prot_E-fasciculatus_F_contig1480.3430.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1480.3430.1
Unique Nameprot_E-fasciculatus_F_contig1480.3430.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length194
Homology
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BLAST of mRNA_E-fasciculatus_F_contig1480.3430.1 vs. uniprot
Match: D7FIX0_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIX0_ECTSI)

HSP 1 Score: 212 bits (540), Expect = 3.340e-60
Identity = 117/162 (72.22%), Postives = 130/162 (80.25%), Query Frame = 0 
Query:   31 RFLVLDNAVVLVYGSESDFADHEEPLDDVVLSGESVVETTRERGEVLVKLRGPDHSPLCF--SAGDVHNSATRPDSEAWEIAISREIAGLRGEPDTSRRPRTVAAARGRGGNRSWWPWNAARRGVGGESGKAEPSLIADPGVGGGSPNGTETDDSNHDETKH 190
            RFLVLD+AV+LVY S+SD+ADH+EPLDDVVLS ESVVETTRER   LVKLRGP HSPLCF  SA +V++S TRPDSEAWE+AIS+EIAGL G+  TSRRP TVAAARG  G RSW  WNA RR   G SGKA  +LIADP  GGGS + TE D SNHDETKH
Sbjct:   15 RFLVLDHAVLLVYASKSDWADHQEPLDDVVLSAESVVETTREREGALVKLRGPGHSPLCFTCSAVNVNDSTTRPDSEAWEVAISQEIAGLGGDAGTSRRPHTVAAARGGRGVRSWRLWNAVRRDAEGNSGKAGAALIADPAGGGGSVDATEKDGSNHDETKH 176
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BLAST of mRNA_E-fasciculatus_F_contig1480.3430.1 vs. uniprot
Match: A0A6H5K0W6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0W6_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 2.630e-33
Identity = 73/110 (66.36%), Postives = 83/110 (75.45%), Query Frame = 0 
Query:   78 VKLRGPDHSPLCF--SAGDVHNSATRPDSEAWEIAISREIAGLRGEPDTSRRPRTVAAARGRGGNRSWWPWNAARRGVGGESGKAEPSLIADPGVGGGSPNGTETDDSNH 185
            V++RGP HSPLCF  SA + ++S TRPDSEAWE+AISREIAGL     TSRR  TVAAARGRGG  SW  WN+ RRG GG+SGKAEP+LI D   GGG  + TE DDSNH
Sbjct:    6 VRVRGPGHSPLCFTCSAVNANDSTTRPDSEAWEMAISREIAGLGRGAGTSRRSHTVAAARGRGGVLSWRLWNSVRRGAGGDSGKAEPALITDSATGGGGVDATEKDDSNH 115
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1480.3430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIX0_ECTSI3.340e-6072.22Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5K0W6_9PHAE2.630e-3366.36Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1480contigE-fasciculatus_F_contig1480:13320..17831 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1480.3430.1mRNA_E-fasciculatus_F_contig1480.3430.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1480 13122..17831 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1480.3430.1 ID=prot_E-fasciculatus_F_contig1480.3430.1|Name=mRNA_E-fasciculatus_F_contig1480.3430.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=194bp
MSSARPIQGEVVLHRFPGLLGSLGWGRRHSRFLVLDNAVVLVYGSESDFA
DHEEPLDDVVLSGESVVETTRERGEVLVKLRGPDHSPLCFSAGDVHNSAT
RPDSEAWEIAISREIAGLRGEPDTSRRPRTVAAARGRGGNRSWWPWNAAR
RGVGGESGKAEPSLIADPGVGGGSPNGTETDDSNHDETKHEEEE
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