mRNA_E-fasciculatus_F_contig14879.3472.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: D7FYQ4_ECTSI (Acyl-CoA oxidase, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYQ4_ECTSI) HSP 1 Score: 491 bits (1264), Expect = 2.050e-171 Identity = 282/306 (92.16%), Postives = 286/306 (93.46%), Query Frame = 1
Query: 1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGQGTTGAG----AGREAMVGAAVELGRATRAHCQLHLLERCTAGVEQQREAXXXXXA--SGEELNTREVNVLSSLRDLFALSIVEE 900
+AFRFGAVRTQGYDEREGASPGSERQVLDYPTQQR+LLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLV QSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTAR HLLRSLAAARKGKRLSEAFSYLSPSSTQQ G ATT TTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGG+GT GAG AGREAMVGAAVELGRATRAHCQLHL+ERC AGVEQQRE XXXXX SGEELNTREVNVLSSLRDLFALSIVEE
Sbjct: 68 IAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRVLLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLVTQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTAR------HLLRSLAAARKGKRLSEAFSYLSPSSTQQ-GAATT-TTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGKGTAGAGGGAAAGREAMVGAAVELGRATRAHCQLHLVERCMAGVEQQREXXXXXXXXXSGEELNTREVNVLSSLRDLFALSIVEE 365
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A6H5JQT9_9PHAE (ACOX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQT9_9PHAE) HSP 1 Score: 267 bits (682), Expect = 2.840e-85 Identity = 183/258 (70.93%), Postives = 186/258 (72.09%), Query Frame = 1
Query: 160 MKSAYHYYLDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGQGTTGAGAG----REAMVGAAVELGRATRAHCQLHLLERCTAGVEQQREAXXXXX-------ASGEELNTREVNVLSSLRDLFALSIVEE 900
MKSA+HYYLDTQDAEALPDLHATSAGLKSLV Q G D SS HLLRSLAAAR+GKRLSEAFSYLSPS TQQ G ATT TTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQR GQGT GAG G REAMVGAAVELGRATRAHCQLHL+ERCTAGVEQQRE XXXXX ASGEELNTREVNVLSSLRDLFALSIVEE
Sbjct: 1 MKSAFHYYLDTQDAEALPDLHATSAGLKSLVTQV---------------------GEKDGSS---------------------------HLLRSLAAAREGKRLSEAFSYLSPSPTQQ-GAATT-TTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQREGQGTAGAGGGAAAWREAMVGAAVELGRATRAHCQLHLVERCTAGVEQQREXXXXXXXXXXXXVASGEELNTREVNVLSSLRDLFALSIVEE 208
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A836CMS5_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMS5_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.610e-65 Identity = 158/301 (52.49%), Postives = 178/301 (59.14%), Query Frame = 1
Query: 1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEA-FSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGQGTTGAGA-GREAMVGAAVELGRATRAHCQLHLLERCTAGVEQQREAXXXXXASGEELNTREVNVLSSLRDLFALSIVE 897
+A RF AVR QG+ EG + ER VLDYPTQQR L PLLA+AYALHF G+ M+ Y YL T D ALP LHATSAGLK+LV Q+VADGIE ARK+CGGHGYS SGLPD S+ YLAL TLEGTQQVLEPQ AR LLR LAAAR+G A YL+ G A+ L P QLRLF+ RA AVLA + AV T AG EA+ A E GRA RAHCQLHLL+ A V Q +A +N RE VL L LFALS +E
Sbjct: 306 IAIRFSAVRRQGF-AGEGTATADERPVLDYPTQQRGLFPLLAYAYALHFTGERMRVDYEAYLHTLDQGALPALHATSAGLKALVTQTVADGIETARKLCGGHGYSHASGLPDASANYLALPTLEGTQQVLEPQMAR------FLLRGLAAARRGGGAPPAGCEYLASERQLLAGGASG----------AALDLLDPAVQLRLFQRRALVAVLALQVAVAE----LTAAGVDAAEALGRRAAEAGRAARAHCQLHLLQHFAAAV-QALQAQASAGPCAAVINEREAAVLRDLCSLFALSTIE 584
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A7S2UUA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUA8_9STRA) HSP 1 Score: 170 bits (431), Expect = 1.390e-47 Identity = 115/262 (43.89%), Postives = 155/262 (59.16%), Query Frame = 1
Query: 1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVL----AAEEAVQRGGQGTTGAGAGREAMVGAAVELGRATRAHCQLHLLERCT 774
++ R+ R QG+ E EG++ +E +VLDYPTQQ L PLLA AYALHF GQ K+ Y YL T D LP +HA+S+GLK+ Q V DGIEA RKMCGGHGYS G+P+L YLA+ TLEGTQQVLEPQT R +L+R+L AAR +++ ++ Q ++ T ++ L P+ Q++LF RA A + A +A++RG + + + G VELGRA++AHCQL LL T
Sbjct: 58 ISVRYSVARKQGFKE-EGST--AEHKVLDYPTQQATLFPLLATAYALHFMGQKFKTQYTSYLQTFDMTVLPGIHASSSGLKAYSMQMVCDGIEACRKMCGGHGYSLACGIPELLGNYLAMCTLEGTQQVLEPQTGR------YLIRALQAARTSDNVNQEPIFVYDPELQHLKSSKTWDYVQCGAISKDCFLN-PKLQVQLFEVRAARAAMQAGGAVHQAIKRGEKSSWLSSCG--------VELGRASKAHCQLLLLREFT 301
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A7S3XZT9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZT9_HETAK) HSP 1 Score: 146 bits (368), Expect = 8.650e-40 Identity = 89/159 (55.97%), Postives = 106/159 (66.67%), Query Frame = 1
Query: 13 FGAVRTQGYDEREGASPGS------ERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEA--LPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGK 465
+ VR QG+ +GA G ER VLDYPTQ+R LLPL+A A+ALHF G + +Y YL + EA LP LHA SAGLK+LV ++ GIE R+MCGGHGY+Q SGL +L + LA TLEGTQQVLEPQTAR HLLR+ AAARKGK
Sbjct: 1 YSVVRAQGF-LGDGAGAGGKAAAAEERVVLDYPTQRRALLPLVAWAFALHFQGAAFRGSYERYLADPEGEAPALPGLHAASAGLKALVTGALHAGIETCRRMCGGHGYAQSSGLWELHNDTLAFVTLEGTQQVLEPQTAR------HLLRARAAARKGK 152
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A4D9DB85_9STRA (Acyl-coenzyme A oxidase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DB85_9STRA) HSP 1 Score: 143 bits (361), Expect = 8.280e-35 Identity = 107/266 (40.23%), Postives = 136/266 (51.13%), Query Frame = 1
Query: 1 VAFRFGAVRTQGYDE----REGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYLDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLSP---SSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQ---RGGQGTTGAGAGREAMVGAAVELGRATRAHCQLHLLER 768
VA R+ AVR QGY + S E QVLDYPTQQ L+PLLA ++AL GQ M+ Y YL D LP++HA S+GLK+L + V+ G++ R+MCGGHGY SGLP++ S Y A+ T EGT QVLEPQ AR L L + KG A + +P SS T P Q+ + R A +L A E V+ RGG+G A +M+ V GR +RAHCQL LL R
Sbjct: 318 VAIRYSAVRRQGYAPSPPGKLSQSAPLELQVLDYPTQQHALMPLLAWSFALQITGQFMRRRYKAYLRELDLSLLPEVHALSSGLKALTGEVVSQGVDVCRRMCGGHGYLLASGLPEVFSNYTAVQTFEGTAQVLEPQLAR---FILRLSMAPTERPKGSGRGAATAAKAPFALSSDFDYVPLAAGKTFVRCRAATPVAFLDPAFQIEAYEARVSALLLLAREEVEADLRGGEGGLAA-----SMMKNGVLFGRLSRAHCQLVLLRR 575
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A2P6N7N5_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N7N5_9EUKA) HSP 1 Score: 134 bits (336), Expect = 2.280e-31 Identity = 111/305 (36.39%), Postives = 156/305 (51.15%), Query Frame = 1
Query: 1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYL---DTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGQGTTGAGAGREAMVG---AAVELGRATRAHCQLHLLERCTAGVEQQREAXXXXXASGEELNTREVNVLSSLRDLFALSIVE 897
+A R+ VR QG + + A E ++++Y +QQ LLPLL+HA+A+HF G ++ Y L D D LP +HAT++GLK+ V ADGIE ARK CGGHGYSQFSGLP L + Y+ T EG VL QTAR L++SL AA GK L+ + +YL +G + + G L P+ QL+ F RA ++ A + ++ T AG++ + ++L RA RAH + +L VE A+ +E N R VL L DLF L +E
Sbjct: 317 IAIRYSCVREQGMVQPKQAG---ETKLMNYKSQQYRLLPLLSHAFAIHFTGFYILDMYKDLLRRLDGSDFSTLPVIHATTSGLKAYVTTVAADGIEEARKCCGGHGYSQFSGLPTLFADYVPSCTFEGDNWVLFQQTAR------FLIKSLKAAVAGKPLAASVAYLKGYRAVGEGQKS--------QAKSGQDLLIPQVQLKAFEHRATRLIMEAAQLLE------TDRKAGKQYEISWNAHMIDLIRAARAHTLVVILTAFIERVE----------ATTDEKNKR---VLKKLCDLFCLYNIE 585
