mRNA_E-fasciculatus_F_contig14775.3412.1 (mRNA) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
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Overview
Homology
BLAST of mRNA_E-fasciculatus_F_contig14775.3412.1 vs. uniprot
Match: A0A6H5JKZ1_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JKZ1_9PHAE) HSP 1 Score: 188 bits (477), Expect = 1.990e-58 Identity = 94/98 (95.92%), Postives = 95/98 (96.94%), Query Frame = 1
Query: 1 RDLKDEYVGLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYGASKAGDKIQRSTVLVDKEGKVAAVWNPVSGAEQHPVQVLAKLKEIMV 294
RDLKDEY LDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYGASKAGDKIQRSTVLVDKEGKVAAVWNPV GAEQHPVQVLAKLKEIM+
Sbjct: 142 RDLKDEYDRLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYGASKAGDKIQRSTVLVDKEGKVAAVWNPVIGAEQHPVQVLAKLKEIMM 239
BLAST of mRNA_E-fasciculatus_F_contig14775.3412.1 vs. uniprot
Match: A0A6H5J6N3_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J6N3_9PHAE) HSP 1 Score: 136 bits (343), Expect = 1.030e-38 Identity = 68/96 (70.83%), Postives = 78/96 (81.25%), Query Frame = 1
Query: 1 RDLKDEYVGLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYGASKAGD--KIQRSTVLVDKEGKVAAVWNPVSGAEQHPVQVLAKLK 282
RDL+ +Y LDC VLGVSAD E SH FIA GLNF LLADTD+SLI +YGA KA D KIQRSTV++DKEGKVAAVWNPV+ AE+HPV+VL K+K
Sbjct: 95 RDLQSDYDALDCVVLGVSADSEASHQDFIADLGLNFSLLADTDKSLINAYGAMKAEDENKIQRSTVVIDKEGKVAAVWNPVTAAEEHPVEVLEKIK 190
BLAST of mRNA_E-fasciculatus_F_contig14775.3412.1 vs. uniprot
Match: A0A7S2V4W9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4W9_9STRA) HSP 1 Score: 101 bits (252), Expect = 2.090e-25 Identity = 50/95 (52.63%), Postives = 65/95 (68.42%), Query Frame = 1
Query: 1 RDLKDEYVGLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYGASK--AGDKIQRSTVLVDKEGKVAAVWNPVSGAEQHPVQVLAKL 279
RDLK E+ +C +LGVSAD E SH +FIA++ NF LLADT R ++ +YGA G K+ RS+VL+ +G V AVWNPV A +HP +VLA L
Sbjct: 58 RDLKAEFDAKNCVILGVSADDEESHQRFIAEHSFNFHLLADTSRQMVGAYGAESDPPGVKVMRSSVLIGGDGLVRAVWNPVKNAGEHPDEVLAAL 152
BLAST of mRNA_E-fasciculatus_F_contig14775.3412.1 vs. uniprot
Match: A0A7S2V6E0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E0_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.350e-25 Identity = 53/97 (54.64%), Postives = 68/97 (70.10%), Query Frame = 1
Query: 1 RDLKDEYVGLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYGASKAGDKIQRSTVLVDKEGKVAAVWNPVSG-AEQHPVQVLAKLKEI 288
RDLK ++ +C +LGVSAD E SH KFI KY LNF LL+D R LIK++GAS AG+KI+RS+VLVD E VA W + A +HP +VL LK++
Sbjct: 32 RDLKSQFDDRNCKILGVSADSENSHKKFIGKYDLNFDLLSDPSRDLIKAFGASAAGNKIKRSSVLVDPELIVAKYWPQATPTAAKHPEEVLETLKDL 128
BLAST of mRNA_E-fasciculatus_F_contig14775.3412.1 vs. uniprot
Match: F0SF50_RUBBR (Peroxiredoxin n=1 Tax=Rubinisphaera brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / IAM 15109 / NBRC 103401 / IFAM 1448) TaxID=756272 RepID=F0SF50_RUBBR) HSP 1 Score: 85.1 bits (209), Expect = 8.030e-19 Identity = 47/103 (45.63%), Postives = 60/103 (58.25%), Query Frame = 1
Query: 1 RDLKDEYVGLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYGA-------SKAGDKIQRSTVLVDKEGKVAAVWNPVSGAEQHPVQVLAKLKEI 288
RD + G DC +LG+S D SH KF K+ L F LLAD D ++ + YG K G IQR+T L+DKEGKVAA+W V + H +V AKLKE+
Sbjct: 59 RDNLPRFEGEDCVILGISPDSVESHEKFAKKFELPFTLLADEDHAIAEKYGVWVEKNRFGKIGMGIQRATFLIDKEGKVAAIWPKVK-VDGHSEEVEAKLKEV 160
BLAST of mRNA_E-fasciculatus_F_contig14775.3412.1 vs. uniprot
Match: A0A2E1E1Y8_9CHLR (Peroxiredoxin n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E1E1Y8_9CHLR) HSP 1 Score: 85.5 bits (210), Expect = 9.680e-19 Identity = 41/94 (43.62%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 1 RDLKDEYVGLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYG----ASKAGDKIQRSTVLVDKEGKVAAVWNPVSGAEQHPVQVL 270
RDL E++ ++C V+G+SAD +VSH +F A+YGLNF LL+D + + K +G + K GD I R T L+++ G V VW + E HP VL
Sbjct: 85 RDLNAEFLKMNCEVIGISADSQVSHKEFSAQYGLNFNLLSDPNYNACKDFGTYFISEKFGDSILRQTFLINEVGLVLNVWKEIKDPENHPEDVL 178
BLAST of mRNA_E-fasciculatus_F_contig14775.3412.1 vs. uniprot
Match: A0A5Q4H613_9PLAN (Thioredoxin-dependent thiol peroxidase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A5Q4H613_9PLAN) HSP 1 Score: 83.6 bits (205), Expect = 2.910e-18 Identity = 50/103 (48.54%), Postives = 57/103 (55.34%), Query Frame = 1
Query: 1 RDLKDEYVGLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYGA-------SKAGDKIQRSTVLVDKEGKVAAVWNPVSGAEQHPVQVLAKLKEI 288
RD K E VLGVS D E H KF KY LNFRLLAD D + + YGA K IQRST L+D +GKVA VW V + H QVLA L+E+
Sbjct: 55 RDRKAELEARGAVVLGVSPDSEERHAKFRDKYDLNFRLLADADHQVAEKYGAWREKNMYGKKSMGIQRSTYLIDADGKVARVWQRVK-VDGHDEQVLAALQEL 156
BLAST of mRNA_E-fasciculatus_F_contig14775.3412.1 vs. uniprot
Match: A0A535A4C1_9DELT (Thioredoxin peroxidase n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A535A4C1_9DELT) HSP 1 Score: 82.8 bits (203), Expect = 5.550e-18 Identity = 50/103 (48.54%), Postives = 62/103 (60.19%), Query Frame = 1
Query: 1 RDLKDEYVGLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYGASKAGDKIQ---------RSTVLVDKEGKVAAVWNPVSGAEQHPVQVLAKLK 282
RD E L+ VLGVSAD E SH KFIAKY L F LL+D DR ++++YGA G+K+ RSTV + +GKV W VS A +HP QVLA L+
Sbjct: 54 RDAWKEIGKLEAVVLGVSADGEASHQKFIAKYKLPFPLLSDPDRKVMQTYGAY--GEKMMYGKKTVGVIRSTVWIGPDGKVRKHWARVSDAAKHPEQVLAALR 154
BLAST of mRNA_E-fasciculatus_F_contig14775.3412.1 vs. uniprot
Match: A0A0D8ZVQ0_9CYAN (Alkyl hydroperoxide reductase n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A0D8ZVQ0_9CYAN) HSP 1 Score: 82.4 bits (202), Expect = 6.160e-18 Identity = 47/93 (50.54%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 1 RDLKDEYVGLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYGASKAGDKIQRSTVLVDKEGKVAAVWNPVSGAEQHPVQVLAKL 279
RD +EY G D VLGVSAD EVSH +F KY LNF LLADTD+SLIK+Y G +R T ++D GK+ V + V+ H VLA L
Sbjct: 53 RDASNEYQGKDVVVLGVSADDEVSHQQFTQKYNLNFPLLADTDKSLIKAYDVD-GGGYAKRVTYVIDGNGKIVHVDSSVN-TSSHASDVLAAL 143
BLAST of mRNA_E-fasciculatus_F_contig14775.3412.1 vs. uniprot
Match: A0A518IX64_9BACT (Peroxiredoxin bcp n=4 Tax=Rosistilla TaxID=2795779 RepID=A0A518IX64_9BACT) HSP 1 Score: 80.9 bits (198), Expect = 3.360e-17 Identity = 47/104 (45.19%), Postives = 57/104 (54.81%), Query Frame = 1
Query: 1 RDLKDEYVGLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYGA-------SKAGDKIQRSTVLVDKEGKVAAVWN--PVSGAEQHPVQVLAKLKE 285
RD +E L VLGVS D SH KF +KY LNF LLAD D + ++YGA K IQRST ++D EGKVA VW V G +QH + + L E
Sbjct: 55 RDRCEEIQALGATVLGVSPDDTASHAKFRSKYELNFPLLADPDHKVAEAYGAWREKNMYGKISMGIQRSTFVIDAEGKVAKVWKRVKVDGHDQHVIDAIKALTE 158 The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig14775.3412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-fasciculatus_F_contig14775.3412.1 >prot_E-fasciculatus_F_contig14775.3412.1 ID=prot_E-fasciculatus_F_contig14775.3412.1|Name=mRNA_E-fasciculatus_F_contig14775.3412.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=99bp RDLKDEYVGLDCAVLGVSADHEVSHGKFIAKYGLNFRLLADTDRSLIKSYback to top mRNA from alignment at E-fasciculatus_F_contig14775:1986..3223- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-fasciculatus_F_contig14775.3412.1 ID=mRNA_E-fasciculatus_F_contig14775.3412.1|Name=mRNA_E-fasciculatus_F_contig14775.3412.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=mRNA|length=1238bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14775:1986..3223- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top Coding sequence (CDS) from alignment at E-fasciculatus_F_contig14775:1986..3223- >mRNA_E-fasciculatus_F_contig14775.3412.1 ID=mRNA_E-fasciculatus_F_contig14775.3412.1|Name=mRNA_E-fasciculatus_F_contig14775.3412.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=CDS|length=594bp|location=Sequence derived from alignment at E-fasciculatus_F_contig14775:1986..3223- (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)back to top |