mRNA_E-fasciculatus_F_contig1503.3565.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1503.3565.1 vs. uniprot
Match: D8LFT7_ECTSI (Plastid phosphoglycerate mutase protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFT7_ECTSI) HSP 1 Score: 609 bits (1570), Expect = 3.190e-218 Identity = 309/323 (95.67%), Postives = 314/323 (97.21%), Query Frame = 3
Query: 147 MRRPGRPRPAPGGFLLALATARKSFTRAFCFGGGSSGGNVGKRLFRGTAAESSAAKASTGPRSLATATPPESPFPP-GDDGELVSFFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSELSKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWERAGNAWDQIRSLQSIQDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQWRRGEARAERYRWVVPEASGFVEAADAARLLKDGEDDNRYTL 1112
MRRPGRPRPAPGGFL+ALATARKSFTRAFCFGGGSS +VGKRLFR TAAESSA KA TGPR LATATPPESPFPP GDDGEL SFFLLRHGQTNFNAIGRIQGTLDSSILTE+GISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSE+SKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLW+RA NAWDQIRSLQSIQDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQWRRGEARAERYRWVVPEASGFVEAADAARLLKDGEDDNRYTL
Sbjct: 1 MRRPGRPRPAPGGFLIALATARKSFTRAFCFGGGSSS-SVGKRLFRSTAAESSA-KAGTGPRGLATATPPESPFPPAGDDGELESFFLLRHGQTNFNAIGRIQGTLDSSILTEEGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSEISKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWKRASNAWDQIRSLQSIQDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQWRRGEARAERYRWVVPEASGFVEAADAARLLKDGEDDNRYTL 321
BLAST of mRNA_E-fasciculatus_F_contig1503.3565.1 vs. uniprot
Match: Q00GN2_KARBR (Plastid phosphoglycerate mutase protein (Fragment) n=1 Tax=Karenia brevis TaxID=156230 RepID=Q00GN2_KARBR) HSP 1 Score: 179 bits (453), Expect = 3.220e-49 Identity = 105/243 (43.21%), Postives = 144/243 (59.26%), Query Frame = 3
Query: 399 FFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSELSKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWERAGNAWDQIRSLQSIQDQPR-----TLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQWRRGEARAERYRWVVP--EASGFVEAADAARLLKDGEDDNRY 1106
+ +LRHG+TNFNA G +QG+ D S LTE+G +QA +AG LA+ +DL + V VSP+ RA TLE V Q L S +P++REI+L+ W+G+ KED+ + P+ Y +W + +F G YP +LW+RA AW IR+ + D R TL+V HN I QAL ++A+G D +YFR+LS+PN LE W GE A R+RW +P EAS +A AA L D RY
Sbjct: 99 YLILRHGETNFNAKGILQGSSDISRLTEKGQAQANKAGMELATLSDLPI-EQVFVSPLTRATSTLELVAQSLPCS-----LPEAITLPELREIDLYSWEGKQKEDLKREMPDTYQAWKSADPDFVVDGHYPLVELWQRAKEAWAAIRASE---DGKRDIDGVTLIVCHNGIGQALFFSAIGLDASYFRQLSFPNAGALECDWPLGELHASRWRWRLPLDEASSEWRSATAASL---DASDGRY 329
BLAST of mRNA_E-fasciculatus_F_contig1503.3565.1 vs. uniprot
Match: A0A7S0F1H7_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0F1H7_9CRYP) HSP 1 Score: 171 bits (434), Expect = 7.530e-46 Identity = 97/218 (44.50%), Postives = 140/218 (64.22%), Query Frame = 3
Query: 399 FFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSELSKDFETVEIV-PDIREIELFEWQGQLKEDIIKNNPEQYASWVAD-PSNFNF-SGRYPARDLWERAGNAWDQIRSLQSIQDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQWRRGEARAERYRWVVPEAS 1043
F +LRHG+TN+NA GRIQG+ D S LTE+G +QA G L S +D +V VSP+ RA++TLE L ++ L ++ IV D+RE++L+EW+G LK++I + P+ Y+ W + P F SG+YP RDLW+RA N WD +R + + TL+VAHN INQALL T LG +FRKL +PNC + E+ G+++A+++RW+ P S
Sbjct: 158 FLILRHGKTNYNAEGRIQGSTDFSRLTEEGEAQASSVGGIL-SEIHID---SVFVSPLTRARRTLE-----LAEAGLGRNLSGSAIVLDDLREVDLYEWEGMLKKEIKEMYPDIYSLWRGENPRQFKLDSGKYPIRDLWKRASNVWDVLR--RDATNGKTTLIVAHNGINQALLCTTLGLSEEFFRKLEFPNCGIAEVIIPHGQSKAKQWRWLYPTPS 364
BLAST of mRNA_E-fasciculatus_F_contig1503.3565.1 vs. uniprot
Match: A0A7S4C0X0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C0X0_CHRCT) HSP 1 Score: 162 bits (411), Expect = 1.310e-43 Identity = 101/261 (38.70%), Postives = 140/261 (53.64%), Query Frame = 3
Query: 324 GPRSLATATPPESPFPPGDDGELVSFFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSELSKDFETVEIV-PDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWERAGNAWDQIRSLQSIQDQPRT---LVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQWRRG--------------EARAERYRWVVPEASGFV 1052
G S A PP S P G F +LRHG+TN NA G IQG+ D S+LT++G QA AG+ LA V VSP+ RA+ TLE R+ + T EIV D+RE++L++W+G+ K D+ + P++Y +W P F+ SG+ P DLW RA N W +I S + + P + LVV H+ I QALL TALG D FR+ + PNC +EL+W G + A R+RW++P S +
Sbjct: 14 GRASSAALQPPTSAAP----GAGCKFVILRHGETNHNADGIIQGSSDVSVLTDKGKEQARRAGEQLAELYQEGSISKVFVSPLSRARDTLELCRK-------TAPLPTGEIVLADLREVDLWDWEGRNKADLRRERPDEYEAWKGQPLLFSVSGKKPIVDLWARARNVWREIHS--QVPEDPSSGTILVVCHSGIGQALLSTALGEDERSFRRRALPNCGAVELEWIDGYVASTDGGVASMDSDCLANRWRWLIPNTSEWT 261
BLAST of mRNA_E-fasciculatus_F_contig1503.3565.1 vs. uniprot
Match: A0A7S4I552_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I552_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.610e-43 Identity = 93/249 (37.35%), Postives = 140/249 (56.22%), Query Frame = 3
Query: 372 PGDDGELVSFFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKTLASYAD----LDLGPT--VVVSPMGRAQQTLECVRQELRKSELSKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASW-VADPSNFNFSGRYPARDLWERAGNAWDQIRSLQSI-------QDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQWRRGEARAERYRWVVPEASGFVEAADAARL 1076
P L +F+LRHG+T+ NA GRIQG+ D S LTE+G SQA G + +D +D GP V SP+ RAQ+TL+ +R+ S + + E V + ++REI+L++W+G+ +I +N+PE YA+W + D SG P ++W RAG W+ IRS ++ ++ TL+V H + Q LL +ALG D T+FR+ +PNC + E+ W E A +RW P S ++ D L
Sbjct: 33 PPSSASLHRYFILRHGETDANASGRIQGSADFSRLTERGQSQAARVGSVVFGGSDGEGSID-GPIRHVYASPLTRAQETLQIIREHADPSLIPGEGEIV--LDELREIDLYDWEGRHTSEIEENDPEAYAAWTMGDAHGMEVSGCKPIVEMWARAGRVWEIIRSANAVAGRTDSDENPSSTLLVCHGTLGQGLLSSALGLDETHFRRHDFPNCGMAEIVWYHDEEIARNWRWHHPSRSELMQPFDQTVL 278
BLAST of mRNA_E-fasciculatus_F_contig1503.3565.1 vs. uniprot
Match: L1ISC6_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1ISC6_GUITC) HSP 1 Score: 151 bits (381), Expect = 4.220e-40 Identity = 88/198 (44.44%), Postives = 125/198 (63.13%), Query Frame = 3
Query: 399 FFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSELSKDFETVEIVPDIREIELFEWQGQLKEDIIKNN-PEQYASWVAD-PSNFNF-SGRYPARDLWERAGNAWDQIRSLQSIQDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLEL 983
F LRHG+TN+NA GRIQG+ D S LTE+G +QA G+ L+ D+ + +V VSP+ RA+ TLE ++ LS ++ ++ D+RE++L EW+G LK+ IK P+ Y+ W + P F SG+YP RDLW+RAG W+ +R + + +L+VAHN INQALL T LG YFRKL +PNC + E+
Sbjct: 17 FLFLRHGKTNYNAEGRIQGSTDFSRLTEEGEAQASSVGRILS---DIPID-SVFVSPLTRARMTLELAAAGSGRN-LS---DSAMVLDDLREVDLHEWEGMLKKQEIKEMYPDIYSLWRGENPREFKLDSGKYPIRDLWKRAGKVWEVLR--RDAANGKTSLIVAHNGINQALLCTTLGLSEEYFRKLEFPNCGIAEV 204
BLAST of mRNA_E-fasciculatus_F_contig1503.3565.1 vs. uniprot
Match: R1DPI0_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DPI0_EMIHU) HSP 1 Score: 144 bits (362), Expect = 1.380e-36 Identity = 93/250 (37.20%), Postives = 133/250 (53.20%), Query Frame = 3
Query: 393 VSFFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSELSKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPAR-----DLWERAGNA-WDQIRSLQSI---QDQPRTLVVAHNAINQALLWTALGCDTTYFRKLS------------WPNCAVLELQWRRGEARAERYRWVVPEASGFVEAADAARLL 1079
V F +LRHGQT+ N G IQG+ D S L+++G +QA E G LA D+ + T + SP+ RAQQT E + + D T + +REI+L W+G+ K ++ P+ YA+W DP GR P +LWERA +A W +R++ + D+ TLVV H ++ QALL TALG D T +R+ +PNC + E+ W RA R+RW +PE G ++ AAR L
Sbjct: 20 VRFLVLRHGQTDHNRDGIIQGSSDVSRLSDRGRTQAREVGAALARLGDVRVARTFL-SPLARAQQTHEILLLD------RPDLPTPTTLDGLREIDLGSWEGRAKAELRAEQPDVYAAWQCDPLAMVVDGRRPRCRKPIVELWERARSAAWPTLRAVDTAAAEDDEGATLVVCHGSLGQALLCTALGLDATAWRRHRLARCTAERARHPFPNCGMAEIDWPADAPRATRWRWRLPE-EGCWQSGTAARAL 261
BLAST of mRNA_E-fasciculatus_F_contig1503.3565.1 vs. uniprot
Match: A0A812MB86_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812MB86_9DINO) HSP 1 Score: 140 bits (354), Expect = 1.160e-35 Identity = 92/229 (40.17%), Postives = 131/229 (57.21%), Query Frame = 3
Query: 399 FFLLRHGQTNFNAIGRIQGTLDS-SILTEQGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSELSKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWERAGNAWDQIRSLQSIQDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAVLELQWRRGEARAERYRWVVPEASGFVEAADAARLLK 1082
F L+RHGQT FNA R QG++D S+LT +GISQA E G+ L V VSP+ RA+QTLE R E+ ET + ++REI+L+EWQG+ +++I +PE W + N SGRY RDLW R+ AW ++R + ++ R+LVVAH AI +AL+ TALG FR L+ N V+E+ W EA+ +R + P+ + AD + +K
Sbjct: 22 FLLVRHGQTTFNAEKRFQGSMDEGSVLTAKGISQAEELGQWLKGNPVA----AVFVSPLLRARQTLEVARTVA--GEVLPPTETK--LSELREIDLYEWQGRTQDEIRAEDPELMRLWKEETWNLQVSGRYVVRDLWRRSIEAWHRMRQVAPSGEE-RSLVVAHGAIIKALISTALGLPEQGFRHLAMSNGEVVEVAWSGSEAK---WRKLHPDKGPWRCLADEEQAMK 238
BLAST of mRNA_E-fasciculatus_F_contig1503.3565.1 vs. uniprot
Match: A0A2J6K5X6_LACSA (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6K5X6_LACSA) HSP 1 Score: 142 bits (357), Expect = 7.630e-34 Identity = 87/203 (42.86%), Postives = 117/203 (57.64%), Query Frame = 3
Query: 366 FPPGDDGELVSFFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSELSKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWERAGNAWDQIRSLQSIQDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAV 974
FPP + V L+RHGQ+ +NA GRIQG+ D SILT++G +QA E + + D+ SP+ R+++T E + R+ E+ D D+REI+L+ +QG LK + I E +A W D NFN G YP R+LWERA N W++I I D LVVAHNA+NQAL+ TA+G T YFR L NC V
Sbjct: 73 FPPVKVAKRV--VLVRHGQSTWNAEGRIQGSSDFSILTQKGEAQA-ETSRQMLIDDSFDI---CFSSPLRRSKRTAEVIWGS-RQEEILTD-------SDLREIDLYSFQGLLKHEGISKYGEAFAQWQKDAPNFNIDGHYPVRELWERASNCWNKIL----IHDSRSVLVVAHNAVNQALVATAMGLGTEYFRILLQSNCGV 257
BLAST of mRNA_E-fasciculatus_F_contig1503.3565.1 vs. uniprot
Match: UPI0007EF521C (LOW QUALITY PROTEIN: probable 2-carboxy-D-arabinitol-1-phosphatase n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF521C) HSP 1 Score: 141 bits (355), Expect = 9.790e-34 Identity = 85/204 (41.67%), Postives = 116/204 (56.86%), Query Frame = 3
Query: 363 PFPPGDDGELVSFFLLRHGQTNFNAIGRIQGTLDSSILTEQGISQALEAGKTLASYADLDLGPTVVVSPMGRAQQTLECVRQELRKSELSKDFETVEIVPDIREIELFEWQGQLKEDIIKNNPEQYASWVADPSNFNFSGRYPARDLWERAGNAWDQIRSLQSIQDQPRTLVVAHNAINQALLWTALGCDTTYFRKLSWPNCAV 974
PFP + V L+RHGQ+ +NA GRIQG+ + S+LT++G +QA E + + D+ SP+ R+++T E + RK E+ D D+REI+L+ +QG LK + + E Y W DP+NF G YP R LWERA N WD+I + D LVVAHNA+NQAL+ TA+G T YFR L NC V
Sbjct: 41 PFPAVKSAKRV--VLVRHGQSTWNAEGRIQGSSNFSVLTQKGEAQA-ETSRQMLVDDSFDI---CFASPLNRSKRTAEIIWG-TRKEEILTDL-------DLREIDLYSFQGLLKHEGKEKFGEAYQEWQKDPANFCIDGNYPVRQLWERARNCWDKIL----LHDSRSVLVVAHNAVNQALIATAMGLGTEYFRVLLQSNCGV 226 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1503.3565.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1503.3565.1 >prot_E-fasciculatus_F_contig1503.3565.1 ID=prot_E-fasciculatus_F_contig1503.3565.1|Name=mRNA_E-fasciculatus_F_contig1503.3565.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=323bp MRRPGRPRPAPGGFLLALATARKSFTRAFCFGGGSSGGNVGKRLFRGTAAback to top mRNA from alignment at E-fasciculatus_F_contig1503:6847..11004- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1503.3565.1 ID=mRNA_E-fasciculatus_F_contig1503.3565.1|Name=mRNA_E-fasciculatus_F_contig1503.3565.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=4158bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1503:6847..11004- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1503:6847..11004- >mRNA_E-fasciculatus_F_contig1503.3565.1 ID=mRNA_E-fasciculatus_F_contig1503.3565.1|Name=mRNA_E-fasciculatus_F_contig1503.3565.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1938bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1503:6847..11004- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |