mRNA_E-fasciculatus_F_contig14879.3472.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-fasciculatus_F_contig14879.3472.1
Unique NamemRNA_E-fasciculatus_F_contig14879.3472.1
TypemRNA
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Homology
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: D7FYQ4_ECTSI (Acyl-CoA oxidase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ4_ECTSI)

HSP 1 Score: 491 bits (1264), Expect = 2.050e-171
Identity = 282/306 (92.16%), Postives = 286/306 (93.46%), Query Frame = 1
Query:    1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGQGTTGAG----AGREAMVGAAVELGRATRAHCQLHLLERCTAGVEQQREAXXXXXA--SGEELNTREVNVLSSLRDLFALSIVEE 900
            +AFRFGAVRTQGYDEREGASPGSERQVLDYPTQQR+LLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLV QSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTAR      HLLRSLAAARKGKRLSEAFSYLSPSSTQQ G ATT TTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGG+GT GAG    AGREAMVGAAVELGRATRAHCQLHL+ERC AGVEQQRE XXXXX   SGEELNTREVNVLSSLRDLFALSIVEE
Sbjct:   68 IAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTAR------HLLRSLAAARKGKRLSEAFSYLSPSSTQQ-GAATT-TTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGKGTAGAGGGAAAGREAMVGAAVELGRATRAHCQLHLVERCMAGVEQQREXXXXXXXXXSGEELNTREVNVLSSLRDLFALSIVEE 365          
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A6H5JQT9_9PHAE (ACOX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT9_9PHAE)

HSP 1 Score: 267 bits (682), Expect = 2.840e-85
Identity = 183/258 (70.93%), Postives = 186/258 (72.09%), Query Frame = 1
Query:  160 MKSAYHYYLDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGQGTTGAGAG----REAMVGAAVELGRATRAHCQLHLLERCTAGVEQQREAXXXXX-------ASGEELNTREVNVLSSLRDLFALSIVEE 900
            MKSA+HYYLDTQDAEALPDLHATSAGLKSLV Q                      G  D SS                           HLLRSLAAAR+GKRLSEAFSYLSPS TQQ G ATT TTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQR GQGT GAG G    REAMVGAAVELGRATRAHCQLHL+ERCTAGVEQQRE XXXXX       ASGEELNTREVNVLSSLRDLFALSIVEE
Sbjct:    1 MKSAFHYYLDTQDAEALPDLHATSAGLKSLVTQV---------------------GEKDGSS---------------------------HLLRSLAAAREGKRLSEAFSYLSPSPTQQ-GAATT-TTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQREGQGTAGAGGGAAAWREAMVGAAVELGRATRAHCQLHLVERCTAGVEQQREXXXXXXXXXXXXVASGEELNTREVNVLSSLRDLFALSIVEE 208          
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A836CMS5_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS5_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.610e-65
Identity = 158/301 (52.49%), Postives = 178/301 (59.14%), Query Frame = 1
Query:    1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEA-FSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGQGTTGAGA-GREAMVGAAVELGRATRAHCQLHLLERCTAGVEQQREAXXXXXASGEELNTREVNVLSSLRDLFALSIVE 897
            +A RF AVR QG+   EG +   ER VLDYPTQQR L PLLA+AYALHF G+ M+  Y  YL T D  ALP LHATSAGLK+LV Q+VADGIE ARK+CGGHGYS  SGLPD S+ YLAL TLEGTQQVLEPQ AR       LLR LAAAR+G     A   YL+       G A+               L  P  QLRLF+ RA  AVLA + AV       T AG    EA+   A E GRA RAHCQLHLL+   A V Q  +A          +N RE  VL  L  LFALS +E
Sbjct:  306 IAIRFSAVRRQGF-AGEGTATADERPVLDYPTQQRGLFPLLAYAYALHFTGERMRVDYEAYLHTLDQGALPALHATSAGLKALVTQTVADGIETARKLCGGHGYSHASGLPDASANYLALPTLEGTQQVLEPQMAR------FLLRGLAAARRGGGAPPAGCEYLASERQLLAGGASG----------AALDLLDPAVQLRLFQRRALVAVLALQVAVAE----LTAAGVDAAEALGRRAAEAGRAARAHCQLHLLQHFAAAV-QALQAQASAGPCAAVINEREAAVLRDLCSLFALSTIE 584          
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A7S2UUA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUA8_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.390e-47
Identity = 115/262 (43.89%), Postives = 155/262 (59.16%), Query Frame = 1
Query:    1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVL----AAEEAVQRGGQGTTGAGAGREAMVGAAVELGRATRAHCQLHLLERCT 774
            ++ R+   R QG+ E EG++  +E +VLDYPTQQ  L PLLA AYALHF GQ  K+ Y  YL T D   LP +HA+S+GLK+   Q V DGIEA RKMCGGHGYS   G+P+L   YLA+ TLEGTQQVLEPQT R      +L+R+L AAR    +++   ++     Q   ++ T       ++     L  P+ Q++LF  RA  A +    A  +A++RG + +  +  G        VELGRA++AHCQL LL   T
Sbjct:   58 ISVRYSVARKQGFKE-EGST--AEHKVLDYPTQQATLFPLLATAYALHFMGQKFKTQYTSYLQTFDMTVLPGIHASSSGLKAYSMQMVCDGIEACRKMCGGHGYSLACGIPELLGNYLAMCTLEGTQQVLEPQTGR------YLIRALQAARTSDNVNQEPIFVYDPELQHLKSSKTWDYVQCGAISKDCFLN-PKLQVQLFEVRAARAAMQAGGAVHQAIKRGEKSSWLSSCG--------VELGRASKAHCQLLLLREFT 301          
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A7S3XZT9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZT9_HETAK)

HSP 1 Score: 146 bits (368), Expect = 8.650e-40
Identity = 89/159 (55.97%), Postives = 106/159 (66.67%), Query Frame = 1
Query:   13 FGAVRTQGYDEREGASPGS------ERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEA--LPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGK 465
            +  VR QG+   +GA  G       ER VLDYPTQ+R LLPL+A A+ALHF G   + +Y  YL   + EA  LP LHA SAGLK+LV  ++  GIE  R+MCGGHGY+Q SGL +L +  LA  TLEGTQQVLEPQTAR      HLLR+ AAARKGK
Sbjct:    1 YSVVRAQGF-LGDGAGAGGKAAAAEERVVLDYPTQRRALLPLVAWAFALHFQGAAFRGSYERYLADPEGEAPALPGLHAASAGLKALVTGALHAGIETCRRMCGGHGYAQSSGLWELHNDTLAFVTLEGTQQVLEPQTAR------HLLRARAAARKGK 152          
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A4D9DB85_9STRA (Acyl-coenzyme A oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DB85_9STRA)

HSP 1 Score: 143 bits (361), Expect = 8.280e-35
Identity = 107/266 (40.23%), Postives = 136/266 (51.13%), Query Frame = 1
Query:    1 VAFRFGAVRTQGYDE----REGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLSP---SSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQ---RGGQGTTGAGAGREAMVGAAVELGRATRAHCQLHLLER 768
            VA R+ AVR QGY      +   S   E QVLDYPTQQ  L+PLLA ++AL   GQ M+  Y  YL   D   LP++HA S+GLK+L  + V+ G++  R+MCGGHGY   SGLP++ S Y A+ T EGT QVLEPQ AR     L L  +     KG     A +  +P   SS           T              P  Q+  +  R  A +L A E V+   RGG+G   A     +M+   V  GR +RAHCQL LL R
Sbjct:  318 VAIRYSAVRRQGYAPSPPGKLSQSAPLELQVLDYPTQQHALMPLLAWSFALQITGQFMRRRYKAYLRELDLSLLPEVHALSSGLKALTGEVVSQGVDVCRRMCGGHGYLLASGLPEVFSNYTAVQTFEGTAQVLEPQLAR---FILRLSMAPTERPKGSGRGAATAAKAPFALSSDFDYVPLAAGKTFVRCRAATPVAFLDPAFQIEAYEARVSALLLLAREEVEADLRGGEGGLAA-----SMMKNGVLFGRLSRAHCQLVLLRR 575          
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A2P6N7N5_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N7N5_9EUKA)

HSP 1 Score: 134 bits (336), Expect = 2.280e-31
Identity = 111/305 (36.39%), Postives = 156/305 (51.15%), Query Frame = 1
Query:    1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYL---DTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGQGTTGAGAGREAMVG---AAVELGRATRAHCQLHLLERCTAGVEQQREAXXXXXASGEELNTREVNVLSSLRDLFALSIVE 897
            +A R+  VR QG  + + A    E ++++Y +QQ  LLPLL+HA+A+HF G ++   Y   L   D  D   LP +HAT++GLK+ V    ADGIE ARK CGGHGYSQFSGLP L + Y+   T EG   VL  QTAR       L++SL AA  GK L+ + +YL       +G  +          + G  L  P+ QL+ F  RA   ++ A + ++      T   AG++  +      ++L RA RAH  + +L      VE          A+ +E N R   VL  L DLF L  +E
Sbjct:  317 IAIRYSCVREQGMVQPKQAG---ETKLMNYKSQQYRLLPLLSHAFAIHFTGFYILDMYKDLLRRLDGSDFSTLPVIHATTSGLKAYVTTVAADGIEEARKCCGGHGYSQFSGLPTLFADYVPSCTFEGDNWVLFQQTAR------FLIKSLKAAVAGKPLAASVAYLKGYRAVGEGQKS--------QAKSGQDLLIPQVQLKAFEHRATRLIMEAAQLLE------TDRKAGKQYEISWNAHMIDLIRAARAHTLVVILTAFIERVE----------ATTDEKNKR---VLKKLCDLFCLYNIE 585          
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A0L0DVV4_THETB (Acyl-coenzyme A oxidase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DVV4_THETB)

HSP 1 Score: 129 bits (323), Expect = 8.530e-30
Identity = 81/168 (48.21%), Postives = 97/168 (57.74%), Query Frame = 1
Query:    1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYY---LDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLS 495
            +A R+ AVR QG         G E  VLDY  QQ  LL LLA AYA HF G++M   Y      L+  D   LP++HATSAGLKS+     ADGIE AR+ CGGHG+SQFSGLP L + Y+   T EG   VL  QTAR      +L++S   A  GK LS   +YLS
Sbjct:  310 IAIRYSAVRRQGTTR---GRDGGEMVVLDYTMQQHRLLILLATAYAFHFTGEYMMELYRRLQADLEDNDLSVLPEVHATSAGLKSMTTTVTADGIEEARRACGGHGFSQFSGLPYLYTWYVPAVTYEGDNVVLALQTAR------YLIKSCRQAADGKPLSAGVAYLS 468          
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: L8GFT5_ACACA (Acyl-coenzyme A oxidase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GFT5_ACACA)

HSP 1 Score: 121 bits (303), Expect = 3.900e-27
Identity = 73/160 (45.62%), Postives = 97/160 (60.62%), Query Frame = 1
Query:    1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYL---DTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRL 471
            +A R+ AVR Q  D    A    E+QVLDY  QQ  LLPLLA AYA HF G++M++ Y   +    + D  ALP++HATSAGLK++     ADGIE  RK CGGHGYS+F+G+ D+   Y+   T EG   V+  QTAR      +L+++   A KG+ L
Sbjct:  285 IAVRYSAVRRQFSD----ADNEPEKQVLDYRMQQYRLLPLLATAYAFHFTGRYMRNIYDELMRNIQSDDVSALPEVHATSAGLKAVTTWMTADGIEECRKCCGGHGYSKFAGISDIYVNYVPACTYEGDNVVMCLQTAR------YLVKTARGAAKGEPL 434          
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A1Y1HUL2_KLENI (Acyl-coenzyme A oxidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HUL2_KLENI)

HSP 1 Score: 120 bits (302), Expect = 5.500e-27
Identity = 92/253 (36.36%), Postives = 124/253 (49.01%), Query Frame = 1
Query:    1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYLDTQ---DAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGQGTTGAGAGREAMVGAAVELGRATRAHCQ 750
            +A R+ AVR Q      G   G E Q+++Y TQQ  L PLLA AYA  F G+ M+  Y   +D     D   LP++HA++AGLK+L     ADGIE  RK+CGG+GY   SGLPDL   Y+   T EG   +L  Q AR      +L++  +    G++ S A  YL  +             S     +  A   RPE QL     RA   V+     +Q       GA    +A+  +AVE+ R +RAHCQ
Sbjct:  301 IATRYNAVRRQF-----GGKVGLETQIIEYKTQQHRLFPLLASAYAFTFTGKWMRKLYTEVIDQLNRGDVSGLPEVHASTAGLKALTTSFTADGIEECRKLCGGNGYLMASGLPDLYCAYVPACTYEGDNYILFLQVAR------YLMKVASQLANGEKPSGAAQYLGDAQ---------RLCSVQCPAKSAADFLRPEVQLEALSARAARLVIGNGMRIQ-------GAKNFEKAIADSAVEMVRMSRAHCQ 526          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYQ4_ECTSI2.050e-17192.16Acyl-CoA oxidase, partial n=1 Tax=Ectocarpus silic... [more]
A0A6H5JQT9_9PHAE2.840e-8570.93ACOX domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CMS5_9STRA1.610e-6552.49Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UUA8_9STRA1.390e-4743.89Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S3XZT9_HETAK8.650e-4055.97Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9DB85_9STRA8.280e-3540.23Acyl-coenzyme A oxidase n=2 Tax=Monodopsidaceae Ta... [more]
A0A2P6N7N5_9EUKA2.280e-3136.39Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
A0A0L0DVV4_THETB8.530e-3048.21Acyl-coenzyme A oxidase n=1 Tax=Thecamonas trahens... [more]
L8GFT5_ACACA3.900e-2745.63Acyl-coenzyme A oxidase n=1 Tax=Acanthamoeba caste... [more]
A0A1Y1HUL2_KLENI5.500e-2736.36Acyl-coenzyme A oxidase n=1 Tax=Klebsormidium nite... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig14879contigE-fasciculatus_F_contig14879:66..2886 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score127.5
Seed ortholog evalue1.1e-26
Seed eggNOG ortholog529818.AMSG_02419T0
Preferred nameACOX2
KEGG rclassRC00052,RC00076,RC01942
KEGG koko:K00232,ko:K10214
KEGG ReactionR01175,R01279,R03777,R03857,R03990,R04751,R04754,R07888,R07892,R07896,R07934,R07950,R08735,R08740
KEGG Pathwayko00071,ko00120,ko00592,ko01040,ko01100,ko01110,ko01212,ko03320,ko04024,ko04146,map00071,map00120,map00592,map01040,map01100,map01110,map01212,map03320,map04024,map04146
KEGG ModuleM00087,M00104,M00113
GOsGO:0000003,GO:0000038,GO:0000166,GO:0001676,GO:0003674,GO:0003824,GO:0003995,GO:0003997,GO:0005102,GO:0005488,GO:0005504,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005777,GO:0005778,GO:0005782,GO:0005829,GO:0005886,GO:0005911,GO:0006082,GO:0006091,GO:0006605,GO:0006625,GO:0006629,GO:0006631,GO:0006635,GO:0006690,GO:0006692,GO:0006693,GO:0006694,GO:0006699,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007031,GO:0007276,GO:0007283,GO:0008104,GO:0008150,GO:0008152,GO:0008202,GO:0008206,GO:0008289,GO:0008610,GO:0009056,GO:0009058,GO:0009062,GO:0009506,GO:0009605,GO:0009607,GO:0009611,GO:0009620,GO:0009694,GO:0009695,GO:0009987,GO:0010035,GO:0010038,GO:0010817,GO:0010941,GO:0010942,GO:0015031,GO:0015833,GO:0016020,GO:0016042,GO:0016043,GO:0016053,GO:0016054,GO:0016137,GO:0016138,GO:0016401,GO:0016402,GO:0016491,GO:0016559,GO:0016627,GO:0016634,GO:0016725,GO:0017144,GO:0019216,GO:0019222,GO:0019395,GO:0019748,GO:0019752,GO:0019904,GO:0019953,GO:0022414,GO:0030054,GO:0030165,GO:0030258,GO:0031090,GO:0031406,GO:0031903,GO:0031907,GO:0031974,GO:0031981,GO:0032501,GO:0032504,GO:0032787,GO:0033036,GO:0033293,GO:0033365,GO:0033539,GO:0033540,GO:0033559,GO:0033791,GO:0034440,GO:0034613,GO:0036094,GO:0036109,GO:0042221,GO:0042445,GO:0042446,GO:0042579,GO:0042592,GO:0042632,GO:0042802,GO:0042803,GO:0042810,GO:0042811,GO:0042886,GO:0043167,GO:0043168,GO:0043177,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043436,GO:0043574,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0044703,GO:0045184,GO:0046394,GO:0046395,GO:0046686,GO:0046907,GO:0046983,GO:0047485,GO:0048037,GO:0048232,GO:0048285,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048609,GO:0048878,GO:0050660,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051704,GO:0051707,GO:0055044,GO:0055088,GO:0055092,GO:0055114,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071949,GO:0072329,GO:0072330,GO:0072594,GO:0072662,GO:0072663,GO:0080090,GO:0080134,GO:0097159,GO:0098588,GO:0098805,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901568,GO:1901575,GO:1901576,GO:1901615,GO:1901617,GO:1901657,GO:1901659,GO:1902882,GO:1902884,GO:1904069,GO:1904070
EggNOG free text desc.acyl-CoA oxidase activity
EggNOG OGsCOG1960@1,KOG0136@2759
EC1.17.99.3,1.3.3.6
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size900
Cds size900
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig14879.3472.1prot_E-fasciculatus_F_contig14879.3472.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalepolypeptideE-fasciculatus_F_contig14879 66..2886 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927968.6154785-CDS-E-fasciculatus_F_contig14879:65..1431622927968.6154785-CDS-E-fasciculatus_F_contig14879:65..143Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14879 66..143 +
1695995771.6993072-CDS-E-fasciculatus_F_contig14879:65..1431695995771.6993072-CDS-E-fasciculatus_F_contig14879:65..143Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14879 66..143 +
1622927968.6263082-CDS-E-fasciculatus_F_contig14879:771..9511622927968.6263082-CDS-E-fasciculatus_F_contig14879:771..951Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14879 772..951 +
1695995771.718444-CDS-E-fasciculatus_F_contig14879:771..9511695995771.718444-CDS-E-fasciculatus_F_contig14879:771..951Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14879 772..951 +
1622927968.6400595-CDS-E-fasciculatus_F_contig14879:1461..16281622927968.6400595-CDS-E-fasciculatus_F_contig14879:1461..1628Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14879 1462..1628 +
1695995771.7293158-CDS-E-fasciculatus_F_contig14879:1461..16281695995771.7293158-CDS-E-fasciculatus_F_contig14879:1461..1628Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14879 1462..1628 +
1622927968.6533737-CDS-E-fasciculatus_F_contig14879:1898..22011622927968.6533737-CDS-E-fasciculatus_F_contig14879:1898..2201Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14879 1899..2201 +
1695995771.7413182-CDS-E-fasciculatus_F_contig14879:1898..22011695995771.7413182-CDS-E-fasciculatus_F_contig14879:1898..2201Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14879 1899..2201 +
1622927968.671435-CDS-E-fasciculatus_F_contig14879:2714..28861622927968.671435-CDS-E-fasciculatus_F_contig14879:2714..2886Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14879 2715..2886 +
1695995771.7522924-CDS-E-fasciculatus_F_contig14879:2714..28861695995771.7522924-CDS-E-fasciculatus_F_contig14879:2714..2886Ectocarpus fasciculatus Ec846f_Ec191_B4_f femaleCDSE-fasciculatus_F_contig14879 2715..2886 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-fasciculatus_F_contig14879.3472.1

>prot_E-fasciculatus_F_contig14879.3472.1 ID=prot_E-fasciculatus_F_contig14879.3472.1|Name=mRNA_E-fasciculatus_F_contig14879.3472.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=300bp
VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFA
GQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCG
GHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAA
ARKGKRLSEAFSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLR
LFRGRARAAVLAAEEAVQRGGQGTTGAGAGREAMVGAAVELGRATRAHCQ
LHLLERCTAGVEQQREAAAAAAASGEELNTREVNVLSSLRDLFALSIVEE
back to top

mRNA from alignment at E-fasciculatus_F_contig14879:66..2886+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-fasciculatus_F_contig14879.3472.1 ID=mRNA_E-fasciculatus_F_contig14879.3472.1|Name=mRNA_E-fasciculatus_F_contig14879.3472.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2821bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14879:66..2886+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCGCCTTTCGCTTCGGTGCCGTGAGGACACAGGGTTACGACGAGAGAGA GGGCGCGTCGCCGGGGTCGGAGAGGCAGGTAAAAACACGTACGGGCATGC GTGTTTTCTTTTTTGGCGATTGACCTGAGAATGGCTTTGTCTTTTGTCTG TTTTTCTCATTAGCATCGACCGCGCTAACCGGCTGACTAATGAAAAAGAC GTGGTTCACAATGCGGTCGAAAACACAAGATGCTTGTACCGGCCACGATC TGAGCTCCTGTAAGGGAGCATCATGGGGGAGTCTACGCTACGTTCCGGAT TTTAAGACAGATACCGTACAAGTAGCAATAACAGAAGAAAACTGTACGTG TTTACCGTGGCAGCTAACTACTTTGGACGCGCGTTCGTTTTGGTTTGCTT TCTTCGTCGCCTTCCCTGCGTTGTGTGTTTGTGTTAGGTTGTCCTTCGTA CGTGTGTGTCGTCGCGGCGCCTTTTTGTGGCATCGTCTCCAATGCCGTAT ATATGCTTGAGTTTCTGTCTATCTGTCTGTCTGTCTGTCTCTCCCTCTCT CTCTCGCAAGCTATCGCAAGCTATCTCTCTTCCCTCTCTGTCTACCACAA ACCCGAACACCCGTCGGTGTGTAATTTTTCTCGTGCTCTTGTGACGCCAC CGGCTGCCGTTCACCCGCCCATACGCAACGCGCCCGTGACGCCTCACCTT CACCAGGTGTTGGACTACCCCACTCAACAGCGGATCCTCTTGCCGCTCCT GGCTCACGCCTACGCGCTCCACTTCGCCGGACAGCACATGAAGTCCGCCT ACCACTACTACCTCGACACCCAAGACGCGGAAGCCCTTCCAGACTTGCAC GCCACAAGCGCTGGGCTTAAGTCTCTCGTAGCGCAGGTGGGAAAAAAAAT GGATGTGGTACCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNTCTCACG GCCCCGTTTGCCGCATCTCTGTGTCTCCGCCTACTGCTGTCCCTTCCTCT TGTCTCTTTGTTTCTGCGTTCTGCTACTGTCCCTTTCTCTGTCTTTGGTT CGCTCGGTGTCTAGTATCTGTGTCCTCCTTCAGCCCTCGCTTCCCCCCAC CGTACGACCGTATCCTCTACCGTCACGAGCATTCTATCCCCCTTCCCTTG CCCTGTCTTTTTGTCTCTCTGATCCCGTCTGTACTTCTCTGTTGGACAAT ATAAGCCCCGTTCGGCCACAAGCGCGAATGCCACAATGGTCCCTATATTT ACCAACAAGGTAACTTTTTGGATTGCCTATCTAAAGCCACACCCACACCC CGTCGCCTCTTCTTTCTCCCGGCCCAAAACTAGAACGGGTCGTCGGACAA ATTGCCCTTCCTCACCGTATGCGCTGACTGTTCCGTCCCATGTTAGAGTG TAGCGGACGGCATCGAAGCGGCCCGCAAGATGTGTGGGGGGCACGGCTAC TCCCAGTTCAGCGGCCTGCCCGACCTGTCCTCGGGGTACCTTGCGCTCGC GACGCTGGAGGGCACCCAGCAGGTTCTGGAGCCTCAGACTGCCAGGCAAG CAAGAGTTTTTTTGTGTGCACGCTGCTTGACAGGACATCGTTGCGTTGCA AGCGTGTTTGGCGTGCCTGCTTGCTTGCTTGTCGTTGACGTGACCGGTGC TGAACCTTGCGTTGTGGTATGCATCGAATCCCTATCAGGGTACACACGTT GAGCATTGCAGTATTGCCCACCTCTGTTGTGTTTTCGGAAGAAGAAGGTC CTTCACGACCACTTTGTTCCCGTGTTTTTCCAAGACGACTGACTGTTCAC GACCACGTGCCCCCCCCCCCCTTCCCCCCCCAGGCATCTGCTGCGCTCCC TCGCCGCCGCCCGCAAGGGCAAGCGCTTGAGCGAGGCCTTCTCGTACCTC TCCCCGTCTTCTACCCAACAACAAGGCACCGCAACCACCAACACCACCTC GCCTGCCGTGAGCGTGAGGATAGGCGCCCAACTGAGGAGACCGGAGACCC AGCTGCGACTGTTCCGCGGCCGCGCCCGCGCTGCGGTGTTGGCGGCGGAG GAGGCGGTACAGCGGGGGGGGCAGGGGACCACTGGAGCGGGGGCTGGGCG GGAGGCTATGGTAGGGGCCGCGGTCGAGCTCGGAAGGTGAGAGCAGCCGC CGTGCTTGTTTTTTTGGCGAATGGCTTCGTGGGTGTACTAGCTGGGCAGC ACGACGACGGGGTAGTTTGACCGAATTGCGCGGAAGGGATGTTCACTTTT TTTTTCTTGTCAGTTTGGTTGTTGTTGGTGGTAGAACGTTGCGTTGTAAC GTGTTGTATTCCTTTTTTACCAATTTTGGTTAGGAAACCTTTGCTTGGTG CCCTGTGTCAGACCGTGCTGAAGTCGGGCTGGGCGGTTACGGCCGTCGGA AGGCAGCGAGTGGTCCTGTCCACCTTTCCTGCCCTTGTCTGTTTGTTTAG TACGCTGCTGCCCAAATGCGTGCCGCTATACATGTCTTCATTGTTTCGAT TCCAAAGGGAGCTAACGTTCAAGATCGATCAGAGTCCTCCTATCTTACTG TCCCACTTCTTTCTCCCTTTTGCACGTTGTGCTGCTTATCCTATCTCACC GCTCCCTTGTCCCTTTTGCACGTCGTGCTGATTATCCTCCTCCGGTCAGG GCTACCCGCGCGCACTGCCAGCTGCACCTCCTGGAGAGGTGCACGGCGGG GGTGGAGCAGCAGCGGGAAGCGGCGGCGGCGGCGGCGGCGAGCGGGGAGG AGCTCAACACCCGCGAGGTCAATGTCCTGTCGTCCCTGAGGGACTTGTTC GCGCTCTCCATCGTCGAAGAG
back to top

Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14879:66..2886+

>mRNA_E-fasciculatus_F_contig14879.3472.1 ID=mRNA_E-fasciculatus_F_contig14879.3472.1|Name=mRNA_E-fasciculatus_F_contig14879.3472.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1800bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14879:66..2886+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
GTCGCCTTTCGCTTCGGTGCCGTGAGGACACAGGGTTACGACGAGAGAGA
GGGCGCGTCGCCGGGGTCGGAGAGGCAGGTCGCCTTTCGCTTCGGTGCCG
TGAGGACACAGGGTTACGACGAGAGAGAGGGCGCGTCGCCGGGGTCGGAG
AGGCAGGTGTTGGACTACCCCACTCAACAGCGGATCCTCTTGCCGCTCCT
GGCTCACGCCTACGCGCTCCACTTCGCCGGACAGCACATGAAGTCCGCCT
ACCACTACTACCTCGACACCCAAGACGCGGAAGCCCTTCCAGACTTGCAC
GCCACAAGCGCTGGGCTTAAGTCTCTCGTAGCGCAGGTGTTGGACTACCC
CACTCAACAGCGGATCCTCTTGCCGCTCCTGGCTCACGCCTACGCGCTCC
ACTTCGCCGGACAGCACATGAAGTCCGCCTACCACTACTACCTCGACACC
CAAGACGCGGAAGCCCTTCCAGACTTGCACGCCACAAGCGCTGGGCTTAA
GTCTCTCGTAGCGCAGAGTGTAGCGGACGGCATCGAAGCGGCCCGCAAGA
TGTGTGGGGGGCACGGCTACTCCCAGTTCAGCGGCCTGCCCGACCTGTCC
TCGGGGTACCTTGCGCTCGCGACGCTGGAGGGCACCCAGCAGGTTCTGGA
GCCTCAGACTGCCAGGCAAGCAAGAGTTTTTTTAGTGTAGCGGACGGCAT
CGAAGCGGCCCGCAAGATGTGTGGGGGGCACGGCTACTCCCAGTTCAGCG
GCCTGCCCGACCTGTCCTCGGGGTACCTTGCGCTCGCGACGCTGGAGGGC
ACCCAGCAGGTTCTGGAGCCTCAGACTGCCAGGCAAGCAAGAGTTTTTTT
GCATCTGCTGCGCTCCCTCGCCGCCGCCCGCAAGGGCAAGCGCTTGAGCG
AGGCCTTCTCGTACCTCTCCCCGTCTTCTACCCAACAACAAGGCACCGCA
ACCACCAACACCACCTCGCCTGCCGTGAGCGTGAGGATAGGCGCCCAACT
GAGGAGACCGGAGACCCAGCTGCGACTGTTCCGCGGCCGCGCCCGCGCTG
CGGTGTTGGCGGCGGAGGAGGCGGTACAGCGGGGGGGGCAGGGGACCACT
GGAGCGGGGGCTGGGCGGGAGGCTATGGTAGGGGCCGCGGTCGAGCTCGG
AAGGCATCTGCTGCGCTCCCTCGCCGCCGCCCGCAAGGGCAAGCGCTTGA
GCGAGGCCTTCTCGTACCTCTCCCCGTCTTCTACCCAACAACAAGGCACC
GCAACCACCAACACCACCTCGCCTGCCGTGAGCGTGAGGATAGGCGCCCA
ACTGAGGAGACCGGAGACCCAGCTGCGACTGTTCCGCGGCCGCGCCCGCG
CTGCGGTGTTGGCGGCGGAGGAGGCGGTACAGCGGGGGGGGCAGGGGACC
ACTGGAGCGGGGGCTGGGCGGGAGGCTATGGTAGGGGCCGCGGTCGAGCT
CGGAAGGGCTACCCGCGCGCACTGCCAGCTGCACCTCCTGGAGAGGTGCA
CGGCGGGGGTGGAGCAGCAGCGGGAAGCGGCGGCGGCGGCGGCGGCGAGC
GGGGAGGAGCTCAACACCCGCGAGGTCAATGTCCTGTCGTCCCTGAGGGA
CTTGTTCGCGCTCTCCATCGTCGAAGAGGGCTACCCGCGCGCACTGCCAG
CTGCACCTCCTGGAGAGGTGCACGGCGGGGGTGGAGCAGCAGCGGGAAGC
GGCGGCGGCGGCGGCGGCGAGCGGGGAGGAGCTCAACACCCGCGAGGTCA
ATGTCCTGTCGTCCCTGAGGGACTTGTTCGCGCTCTCCATCGTCGAAGAG
back to top