prot_E-fasciculatus_F_contig14912.3494.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig14912.3494.1
Unique Nameprot_E-fasciculatus_F_contig14912.3494.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length116
Homology
BLAST of mRNA_E-fasciculatus_F_contig14912.3494.1 vs. uniprot
Match: D7FJL2_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL2_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 1.450e-60
Identity = 103/105 (98.10%), Postives = 103/105 (98.10%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKASIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 105
            MLSRGIGVHHGGLLPILK  IVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK
Sbjct:  924 MLSRGIGVHHGGLLPILK-EIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 1027          
BLAST of mRNA_E-fasciculatus_F_contig14912.3494.1 vs. uniprot
Match: A0A6H5KP96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP96_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 4.260e-59
Identity = 101/106 (95.28%), Postives = 103/106 (97.17%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKAS--IVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNL 104
            MLSRG+GVHHGGLLPILKAS  IVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPL+ L
Sbjct:  788 MLSRGVGVHHGGLLPILKASSEIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLMML 893          
BLAST of mRNA_E-fasciculatus_F_contig14912.3494.1 vs. uniprot
Match: A0A835Z0M0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M0_9STRA)

HSP 1 Score: 178 bits (451), Expect = 8.350e-55
Identity = 87/100 (87.00%), Postives = 93/100 (93.00%), Query Frame = 0
Query:    7 GVHHGGLLPILKASIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLKA 106
            GVHHGGLLPILK + VEI FSRG+VKVLFATETFAMGVNMPARTVVFNG RKHDG++FRDLLPGEYTQMAGRAGRRGLDKVGTV+IT WSEPPPL  L+A
Sbjct:    1 GVHHGGLLPILKET-VEILFSRGIVKVLFATETFAMGVNMPARTVVFNGLRKHDGREFRDLLPGEYTQMAGRAGRRGLDKVGTVLITAWSEPPPLPALRA 99          
BLAST of mRNA_E-fasciculatus_F_contig14912.3494.1 vs. uniprot
Match: K8YWY6_NANGC (Antiviral helicase SKI2 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWY6_NANGC)

HSP 1 Score: 180 bits (457), Expect = 6.630e-51
Identity = 87/105 (82.86%), Postives = 92/105 (87.62%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKASIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 105
            +  RGIGVHHGGLLP+LK  IVEI FSRGL+K+LFATETFAMGVNMPARTVVFN  RKHDG+DFRDL PGEYTQMAGRAGRRGLDKVGTVIITCW E PPL  L 
Sbjct:   28 LCKRGIGVHHGGLLPLLK-EIVEILFSRGLIKILFATETFAMGVNMPARTVVFNALRKHDGRDFRDLYPGEYTQMAGRAGRRGLDKVGTVIITCWKEVPPLPTLS 131          
BLAST of mRNA_E-fasciculatus_F_contig14912.3494.1 vs. uniprot
Match: A0A4D9CSQ0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSQ0_9STRA)

HSP 1 Score: 180 bits (457), Expect = 2.250e-50
Identity = 87/105 (82.86%), Postives = 92/105 (87.62%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKASIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 105
            +  RGIGVHHGGLLP+LK  IVEI FSRGL+K+LFATETFAMGVNMPARTVVFN  RKHDG+DFRDL PGEYTQMAGRAGRRGLDKVGTVIITCW E PPL  L 
Sbjct:  286 LCKRGIGVHHGGLLPLLK-EIVEILFSRGLIKILFATETFAMGVNMPARTVVFNALRKHDGRDFRDLYPGEYTQMAGRAGRRGLDKVGTVIITCWKEVPPLPTLS 389          
BLAST of mRNA_E-fasciculatus_F_contig14912.3494.1 vs. uniprot
Match: A0A812XZQ5_SYMMI (SKI2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XZQ5_SYMMI)

HSP 1 Score: 166 bits (420), Expect = 1.050e-49
Identity = 82/105 (78.10%), Postives = 90/105 (85.71%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKASIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 105
            +L RG GVHHGGLLP+LK   VEI FS+ +VKVL ATETFAMGVNMPAR+VVFNG RKHDGK FRDLLPGEYTQMAGRAGRRG DKVGTVII  W+E PP V+L+
Sbjct:   40 LLLRGFGVHHGGLLPVLK-ECVEILFSKSVVKVLLATETFAMGVNMPARSVVFNGYRKHDGKGFRDLLPGEYTQMAGRAGRRGKDKVGTVIIAAWNELPPEVSLR 143          
BLAST of mRNA_E-fasciculatus_F_contig14912.3494.1 vs. uniprot
Match: H3GLZ7_PHYRM (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=H3GLZ7_PHYRM)

HSP 1 Score: 177 bits (450), Expect = 2.180e-49
Identity = 86/105 (81.90%), Postives = 94/105 (89.52%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKASIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 105
            ML RGIGVHHGGLLPI+K  +VEI F RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK+FRDLLPGEYTQMAGRAGRRGLD VGTVII CW++ P   +L+
Sbjct:  667 MLKRGIGVHHGGLLPIIK-EMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKNFRDLLPGEYTQMAGRAGRRGLDSVGTVIIACWNDVPEPTSLR 770          
BLAST of mRNA_E-fasciculatus_F_contig14912.3494.1 vs. uniprot
Match: A0A067CLG9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CLG9_SAPPC)

HSP 1 Score: 177 bits (449), Expect = 2.970e-49
Identity = 87/105 (82.86%), Postives = 93/105 (88.57%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKASIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 105
            ML RGIGVHHGGLLPILK  +VEI F+RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK FRDLLPGEYTQMAGRAGRRGLD VGTVII CW + P   +L+
Sbjct:  672 MLLRGIGVHHGGLLPILK-EMVEILFARGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKAFRDLLPGEYTQMAGRAGRRGLDTVGTVIIACWGDAPDATSLR 775          
BLAST of mRNA_E-fasciculatus_F_contig14912.3494.1 vs. uniprot
Match: A0A397D844_9STRA (Helicase C-terminal domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397D844_9STRA)

HSP 1 Score: 172 bits (437), Expect = 3.310e-49
Identity = 85/105 (80.95%), Postives = 90/105 (85.71%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKASIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 105
            ML RGIGVHHGGLLPILK  +VEI F RGLVKVLF+TETFAMGVNMPARTVVFNG RKHDGK FRDLLPGEYTQMAGRAGRRGLD +GTVII CW E     +L+
Sbjct:  113 MLLRGIGVHHGGLLPILK-EMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGIRKHDGKSFRDLLPGEYTQMAGRAGRRGLDAIGTVIIACWGEVSDTTSLR 216          
BLAST of mRNA_E-fasciculatus_F_contig14912.3494.1 vs. uniprot
Match: A0A485LFX7_9STRA (Aste57867_20819 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LFX7_9STRA)

HSP 1 Score: 177 bits (448), Expect = 4.050e-49
Identity = 87/105 (82.86%), Postives = 91/105 (86.67%), Query Frame = 0
Query:    1 MLSRGIGVHHGGLLPILKASIVEICFSRGLVKVLFATETFAMGVNMPARTVVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPPLVNLK 105
            ML RGIGVHHGGLLPILK  +VEI F RGLVKVLF+TETFAMGVNMPARTVVFNGTRKHDGK FRDLLPGEYTQMAGRAGRRGLD +GTVII CW E P    L+
Sbjct:  712 MLLRGIGVHHGGLLPILK-EMVEILFGRGLVKVLFSTETFAMGVNMPARTVVFNGTRKHDGKTFRDLLPGEYTQMAGRAGRRGLDAIGTVIIACWGEVPDSTGLR 815          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14912.3494.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJL2_ECTSI1.450e-6098.10DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KP96_9PHAE4.260e-5995.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z0M0_9STRA8.350e-5587.00P-loop containing nucleoside triphosphate hydrolas... [more]
K8YWY6_NANGC6.630e-5182.86Antiviral helicase SKI2 (Fragment) n=1 Tax=Nannoch... [more]
A0A4D9CSQ0_9STRA2.250e-5082.86Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A812XZQ5_SYMMI1.050e-4978.10SKI2 protein (Fragment) n=1 Tax=Symbiodinium micro... [more]
H3GLZ7_PHYRM2.180e-4981.90Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A067CLG9_SAPPC2.970e-4982.86Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A397D844_9STRA3.310e-4980.95Helicase C-terminal domain-containing protein (Fra... [more]
A0A485LFX7_9STRA4.050e-4982.86Aste57867_20819 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 1..83
e-value: 3.4E-8
score: 43.2
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 10..83
e-value: 1.1E-6
score: 28.9
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..115
score: 8.771
NoneNo IPR availableGENE3D3.40.50.300coord: 1..107
e-value: 7.9E-48
score: 164.9
NoneNo IPR availablePANTHERPTHR12131:SF8HELICASE SKI2Wcoord: 1..99
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 1..99
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14912contigE-fasciculatus_F_contig14912:1140..2587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14912.3494.1mRNA_E-fasciculatus_F_contig14912.3494.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig14912 698..2631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig14912.3494.1 ID=prot_E-fasciculatus_F_contig14912.3494.1|Name=mRNA_E-fasciculatus_F_contig14912.3494.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=116bp
MLSRGIGVHHGGLLPILKASIVEICFSRGLVKVLFATETFAMGVNMPART
VVFNGTRKHDGKDFRDLLPGEYTQMAGRAGRRGLDKVGTVIITCWSEPPP
LVNLKACTPYHLCVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001650Helicase_C