mRNA_E-fasciculatus_F_contig1499.3536.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig1499.3536.1 vs. uniprot
Match: D7FNG9_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG9_ECTSI) HSP 1 Score: 502 bits (1293), Expect = 2.870e-174 Identity = 272/311 (87.46%), Postives = 277/311 (89.07%), Query Frame = 1
Query: 43 MTSLDFQSLLKQEKALQRAQLAQSTRTXXXXXXXXXXXESGPARSRLSTTCRRRVEERKAVGTKEPSQLFVKLAGRPSLDMEKMRVGNTPSIFYVPDFISGADEQQLLERIHAEASGNEWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSEKTRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRVETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCSGSAGDGVDERGDGG--GGAPVINGAAAGAPEGTILRRKLRVSLTFRRVR 969
MTSLDFQSLLKQEKALQR QLAQSTRT XXXXXXX E K VGTKEPS L VKLAGRPSLDMEKMRVGNTPSIFYVPDFISGADEQQLLERIHA+AS NEWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSE+TRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPR+ETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGC GS+GD V +RG GG GGAPVINGAAAGAPEGTILRRKLRVSLTFRRVR
Sbjct: 1 MTSLDFQSLLKQEKALQRVQLAQSTRTTAVQXXXXXXXXXXXXXXXXXXXX---XXESKVVGTKEPSPLLVKLAGRPSLDMEKMRVGNTPSIFYVPDFISGADEQQLLERIHAQASSNEWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSEETRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRIETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCGGSSGD-VGKRGGGGVGGGAPVINGAAAGAPEGTILRRKLRVSLTFRRVR 307
BLAST of mRNA_E-fasciculatus_F_contig1499.3536.1 vs. uniprot
Match: A0A835ZDT2_9STRA (Fe2OG dioxygenase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT2_9STRA) HSP 1 Score: 201 bits (510), Expect = 1.260e-57 Identity = 112/239 (46.86%), Postives = 145/239 (60.67%), Query Frame = 1
Query: 271 PSLDMEKMRVGNTPSIFYVPDFISGADEQQLLERIHAEASGN-EWVTLRSRRLKCWGGQ---PGESFRPEPLPPWVDALCESLVVRGVFSEKTRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRVET-SRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCSGSAGDGVDERGDGGGGA-PVINGAAAG-APEGTILRRKLRVSLTFRRV 966
P++D++ R G PS++Y PDF++ + +++++++A G+ W LR+RRL+CWGGQ G + P L PW+ LC LV G+F PNHVL+NEYQPGQGIM HTDGP Y PRTATLSL SDAV + R + IG V+ P +L+LR SLVVFAD AY+ H ID V EE VG DG GG V+NG AG A E ++ R LR+SLTFR V
Sbjct: 6 PTVDLQSHRTGTIPSVYYNPDFVTASLADEIIKQVYAVPEGHARWTVLRTRRLQCWGGQLQADGRAHDPSDLCPWLQQLCTLLVTCGIFPAHAPPNHVLINEYQPGQGIMPHTDGPMYYPRTATLSLMSDAVFKLAQRPRSPGDIG--SVDLSPTEALLLRNRSLVVFADAAYTDFTHGIDFVHEEAVG-------------DGSGGTCSVVNGPEAGVAEEEVVVERALRISLTFRHV 229
BLAST of mRNA_E-fasciculatus_F_contig1499.3536.1 vs. uniprot
Match: A0A4D9DGD1_9STRA (Fe2OG dioxygenase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DGD1_9STRA) HSP 1 Score: 188 bits (477), Expect = 1.950e-51 Identity = 109/243 (44.86%), Postives = 143/243 (58.85%), Query Frame = 1
Query: 280 DMEKMRVGNTPS-IFYVPDFISGADEQQLLERIHAEASGNEWVTLRSRRLKCWGGQPGE---SFRPEPLPPWVDALCESLVVRGVFSEKTRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRVETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCSGSAGDGVDERGDGGGGAPVINGAAAGAPEGTI-----LRRKLRVSLTFRRVRVERE 981