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A0L0DVV4_THETB (Acyl-coenzyme A oxidase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DVV4_THETB) HSP 1 Score: 129 bits (323), Expect = 8.530e-30 Identity = 81/168 (48.21%), Postives = 97/168 (57.74%), Query Frame = 1
Query: 1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYY---LDTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLS 495
+A R+ AVR QG G E VLDY QQ LL LLA AYA HF G++M Y L+ D LP++HATSAGLKS+ ADGIE AR+ CGGHG+SQFSGLP L + Y+ T EG VL QTAR +L++S A GK LS +YLS
Sbjct: 310 IAIRYSAVRRQGTTR---GRDGGEMVVLDYTMQQHRLLILLATAYAFHFTGEYMMELYRRLQADLEDNDLSVLPEVHATSAGLKSMTTTVTADGIEEARRACGGHGFSQFSGLPYLYTWYVPAVTYEGDNVVLALQTAR------YLIKSCRQAADGKPLSAGVAYLS 468
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: L8GFT5_ACACA (Acyl-coenzyme A oxidase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GFT5_ACACA) HSP 1 Score: 121 bits (303), Expect = 3.900e-27 Identity = 73/160 (45.62%), Postives = 97/160 (60.62%), Query Frame = 1
Query: 1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYL---DTQDAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRL 471
+A R+ AVR Q D A E+QVLDY QQ LLPLLA AYA HF G++M++ Y + + D ALP++HATSAGLK++ ADGIE RK CGGHGYS+F+G+ D+ Y+ T EG V+ QTAR +L+++ A KG+ L
Sbjct: 285 IAVRYSAVRRQFSD----ADNEPEKQVLDYRMQQYRLLPLLATAYAFHFTGRYMRNIYDELMRNIQSDDVSALPEVHATSAGLKAVTTWMTADGIEECRKCCGGHGYSKFAGISDIYVNYVPACTYEGDNVVMCLQTAR------YLVKTARGAAKGEPL 434
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Match: A0A1Y1HUL2_KLENI (Acyl-coenzyme A oxidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HUL2_KLENI) HSP 1 Score: 120 bits (302), Expect = 5.500e-27 Identity = 92/253 (36.36%), Postives = 124/253 (49.01%), Query Frame = 1
Query: 1 VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAGQHMKSAYHYYLDTQ---DAEALPDLHATSAGLKSLVAQSVADGIEAARKMCGGHGYSQFSGLPDLSSGYLALATLEGTQQVLEPQTARQARVFLHLLRSLAAARKGKRLSEAFSYLSPSSTQQQGTATTNTTSPAVSVRIGAQLRRPETQLRLFRGRARAAVLAAEEAVQRGGQGTTGAGAGREAMVGAAVELGRATRAHCQ 750
+A R+ AVR Q G G E Q+++Y TQQ L PLLA AYA F G+ M+ Y +D D LP++HA++AGLK+L ADGIE RK+CGG+GY SGLPDL Y+ T EG +L Q AR +L++ + G++ S A YL + S + A RPE QL RA V+ +Q GA +A+ +AVE+ R +RAHCQ
Sbjct: 301 IATRYNAVRRQF-----GGKVGLETQIIEYKTQQHRLFPLLASAYAFTFTGKWMRKLYTEVIDQLNRGDVSGLPEVHASTAGLKALTTSFTADGIEECRKLCGGNGYLMASGLPDLYCAYVPACTYEGDNYILFLQVAR------YLMKVASQLANGEKPSGAAQYLGDAQ---------RLCSVQCPAKSAADFLRPEVQLEALSARAARLVIGNGMRIQ-------GAKNFEKAIADSAVEMVRMSRAHCQ 526 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14879.3472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14879.3472.1 >prot_E-fasciculatus_F_contig14879.3472.1 ID=prot_E-fasciculatus_F_contig14879.3472.1|Name=mRNA_E-fasciculatus_F_contig14879.3472.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=300bp VAFRFGAVRTQGYDEREGASPGSERQVLDYPTQQRILLPLLAHAYALHFAback to top mRNA from alignment at E-fasciculatus_F_contig14879:66..2886+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14879.3472.1 ID=mRNA_E-fasciculatus_F_contig14879.3472.1|Name=mRNA_E-fasciculatus_F_contig14879.3472.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=2821bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14879:66..2886+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14879:66..2886+ >mRNA_E-fasciculatus_F_contig14879.3472.1 ID=mRNA_E-fasciculatus_F_contig14879.3472.1|Name=mRNA_E-fasciculatus_F_contig14879.3472.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=1800bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14879:66..2886+ (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |