prot_E-fasciculatus_F_contig1495.3513.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1495.3513.1
Unique Nameprot_E-fasciculatus_F_contig1495.3513.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length263
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1495.3513.1 vs. uniprot
Match: A0A6H5K4V2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4V2_9PHAE)

HSP 1 Score: 414 bits (1063), Expect = 2.380e-144
Identity = 226/262 (86.26%), Postives = 239/262 (91.22%), Query Frame = 0 
Query:    1 MENIRSTIEQGATVLQSYISSLQVRTDTKFSLLLGALLGLSVVAAMAAFPGKPIDYTGVGIDLPPEMRGEETEK-SKKVDGEGSAGAVDEQKPAGLQQIQGVVDNLSQLRRRKRAKDPSLSAAAGEESLVNTTTESQSKETGNAGDVAGKAEWDASRLDEDKLARKIGSSKAARMLGLTEDQVRQAVADAKQELEQSNSGSGGGSPGRDNNDDGVGFSGFLSLAMLLMGVGALWAHLSAYPHGTLSRFLIGVFPREMETLGL 261
            MENI S IE GATVLQSY+SSLQVRTDTKFSLLLG LLGLSVV A+A++PGKPIDYTGVGIDLPPEMRGEET   +KK+D  GS GAVDEQKPAGLQQIQGVVDNLSQLRRRKRAK+   SAAAGEESLVNTTTESQ KETGNA D AG+AEWDA RLDEDKLARKIGSSKAARMLGLTEDQVRQAVADAKQELEQS+SG  GGSP RD+NDDGVGFSGFLSLAMLL+G+ ALWAHLSAYPHGTL RFL+GVFPREMETLGL
Sbjct:    1 MENILSKIEDGATVLQSYVSSLQVRTDTKFSLLLGILLGLSVVVAIASYPGKPIDYTGVGIDLPPEMRGEETVGVAKKLDQAGSVGAVDEQKPAGLQQIQGVVDNLSQLRRRKRAKNTPSSAAAGEESLVNTTTESQIKETGNAEDEAGRAEWDARRLDEDKLARKIGSSKAARMLGLTEDQVRQAVADAKQELEQSSSGPAGGSPARDSNDDGVGFSGFLSLAMLLVGMWALWAHLSAYPHGTLCRFLVGVFPREMETLGL 262
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1495.3513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K4V2_9PHAE2.380e-14486.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 214..236
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 237..262
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..49
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 50..213
NoneNo IPR availableTMHMMTMhelixcoord: 30..49
NoneNo IPR availableTMHMMTMhelixcoord: 214..236

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1495contigE-fasciculatus_F_contig1495:6906..9296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1495.3513.1mRNA_E-fasciculatus_F_contig1495.3513.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1495 6824..9392 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1495.3513.1 ID=prot_E-fasciculatus_F_contig1495.3513.1|Name=mRNA_E-fasciculatus_F_contig1495.3513.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=263bp
MENIRSTIEQGATVLQSYISSLQVRTDTKFSLLLGALLGLSVVAAMAAFP
GKPIDYTGVGIDLPPEMRGEETEKSKKVDGEGSAGAVDEQKPAGLQQIQG
VVDNLSQLRRRKRAKDPSLSAAAGEESLVNTTTESQSKETGNAGDVAGKA
EWDASRLDEDKLARKIGSSKAARMLGLTEDQVRQAVADAKQELEQSNSGS
GGGSPGRDNNDDGVGFSGFLSLAMLLMGVGALWAHLSAYPHGTLSRFLIG
VFPREMETLGLG*
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