D+ K + P +FYVP++IS EQ+++E H+ N+WV LR RRL+C+GG+P E SF+ E LPPW+ +C +L++ GVF E+ PNHVLLNEY+PGQGIMAH DGPFY R A +SLG A+ F R+ I E+ P ++VL SL+VF +AY LH I AV EE VG G+ G PV+N EG I L+R LR+SLT RRV+ E E
Sbjct: 121 DLSKHAMRGPPDGVFYVPEYISKEMEQEIMEVAHSMPV-NQWVKLRGRRLQCFGGKPTENVRSFQSEALPPWIGQVCRTLMLAGVFDEEIIPNHVLLNEYEPGQGIMAHADGPFYHSRVAIISLGGPAIFRFKRRLIAEEISADSQESGPAGTVVLEPRSLIVFEGEAYHDYLHEIAAVEEEVVG--GTEGT-----------TPVLN---LERLEGRINVGDRLKRALRLSLTCRRVKEEGE 346
BLAST of mRNA_E-fasciculatus_F_contig1499.3536.1 vs. uniprot
Match: A0A7S2G6U9_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G6U9_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.060e-50 Identity = 106/246 (43.09%), Postives = 147/246 (59.76%), Query Frame = 1
Query: 250 FVKLAGRPSLDMEKMRVGNT-PSIFYVPDFISGADEQQLLERIHAEASGN-EWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSEKTRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRVETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCSGSAGDGVDERGDGGGGAPVINGAAAGAPEGTILRRK-LRVSLTFRRVRVER 978
F + RP + + V + ++ Y+P++++ +E ++ + +A + WVTLR RRL+CWGG+P EPLPPW+ L E LV G+F + PNHVLLNEY+ G+GIMAHTDG FY P+TATLSLG AVM F+PRV+ +G V+ RP A +VLR SLVVF ++AY LH+I A + VG + APV N +AGA G ++ R +R+SLTFR + ER
Sbjct: 79 FDRWTSRPRVKLTDYDVDSKLKTVSYLPEWVAEDEEAAIMAQTYAVPDSHPSWVTLRGRRLQCWGGEPRRDSAAEPLPPWLQRLSEGLVEAGIFPAEVAPNHVLLNEYKAGEGIMAHTDGDFYHPQTATLSLGGTAVMTFAPRVQPRAVGL--VDGRPVAEVVLRPRSLVVFREEAYLDHLHAIAASHSDEVGAA----------------APVANLESAGARLGEVIARPAVRLSLTFRHIVRER 306
BLAST of mRNA_E-fasciculatus_F_contig1499.3536.1 vs. uniprot
Match: A0A7S2G3H8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G3H8_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.060e-45 Identity = 89/192 (46.35%), Postives = 118/192 (61.46%), Query Frame = 1
Query: 400 WVTLRSRRLKCWGGQPGE--SFRPEPLPPWVDALCESLVVRGVFSEKTRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRVETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCSGSAGDGVDERGDGGGGAPVINGAAAGAPEGTILRRK-LRVSLTFRRV 966
W++L RR++CWGGQP E F PEPLPPW+ +C +LV GVF + RPNHVL+NEY G+GI+ H+DGP Y P+TATLSLG A+M F PR+ + IG V + P ++LR SLVVF D AY +H+I + + + VG A IN A +GA G +++R +RVSLTFR V
Sbjct: 16 WISLSGRRVQCWGGQPNERTKFVPEPLPPWLVDICTALVDAGVFPSEVRPNHVLINEYANGEGILPHSDGPMYFPKTATLSLGGSAIMTFEPRISSGDIGE--VSSDPICEVILRPRSLVVFEDAAYIDYMHAIASRQTDQVGSR----------------AVPINLALSGARHGEMVQRPAIRVSLTFRHV 189
BLAST of mRNA_E-fasciculatus_F_contig1499.3536.1 vs. uniprot
Match: A0A7S0PB53_CAFRO (Hypothetical protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PB53_CAFRO) HSP 1 Score: 160 bits (404), Expect = 2.710e-41 Identity = 105/241 (43.57%), Postives = 131/241 (54.36%), Query Frame = 1
Query: 274 SLDMEKMRVGNTPSIFYVPDFISGADEQQLLERIHA---EASGNEWVTLRSRRLKCWGGQPGESFR---PEPLPPWVDALCESLVVRGVFSEKTRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRVETSRIGRPG---VETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCSGSAGDGVDERGDGGGGAPVINGAAAGAPEGTIL-RRKLRVSLTFRRV 966
S M+K+ V N +F+S A E LL + + EASG WV LR RRL +GG P R EPLPPW+ A+ + LV G F E RPNHVL+N Y PG+GI+ HTDGP Y P TATLSLGSDAVM F+PRV + +G +E L SLVVF+D+AY+ LH + AV E V A +N A+ G EG+++ R LRVSLT R V
Sbjct: 92 SAPMQKVVVHN--------EFLSAACEADLLRCVLSPVYEASGR-WVRLRGRRLLQFGGTPMPGPRLLGREPLPPWLGAVVDRLVATGAFPEDKRPNHVLVNAYGPGEGILPHTDGPLYFPCTATLSLGSDAVMRFAPRVPSELVGTSSQSHLEAAKSFDAGLARRSLVVFSDEAYTSALHDVAAVGEHRVT------------------AKCLNAASLGWAEGSLIPRAPLRVSLTMRHV 305
BLAST of mRNA_E-fasciculatus_F_contig1499.3536.1 vs. uniprot
Match: UPI001C9126C5 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6-like isoform X1 n=2 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C9126C5) HSP 1 Score: 157 bits (396), Expect = 2.850e-41 Identity = 98/231 (42.42%), Postives = 130/231 (56.28%), Query Frame = 1
Query: 283 MEKMRVGNTPS-IFYVPDFISGADEQQLLERIHAEASGNEWVTLRSRRLKCWGGQPG-ESFRPEPLPPWVDALCESLVVRGVFSEKTRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMH-FSPRVETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCSGSAGDGVDERGDGGGGAPVINGAAAGAPEGTILRRKLRVSLTFRRV 966
+EK +V P+ + YVP+F++ A+EQ+LLE ++A A W L RRL+ WGG P PE +P W+ A E + G F E RPNHVL+NEY PGQGIM HTDGP + P T++LGS A++ + PR + S+ P E SL+L SL+V DDAY LLH I A E+TV + V+NGA A G+ L+R+ RVSLT R V
Sbjct: 4 LEKYKVTRAPATVHYVPEFVTEAEEQRLLELVYA-APRPRWTQLAHRRLQNWGGLPHPRGMLPEQIPTWLQAPMERIAALGCFGE-LRPNHVLVNEYLPGQGIMPHTDGPLFAPVITTVTLGSHALLDLYRPRQDDSQEASPA-EPEAVGSLLLARRSLLVVRDDAYHHLLHGIAARTEDTVTDA------------------VLNGAEQAA--GSRLQRQTRVSLTIRHV 211
BLAST of mRNA_E-fasciculatus_F_contig1499.3536.1 vs. uniprot
Match: A0A2R5GWX9_9STRA (Alpha-ketoglutarate-dependent dioxygenase alkB-like 6 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWX9_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.200e-40 Identity = 90/215 (41.86%), Postives = 120/215 (55.81%), Query Frame = 1
Query: 316 IFYVPDFISGADEQQLLERIHAEASGNEWVTLRSRRLKCWGGQPGESFRPEPLPPWVDALCESLVVRGVFSEKTRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRVETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCSGSAGDGVDERGDGGGGAPVINGAAAGAPEGTILRRKLRVSLTFR 960
++Y+P+F + + +LE+ +++A+ W +RSRRL+C +R +PPW+D L SLV G+FS RPNH LLNEY+PGQGI+ HTDGP Y A +SLGS A F+ R+ T IG E R A+L+L+ SLVVFA DAY LHS+ A+ EE V A V N AA A G + R RVS+T R
Sbjct: 92 VWYIPNFCTVEEHDDMLEQTYSKAAS--WKDIRSRRLQC--------YREPEMPPWLDTLASSLVQAGIFSPAQRPNHALLNEYEPGQGILGHTDGPVYHSLVACISLGSPATFRFTERLLTDEIGVR--EARELATLLLQPRSLVVFAADAYREALHSVPALLEEVVS------------------ADVANIEAAQASVGDRIPRTTRVSITMR 276
BLAST of mRNA_E-fasciculatus_F_contig1499.3536.1 vs. uniprot
Match: UPI00165B441C (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165B441C) HSP 1 Score: 154 bits (388), Expect = 5.910e-40 Identity = 97/236 (41.10%), Postives = 128/236 (54.24%), Query Frame = 1
Query: 280 DMEKMRVGNTP-SIFYVPDFISGADEQQLLERIHAEASGNEWVTLRSRRLKCWGGQPG-ESFRPEPLPPWVDALCESLVVRGVFSEKTRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHF-----SPRVETSRIGRPGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCSGSAGDGVDERGDGGGGAPVINGAAAGAPEGTILRRKLRVSLTFRRV 966
D+++ V P +++YVPDFIS +E LL++++ A +W L RRL+ WGG P E LP W+ CE + G F KT NHVL+NEY+ G+GIM H DGP Y P T+SLGS A++ F P E ++ VE+R Q SL++R SL+V DDAY RLLH I +++T+ ER V N AAGA G L R RVSLT R V
Sbjct: 10 DLQRFVVSEAPQTVYYVPDFISPEEESYLLQQVY-RAPRTKWTQLSGRRLQNWGGVPHPRGMLGEELPAWLQNYCEKISSLGAFGGKTA-NHVLVNEYKRGEGIMPHQDGPLYHPTVTTVSLGSHALLDFYRPVGGPDGEAAQ----SVESRYQFSLLVRPRSLLVLQDDAYRRLLHGIQERQQDTL----------TER--------VANLGAAGARPGDTLSRTTRVSLTIRHV 221
BLAST of mRNA_E-fasciculatus_F_contig1499.3536.1 vs. uniprot
Match: A0A1S3LNM3_SALSA (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 n=20 Tax=Salmonidae TaxID=8015 RepID=A0A1S3LNM3_SALSA) HSP 1 Score: 150 bits (378), Expect = 1.670e-38 Identity = 90/233 (38.63%), Postives = 125/233 (53.65%), Query Frame = 1
Query: 280 DMEKMRVGNTP-SIFYVPDFISGADEQQLLERIHAEASGNEWVTLRSRRLKCWGGQPG-ESFRPEPLPPWVDALCESLVVRGVFSEKTRPNHVLLNEYQPGQGIMAHTDGPFYEPRTATLSLGSDAVMHFSPRVETSRIGR--PGVETRPQASLVLRALSLVVFADDAYSRLLHSIDAVREETVGCSGSAGDGVDERGDGGGGAPVINGAAAGAPEGTILRRKLRVSLTFRRV 966
D+E+ V + P +++Y+PDFI+ +E QLL++++ +A +W L +RRL+ WGG P + E LP W+ CE + G F+ KT NHVL+NEY+PG+GIM H DGP Y P T+SLGS ++ F + + E+R SL++R SL++ DD Y RLLH I D + ER V N AAG G L R RVSLT R V
Sbjct: 10 DLERYVVKDAPPTVYYIPDFITEDEESQLLQQVY-KAPKTKWTQLSNRRLQNWGGLPRPKGMLGEKLPDWLLKYCERISALGAFAGKTA-NHVLVNEYKPGEGIMPHEDGPLYHPTVTTISLGSHTLLDFYRPISAQELDEVPQTEESRYLLSLLVRPRSLLILQDDMYQRLLHGIQGTHH----------DSLTER--------VANLLAAGVQPGATLTRGTRVSLTVRHV 222 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1499.3536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig1499.3536.1 >prot_E-fasciculatus_F_contig1499.3536.1 ID=prot_E-fasciculatus_F_contig1499.3536.1|Name=mRNA_E-fasciculatus_F_contig1499.3536.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=315bp MTSLDFQSLLKQEKALQRAQLAQSTRTTTTAVVVQQEDESGPARSRLSTTback to top mRNA from alignment at E-fasciculatus_F_contig1499:14233..17147+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig1499.3536.1 ID=mRNA_E-fasciculatus_F_contig1499.3536.1|Name=mRNA_E-fasciculatus_F_contig1499.3536.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2915bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1499:14233..17147+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig1499:14233..17147+ >mRNA_E-fasciculatus_F_contig1499.3536.1 ID=mRNA_E-fasciculatus_F_contig1499.3536.1|Name=mRNA_E-fasciculatus_F_contig1499.3536.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1890bp|location=Sequence derived from alignment at E-fasciculatus_F_contig1499:14233..17147+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |