mRNA_E-fasciculatus_F_contig15015.3558.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig15015.3558.1 vs. uniprot
Match: A0A6H5JFK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFK1_9PHAE) HSP 1 Score: 157 bits (396), Expect = 2.520e-43 Identity = 74/78 (94.87%), Postives = 76/78 (97.44%), Query Frame = 2
Query: 212 DIAEALSPLVDFAKDILKDYEEDWERFPIYLKATAGVRQLSYSDREALLSAVRDFLGNPETCPFYFQFDHARVISGEE 445
D+AEALSPLVDFAK+ILKDYEEDWERFPIYLKATAGVRQL Y DREALLSAVRDFLGNPETCPFYFQFDHARVISGEE
Sbjct: 4 DVAEALSPLVDFAKEILKDYEEDWERFPIYLKATAGVRQLPYGDREALLSAVRDFLGNPETCPFYFQFDHARVISGEE 81
BLAST of mRNA_E-fasciculatus_F_contig15015.3558.1 vs. uniprot
Match: D7FI36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI36_ECTSI) HSP 1 Score: 159 bits (401), Expect = 6.790e-43 Identity = 76/78 (97.44%), Postives = 76/78 (97.44%), Query Frame = 2
Query: 212 DIAEALSPLVDFAKDILKDYEEDWERFPIYLKATAGVRQLSYSDREALLSAVRDFLGNPETCPFYFQFDHARVISGEE 445
DIAEALSPLVDFAKDILKDYEEDWERFPIYLKATAGVRQL Y DREALLSAVRDFLGNPETCPFYFQFDHARVISGEE
Sbjct: 90 DIAEALSPLVDFAKDILKDYEEDWERFPIYLKATAGVRQLPYGDREALLSAVRDFLGNPETCPFYFQFDHARVISGEE 167
BLAST of mRNA_E-fasciculatus_F_contig15015.3558.1 vs. uniprot
Match: A0A6H5JI00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI00_9PHAE) HSP 1 Score: 108 bits (270), Expect = 5.120e-28 Identity = 49/56 (87.50%), Postives = 51/56 (91.07%), Query Frame = 1
Query: 1 IIDAGSSGSRMHVYQWEPRIFTTLPPPISIPGSTNQWTQRMRPGISSYSNHLEAGG 168
IIDAGSSGSRMHVYQWEPR+F TLPPPISIPGSTNQWT RM PGISSYS HL+A G
Sbjct: 44 IIDAGSSGSRMHVYQWEPRMFATLPPPISIPGSTNQWTHRMEPGISSYSTHLQAWG 99
BLAST of mRNA_E-fasciculatus_F_contig15015.3558.1 vs. uniprot
Match: A0A835YPX1_9STRA (Nucleoside phosphatase GDA1/CD39 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPX1_9STRA) HSP 1 Score: 107 bits (268), Expect = 6.580e-26 Identity = 47/78 (60.26%), Postives = 65/78 (83.33%), Query Frame = 2
Query: 212 DIAEALSPLVDFAKDILKDYEEDWERFPIYLKATAGVRQLSYSDREALLSAVRDFLGNPETCPFYFQFDHARVISGEE 445
D+ ++L PLVDFAK ILKD+EEDW ++PIYL+ATAG+RQL + R A+L A+RD+LG PE CPF+F++ + RV++GEE
Sbjct: 98 DVGQSLKPLVDFAKTILKDHEEDWHKYPIYLRATAGMRQLEPTKRVAVLDAIRDYLGGPE-CPFHFEYHYVRVLAGEE 174
BLAST of mRNA_E-fasciculatus_F_contig15015.3558.1 vs. uniprot
Match: A0A835ZFV4_9STRA (Nucleoside phosphatase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFV4_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 5.850e-20 Identity = 44/78 (56.41%), Postives = 62/78 (79.49%), Query Frame = 2
Query: 212 DIAEALSPLVDFAKDILKDYEEDWERFPIYLKATAGVRQLSYSDREALLSAVRDFLGNPETCPFYFQFDHARVISGEE 445
DI E L PL+DFA DIL D + D+ +FPI+LKAT G+RQL ++ R+A+++A+R +L + CPFYF+F++ARVISGEE
Sbjct: 55 DIGEHLGPLIDFAIDILADKKGDFWKFPIFLKATGGMRQLPFAQRDAIMTAIRQYLYGDD-CPFYFEFEYARVISGEE 131
BLAST of mRNA_E-fasciculatus_F_contig15015.3558.1 vs. uniprot
Match: A0A7S1TZX0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZX0_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.710e-19 Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 2
Query: 179 LFLLSSEPESLDIAEALSPLVDFAKDILKDYEEDWERFPIYLKATAGVRQLSYSDREALLSAVRDFLGNPETCPFYFQFDHARVISGEE 445
L L +P++ + EAL PLV+FAK++LKD + W +PIYLKAT G+R+L + RE ++ VR +L + TCPFYF+ D ARVISGEE
Sbjct: 96 LSTLGLDPDA--VGEALFPLVEFAKNVLKDKADRWHNYPIYLKATGGMRELPNNLREQVMGWVRAYLEDNSTCPFYFRRDFARVISGEE 182
BLAST of mRNA_E-fasciculatus_F_contig15015.3558.1 vs. uniprot
Match: A0A7S1XQJ9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQJ9_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 4.000e-19 Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 2
Query: 179 LFLLSSEPESLDIAEALSPLVDFAKDILKDYEEDWERFPIYLKATAGVRQLSYSDREALLSAVRDFLGNPETCPFYFQFDHARVISGEE 445
L L +P++ + EAL PLV+FAK++LKD + W +PIYLKAT G+R+L + RE ++ VR +L + TCPFYF+ D ARVISGEE
Sbjct: 96 LSTLGLDPDA--VGEALFPLVEFAKNVLKDKADRWHNYPIYLKATGGMRELPNNLREQVMGWVRAYLEDNSTCPFYFRRDFARVISGEE 182
BLAST of mRNA_E-fasciculatus_F_contig15015.3558.1 vs. uniprot
Match: A0A835YH63_9STRA (Nucleoside phosphatase family-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH63_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.020e-18 Identity = 41/78 (52.56%), Postives = 61/78 (78.21%), Query Frame = 2
Query: 212 DIAEALSPLVDFAKDILKDYEEDWERFPIYLKATAGVRQLSYSDREALLSAVRDFLGNPETCPFYFQFDHARVISGEE 445
DI E L PL++FAK+ILKD+E+++ +FP+YL+AT G+RQL + R ++ +R FL + E+ PFYF++D ARV+SGEE
Sbjct: 58 DIGEHLRPLIEFAKNILKDHEDNFYKFPLYLRATGGMRQLPVAQRARIMDHIRWFLYSEES-PFYFEYDFARVVSGEE 134
BLAST of mRNA_E-fasciculatus_F_contig15015.3558.1 vs. uniprot
Match: W7TQ28_9STRA (Ectonucleoside triphosphate diphosphohydrolase 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQ28_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.220e-17 Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 2
Query: 215 IAEALSPLVDFAKDILKDYEEDWERFPIYLKATAGVRQLSYSDREALLSAVRDFLGNPETCPFYFQFDHARVISGEE 445
+ +L L+ FA+++L E ++ FPIYLKAT G+RQLS S REA++ VR ++ N TCPFYF+ D ARV+SGEE
Sbjct: 180 VGTSLDSLISFAREVLAGKEHQFKYFPIYLKATGGMRQLSPSKREAIIDEVRKYMMNKTTCPFYFEHDFARVVSGEE 256
BLAST of mRNA_E-fasciculatus_F_contig15015.3558.1 vs. uniprot
Match: A0A1E7F677_9STRA (GDA1_CD39-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F677_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 7.830e-17 Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 2
Query: 179 LFLLSSEPESLD--IAEALSPLVDFAKDILKDYEEDWERFPIYLKATAGVRQLSYSDREALLSAVRDFLGNPETCPFYFQFDHARVISGEE 445
+F PE L+ + E L L+DFAK++LKD E++W +PIYLKAT G+R L+ +R L+ VRD N PF F+ + ARVISGEE
Sbjct: 161 VFGYHKNPEKLEKAVGEYLGALLDFAKEVLKDKEDEWHTYPIYLKATGGLRTLAQPERVRLMDCVRDLFNNKTYNPFAFEDERARVISGEE 251 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig15015.3558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig15015.3558.1 >prot_E-fasciculatus_F_contig15015.3558.1 ID=prot_E-fasciculatus_F_contig15015.3558.1|Name=mRNA_E-fasciculatus_F_contig15015.3558.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=47bp MHVYQWEPRIFTTLPPPISIPGSTNQWTQRMRPGISSYSNHLEAGG*back to top mRNA from alignment at E-fasciculatus_F_contig15015:193..1069- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig15015.3558.1 ID=mRNA_E-fasciculatus_F_contig15015.3558.1|Name=mRNA_E-fasciculatus_F_contig15015.3558.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=877bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15015:193..1069- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig15015:193..1069- >mRNA_E-fasciculatus_F_contig15015.3558.1 ID=mRNA_E-fasciculatus_F_contig15015.3558.1|Name=mRNA_E-fasciculatus_F_contig15015.3558.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=282bp|location=Sequence derived from alignment at E-fasciculatus_F_contig15015:193..1069- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |