGKGKSAFLVLRQRTATVQVVMFADGEHISKPMVKFASNLTKESVVDVSAEVVKPDSPVTGCSQSDVELNV 187
BLAST of mRNA_E-fasciculatus_F_contig15059.3585.1 vs. uniprot
Match: F1KUN3_ASCSU (Aspartate--tRNA ligase, cytoplasmic n=4 Tax=Ascaridoidea TaxID=33256 RepID=F1KUN3_ASCSU) HSP 1 Score: 103 bits (257), Expect = 1.410e-23 Identity = 53/110 (48.18%), Postives = 75/110 (68.18%), Query Frame = 1
Query: 1 GDLPLVQSSEMTGKTFCPVGDLTSAKAGEEIWLRARVHTSRWKG--VFLVLRQALYTVQATVFVGGNVGRPMVQYAEDMSKESVIDVRGTLVVTPSPVSGCTQKEVELKI 324
G PLVQS+E F V ++T+A G+EIW+R R+HTSR KG F+V+RQ ++TVQA +FVG V + M++Y ++SKES+IDVRG + + CTQK+VEL +
Sbjct: 65 GTYPLVQSAEKKHLEFVDVENVTAAVDGKEIWVRGRLHTSRSKGKTCFIVVRQRVHTVQAMLFVGEKVSKQMLKYVSNISKESIIDVRGVVRKVDEEIVSCTQKDVELHV 174
BLAST of mRNA_E-fasciculatus_F_contig15059.3585.1 vs. uniprot
Match: A0A7M7MXI6_STRPU (Aspartate--tRNA ligase, cytoplasmic n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7MXI6_STRPU) HSP 1 Score: 103 bits (256), Expect = 1.920e-23 Identity = 49/112 (43.75%), Postives = 73/112 (65.18%), Query Frame = 1
Query: 1 GDLPLVQSSEMTGKTFCPVGDLTSAKAGEEIWLRARVHTSRWKG--VFLVLRQALYTVQATVFVGGNVGRPMVQYAEDMSKESVIDVRGTLVVTPSPVSGCTQKEVELKIEE 330
G+ PL+QS + V +LT+ K +++W+RAR+HTSR KG FLVLRQ + Q + V V +PMV++A +++KES++DV G + P P+ CTQK+VEL IE+
Sbjct: 60 GNYPLIQSQNKIERKIYRVEELTADKIDQKVWIRARLHTSRSKGKQCFLVLRQQQFNCQGLLCVSDKVSKPMVKFAANITKESIVDVEGVIAAVPQPIESCTQKDVELHIEQ 171
BLAST of mRNA_E-fasciculatus_F_contig15059.3585.1 vs. uniprot
Match: UPI0002657794 (aspartate--tRNA ligase, cytoplasmic n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002657794) HSP 1 Score: 100 bits (249), Expect = 1.770e-22 Identity = 47/108 (43.52%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 1 GDLPLVQSSEMTGKTFCPVGDLTSAKAGEEIWLRARVHTSRWKG--VFLVLRQALYTVQATVFVGGNVGRPMVQYAEDMSKESVIDVRGTLVVTPSPVSGCTQKEVEL 318
G ++QSSE +T P+ TS G+E+W+R R+H SR KG FL+LRQA ++Q + VG NV R M+++ ++ KES+IDV G ++ TPS + C+Q++VEL
Sbjct: 62 GSYGMIQSSERLERTLTPISSCTSKLVGQEVWVRGRIHVSRSKGKQCFLILRQACCSIQCVLAVGENVSREMLKFVSNIPKESIIDVCGKVMATPSKIDSCSQQDVEL 169
BLAST of mRNA_E-fasciculatus_F_contig15059.3585.1 vs. uniprot
Match: A0A6F9DB58_9ASCI (Aspartate--tRNA ligase, cytoplasmic n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DB58_9ASCI) HSP 1 Score: 100 bits (249), Expect = 1.890e-22 Identity = 47/111 (42.34%), Postives = 73/111 (65.77%), Query Frame = 1
Query: 1 GDLPLVQSSEMTGKTFCPVGDLTSAKAGEEIWLRARVHTSRWKG--VFLVLRQALYTVQATVFVGGNVGRPMVQYAEDMSKESVIDVRGTLVVTPSPVSGCTQKEVELKIE 327
GD+ ++QS+E + PVGD+TSA A ++IW+R R+HTSR G F+V+R +TVQ VFVG + + MV++ +++KES+IDV G + + CTQ +VE+ I+
Sbjct: 91 GDMKMIQSTEKLDRVLVPVGDITSASAEKDIWIRGRLHTSRGTGKQCFIVVRHQQWTVQGLVFVGEAISKQMVKFCANITKESIIDVFGVVKTVEQKIESCTQSDVEIHIK 201 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15059.3585.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15059.3585.1 >prot_E-fasciculatus_F_contig15059.3585.1 ID=prot_E-fasciculatus_F_contig15059.3585.1|Name=mRNA_E-fasciculatus_F_contig15059.3585.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=100bp MTGKTFCPVGDLTSAKAGEEIWLRARVHTSRWKGVFLVLRQALYTVQATVback to top mRNA from alignment at E-fasciculatus_F_contig15059:3..748- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15059.3585.1 ID=mRNA_E-fasciculatus_F_contig15059.3585.1|Name=mRNA_E-fasciculatus_F_contig15059.3585.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=746bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15059:3..748- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15059:3..748- >mRNA_E-fasciculatus_F_contig15059.3585.1 ID=mRNA_E-fasciculatus_F_contig15059.3585.1|Name=mRNA_E-fasciculatus_F_contig15059.3585.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=600bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15059:3..748- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |